Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0165900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:3878200:3881024:-1 gene:Os05g0165900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0165900-01)
Sequence

ATGACCACCCTGCTTTACATATCGCTTGGCTTTCTTCTCTTCTCCCTGCACGTTACTCCG
CCATGCTCTGCCGCCACGAATGATACTCTCGCGGCAGGCGAAGTGCTCGCCGTTGGTGAC
AAGCTTGTGTCAAGAAACGGCAGGTTCACGCTCGGCTTCTTCCAGCCAAGCGTCGTCGTT
AAGTCTGGCAACATCACCTCTCCCAATTGGTATGTTGGAATATGGTTCAGTAACATCTCA
GTTTTTACTACTGTCTGGGTTGCTAATAGGGATAGTCCAGTCACTGAACTCCAGCTCAAT
CAAACGCAGCTGAAACTATCAAAAGATGGCAACCTTGTCATCTCAAGCAATGCATCCATA
ATCTGGTCCAGTACTGTCAATAGGACATCAGCCACCACCATGAACAGCAGTACCAGTGTC
GTTCTCTCAAACGATGGAAACCTTGTGATAGGAAGCTCACCCAATGTGTTGTGGCAGAGC
TTTGACTATCCGTCAGATGTTTTGCTTCCTGGAGCCAAGTTTGGCTGGAATAAGGTCACT
GGCTTTACTCGTCGGTTCACATCAAAGAAGAACCTGATTGATCCAGGTCTTGGCTTGTAC
TATGTTGAGCTTGACAACACAGGGATTGACCTTAGCCGTAGTAACCCCCCAAATATGTAT
TGGTCTTGGTCATCTGAAAAGTCATCAAGTGCACTTATATCATTACTTAATCAGCTGATA
AACATAAATCCAGAGACTAAAGGTCGGATTAACATGACATATGTCAACAACAATGAAGAA
GAGTACTATGAATACATTTTATTGGATGAATCATATTATGCATATGTCTTGCTAGACATC
TCTGGGCAGATCGAGATAAATGTTTGGTCACAAGATACACAATCCTGGAAGCAGGTTTAT
GCCCAACCAGCTGATCCCTGCACGGCGTATGCTACTTGTGGACCTTTCACAATCTGCAAT
GGCATTGCACATCCATTCTGTGACTGTATGGAGAGCTTCTCTCAAAAGTCGCCTCGAGAT
TGGGAGCTTGATAATAGAACAGCAGGTTGCTCTAGAAACACTCCGTTAGATTGCAGTAAC
ACGACAAGCTCCACAGACGTGTTCCACACCATAGCTCGTGTTAGATTGCCCTACAACCCC
CAAATTGTAGACAATGCTACCACTCAGAGCAAATGTGCACAGGCTTGTCTCAGTTACTGC
TCCTGCAATGCCTATTCCTACGAAAATAGTAAATGCTCTATTTGGCATGGAGATTTGCTT
AGTGTAAATAGGAATGATGGCATTGATAATAGTTCTGAAGATGTTCTCTACCTTCGGCTT
GCCGCCAAAGATGTGCCAAGTTCGAGAAAAAACAAAATAAAGCCAATCGTTGCAGTTGTT
GCTGCAAGCATTGTCAGTTTGTTGGTAATGCTCATGCTGATCTTACTGGTATTAAGGAAG
AAACTAAGGTTCTGTGGCGCACAATTACACGACAGTCAATGTAGTGGTGGAATTGTGGCC
TTTAGATACAATGATTTATGTCATGCTACTAAAAATTTCTCTGAAAAGCTGGGAGGAGGT
GGTTTTGGTTCTGTATTCAAGGGAGTGCTAAGTGACTCGACTATTATAGCAGTGAAAAAG
CTTGACGGTGCTCGTCAGGGAGAGAAGCAATTCAGGGCTGAGGTGAGCTCAATTGGATTG
ATCCAACATATCAACCTTGTCAAATTGATTGGTTTCTGTTGCGAAGGTGATGAGAGACTA
CTTGTGTATGAACACATGGTAAATGGTTCTCTTGATGCCCATCTGTTTCAGAGCAAGGCT
ACTGTCCTGAATTGGACCACCAGGTATAACCTAGCCATAGGAGTTGCTAGAGGATTGTCC
TACTTGCATCAGAGCTGCAACGAATGCATCATACATTGTGATATTAAGCCAGAAAACATA
CTTCTCGATGCATCGTTTGCCCCTAAAATTGCAGACTTTGGGATGGCAGCATTTGTAGGA
AGGAACTTTAGCCGAGTTTTGACTACATTCAGAGGCACAGTAGGATATCTTGCTCCAGAG
TGGATTAGTGGAGTTGCTATTACACCAAAAGTTGATGTTTATAGCTTCGGTATGGTACTT
TTGGAAATCTTATCAGGAAGAAGGAATTCATATAAAGTTCATACTGATGACAATAGTGAT
CAAGTTGCCTTTTTCCCTGTGCAAGCCATTAGCAAGCTTCATGAGGGAGATGTCCAGAGT
TTGGTAGACCCGCAGTTAAATGGTGACTTCAGTCTAGTAGAGGTTGAAAGAGTTTGCAAA
GTTGCATGTTGGTGCATCCAAGAGAATGAGATTGATCGGCCAACAATGAATGAAGTGGTC
CGGGTTCTTGAGGGTTTACAGGAGCTTGATATGCCTCCAATGCCACGGCTACTTGCAGCT
TTAGCAGAATGCACTGTTGTGGCTCACTGTGATGATGATTCATAA

