Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0165200-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:3832980:3833802:1 gene:Os05g0165200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0165200-00)
Sequence

ATGGGCAACAGCCTGAGATGCTGCCTAGCTTGCGTCCTCCCCTGCGGCGCCCTCGACCTG
ATCAGGATCGTCCACCTCAACGGCCGCGTCGAGGAGTACGGGCGCCCGGTCGCCGCCGGC
GAGATCCTCGCCGCCAACCCCAACCACGTCCTCAGCAAGCCGTGCTGCTCCCAGGGCGGC
GCCGTCGCCGTGCGCAGGACGATCCTCATCGTCTCGCCGGACTCCGAGCTGGAGCGCGGC
GAGATCTACTTCCTCATCCCGGCCTCCTCCGTGCCGGACAAAAAGAAGAAGAGCGGCGGC
GGCGCCGCCGCGGCGACGCCGGCGGCGAGCGGCCGCCACGGCAAGAGCAAGCAGGCGGCG
CCGTCGTCGGATCACGGGGGCAATGGCCGTCGTCACGTGCGCGACGTGTCGTCGGAGAAG
AGGTCGTCGTCGTTGCACCGGCGGCGCATGAGCGCCGGCAGCCGGACGGCGGCGTGGAGG
CCACACCTCGAGTGCATCGTAGAGGACACTTGA

Peptide Sequence

PEP ID

Os05t0165200-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:3832980:3833802:1 gene:Os05g0165200 transcript:Os05t0165200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0165200-00)
Sequence

MGNSLRCCLACVLPCGALDLIRIVHLNGRVEEYGRPVAAGEILAANPNHVLSKPCCSQGG
AVAVRRTILIVSPDSELERGEIYFLIPASSVPDKKKKSGGGAAAATPAASGRHGKSKQAA
PSSDHGGNGRRHVRDVSSEKRSSSLHRRRMSAGSRTAAWRPHLECIVEDT

Transcript Sequence

Transcript ID

Os05t0165200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:3832980:3833802:1 gene:Os05g0165200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os05t0165200-00)
Sequence

GCAAACTTAAGCTAGAGAGAGAGAGGTTAATTAAGAAGATTAATTACAATGGGCAACAGC
CTGAGATGCTGCCTAGCTTGCGTCCTCCCCTGCGGCGCCCTCGACCTGATCAGGATCGTC
CACCTCAACGGCCGCGTCGAGGAGTACGGGCGCCCGGTCGCCGCCGGCGAGATCCTCGCC
GCCAACCCCAACCACGTCCTCAGCAAGCCGTGCTGCTCCCAGGGCGGCGCCGTCGCCGTG
CGCAGGACGATCCTCATCGTCTCGCCGGACTCCGAGCTGGAGCGCGGCGAGATCTACTTC
CTCATCCCGGCCTCCTCCGTGCCGGACAAAAAGAAGAAGAGCGGCGGCGGCGCCGCCGCG
GCGACGCCGGCGGCGAGCGGCCGCCACGGCAAGAGCAAGCAGGCGGCGCCGTCGTCGGAT
CACGGGGGCAATGGCCGTCGTCACGTGCGCGACGTGTCGTCGGAGAAGAGGTCGTCGTCG
TTGCACCGGCGGCGCATGAGCGCCGGCAGCCGGACGGCGGCGTGGAGGCCACACCTCGAG
TGCATCGTAGAGGACACTTGAGAGAGAGAGAGAGAGACGGAGAGAGCTTAGCACTAGGGG
GTTGATGGTGTTTTGCATGGGTGTCATCTTCTCACTTGAGTGCATGGTTAATTTCCATGT
TTTTCTTTTCTATTTTTTTTGTAAGTGTACATCCATGTAATGTTTTACCCTTGCTAGTAT
ATATATATGATGAACATGTAGAGGAAGGGTTGTG