Peptide Sequence

PEP ID

Os05t0165900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:3878200:3881024:-1 gene:Os05g0165900 transcript:Os05t0165900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0165900-01)
Sequence

MTTLLYISLGFLLFSLHVTPPCSAATNDTLAAGEVLAVGDKLVSRNGRFTLGFFQPSVVV
KSGNITSPNWYVGIWFSNISVFTTVWVANRDSPVTELQLNQTQLKLSKDGNLVISSNASI
IWSSTVNRTSATTMNSSTSVVLSNDGNLVIGSSPNVLWQSFDYPSDVLLPGAKFGWNKVT
GFTRRFTSKKNLIDPGLGLYYVELDNTGIDLSRSNPPNMYWSWSSEKSSSALISLLNQLI
NINPETKGRINMTYVNNNEEEYYEYILLDESYYAYVLLDISGQIEINVWSQDTQSWKQVY
AQPADPCTAYATCGPFTICNGIAHPFCDCMESFSQKSPRDWELDNRTAGCSRNTPLDCSN
TTSSTDVFHTIARVRLPYNPQIVDNATTQSKCAQACLSYCSCNAYSYENSKCSIWHGDLL
SVNRNDGIDNSSEDVLYLRLAAKDVPSSRKNKIKPIVAVVAASIVSLLVMLMLILLVLRK
KLRFCGAQLHDSQCSGGIVAFRYNDLCHATKNFSEKLGGGGFGSVFKGVLSDSTIIAVKK
LDGARQGEKQFRAEVSSIGLIQHINLVKLIGFCCEGDERLLVYEHMVNGSLDAHLFQSKA
TVLNWTTRYNLAIGVARGLSYLHQSCNECIIHCDIKPENILLDASFAPKIADFGMAAFVG
RNFSRVLTTFRGTVGYLAPEWISGVAITPKVDVYSFGMVLLEILSGRRNSYKVHTDDNSD
QVAFFPVQAISKLHEGDVQSLVDPQLNGDFSLVEVERVCKVACWCIQENEIDRPTMNEVV
RVLEGLQELDMPPMPRLLAALAECTVVAHCDDDS

Transcript Sequence

Transcript ID

Os05t0165900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:3878200:3881024:-1 gene:Os05g0165900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Serine/threonine protein kinase-related domain containing protein. (Os05t0165900-01)
Sequence

GCTGAGCAGCACACAACACATATGTATACTTCCTCTCTGCTTTCTCCATCCCATTTTCTT
CGCCATGACCACCCTGCTTTACATATCGCTTGGCTTTCTTCTCTTCTCCCTGCACGTTAC
TCCGCCATGCTCTGCCGCCACGAATGATACTCTCGCGGCAGGCGAAGTGCTCGCCGTTGG
TGACAAGCTTGTGTCAAGAAACGGCAGGTTCACGCTCGGCTTCTTCCAGCCAAGCGTCGT
CGTTAAGTCTGGCAACATCACCTCTCCCAATTGGTATGTTGGAATATGGTTCAGTAACAT
CTCAGTTTTTACTACTGTCTGGGTTGCTAATAGGGATAGTCCAGTCACTGAACTCCAGCT
CAATCAAACGCAGCTGAAACTATCAAAAGATGGCAACCTTGTCATCTCAAGCAATGCATC
CATAATCTGGTCCAGTACTGTCAATAGGACATCAGCCACCACCATGAACAGCAGTACCAG
TGTCGTTCTCTCAAACGATGGAAACCTTGTGATAGGAAGCTCACCCAATGTGTTGTGGCA
GAGCTTTGACTATCCGTCAGATGTTTTGCTTCCTGGAGCCAAGTTTGGCTGGAATAAGGT
CACTGGCTTTACTCGTCGGTTCACATCAAAGAAGAACCTGATTGATCCAGGTCTTGGCTT
GTACTATGTTGAGCTTGACAACACAGGGATTGACCTTAGCCGTAGTAACCCCCCAAATAT
GTATTGGTCTTGGTCATCTGAAAAGTCATCAAGTGCACTTATATCATTACTTAATCAGCT
GATAAACATAAATCCAGAGACTAAAGGTCGGATTAACATGACATATGTCAACAACAATGA
AGAAGAGTACTATGAATACATTTTATTGGATGAATCATATTATGCATATGTCTTGCTAGA
CATCTCTGGGCAGATCGAGATAAATGTTTGGTCACAAGATACACAATCCTGGAAGCAGGT
TTATGCCCAACCAGCTGATCCCTGCACGGCGTATGCTACTTGTGGACCTTTCACAATCTG
CAATGGCATTGCACATCCATTCTGTGACTGTATGGAGAGCTTCTCTCAAAAGTCGCCTCG
AGATTGGGAGCTTGATAATAGAACAGCAGGTTGCTCTAGAAACACTCCGTTAGATTGCAG
TAACACGACAAGCTCCACAGACGTGTTCCACACCATAGCTCGTGTTAGATTGCCCTACAA
CCCCCAAATTGTAGACAATGCTACCACTCAGAGCAAATGTGCACAGGCTTGTCTCAGTTA
CTGCTCCTGCAATGCCTATTCCTACGAAAATAGTAAATGCTCTATTTGGCATGGAGATTT
GCTTAGTGTAAATAGGAATGATGGCATTGATAATAGTTCTGAAGATGTTCTCTACCTTCG
GCTTGCCGCCAAAGATGTGCCAAGTTCGAGAAAAAACAAAATAAAGCCAATCGTTGCAGT
TGTTGCTGCAAGCATTGTCAGTTTGTTGGTAATGCTCATGCTGATCTTACTGGTATTAAG
GAAGAAACTAAGGTTCTGTGGCGCACAATTACACGACAGTCAATGTAGTGGTGGAATTGT
GGCCTTTAGATACAATGATTTATGTCATGCTACTAAAAATTTCTCTGAAAAGCTGGGAGG
AGGTGGTTTTGGTTCTGTATTCAAGGGAGTGCTAAGTGACTCGACTATTATAGCAGTGAA
AAAGCTTGACGGTGCTCGTCAGGGAGAGAAGCAATTCAGGGCTGAGGTGAGCTCAATTGG
ATTGATCCAACATATCAACCTTGTCAAATTGATTGGTTTCTGTTGCGAAGGTGATGAGAG
ACTACTTGTGTATGAACACATGGTAAATGGTTCTCTTGATGCCCATCTGTTTCAGAGCAA
GGCTACTGTCCTGAATTGGACCACCAGGTATAACCTAGCCATAGGAGTTGCTAGAGGATT
GTCCTACTTGCATCAGAGCTGCAACGAATGCATCATACATTGTGATATTAAGCCAGAAAA
CATACTTCTCGATGCATCGTTTGCCCCTAAAATTGCAGACTTTGGGATGGCAGCATTTGT
AGGAAGGAACTTTAGCCGAGTTTTGACTACATTCAGAGGCACAGTAGGATATCTTGCTCC
AGAGTGGATTAGTGGAGTTGCTATTACACCAAAAGTTGATGTTTATAGCTTCGGTATGGT
ACTTTTGGAAATCTTATCAGGAAGAAGGAATTCATATAAAGTTCATACTGATGACAATAG
TGATCAAGTTGCCTTTTTCCCTGTGCAAGCCATTAGCAAGCTTCATGAGGGAGATGTCCA
GAGTTTGGTAGACCCGCAGTTAAATGGTGACTTCAGTCTAGTAGAGGTTGAAAGAGTTTG
CAAAGTTGCATGTTGGTGCATCCAAGAGAATGAGATTGATCGGCCAACAATGAATGAAGT
GGTCCGGGTTCTTGAGGGTTTACAGGAGCTTGATATGCCTCCAATGCCACGGCTACTTGC
AGCTTTAGCAGAATGCACTGTTGTGGCTCACTGTGATGATGATTCATAAGTACTTCCTAG
TTGATGTTAATAATATTTGTCTTAGAAAATTTTGAGGTTCTAACATGAGTGGAAGAAAAG
GAATGTAAGCTGGGTAGTGCTAAATTGTAACGCATTTTTTCAATAACCAATTGTTGTAAG
CAGGCATTACAGCAAAGATTTGGCAGAAATAGAGATACATGCCCGATGCCTATGTTTTGT
TGATGGTCTAGTTGGCATATATTGTTAAACTCAACAAGTTAATCTATGCCACTACTTGCT
GCATGCTTGCTTCAGAGATGTCAGTTCTAAAAAAATAAAAAATTTACTGCATGCTTGCTT
CAGAG