Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0164900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:3813306:3819768:-1 gene:Os05g0164900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch repeat type 1 domain containing protein. (Os05t0164900-01)
Sequence	GCACTGCGCTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAG TCACCGCAACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGC TGCTTTTTCTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCAT TCGCCGAGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTA AACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATA TTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCT TCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAAT TATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATT GATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGT ATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGT GACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCT TTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCG AGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGAC CAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCA GGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGA AGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAAT GTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCA TACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCT GTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCAT TCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTC TCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGA CAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCT GAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCA CAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAAT GTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTT TCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCA GAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATAT GTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAA GAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAG GATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCA AGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCT TGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGC CAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACA CAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAAT GTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATT TCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCA AATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACAT GTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAAT ACATCTCTTGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGACTTAATC AAGAAGACTGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTG AAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAG TTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGAC AAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGAT GCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCA TATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGAT TCATTTGGTAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCC TGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAATATATGCT ATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTT GGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAA ATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCA GAAAGGTATGACCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGA GGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGG GATAGAATGGTGTCTAGCGTAGAGATCTTTGACCCACGTCGCAACTCCTGGAGGGTGGGT GATCCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTT GTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTG AAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCT GCTGTCGTTTAA

Peptide Sequence

PEP ID	Os05t0164900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:3813306:3819768:-1 gene:Os05g0164900 transcript:Os05t0164900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch repeat type 1 domain containing protein. (Os05t0164900-01)
Sequence	ALRCSRGCYCYTQPTPSHTQSPQRKEKKAAKRRKRERKRRCFFFFLSSNHSGIGERIKYH SPRVLEEREANGLTMQGQHLNSQTVDLARNLRENQLGGVIFGCKHNTIEECFEKQLFGLP SVHYSYVRNVKPGLPLFLFNYSDRKLHGIFEAASPGQMCIDPYAWSHDGSLRTSFPAQVR ICTKTRYPPLMESQFRTVLGDNYYNHHHFYFELDHAQTKALIAVFKSLAPANFTQVPAVS SKRTIAPLPSTKRQAPVIPDQKKGSASPKDINPFSVLSQSGGAVKDNWADSDVENGSISR SSDEKESRELVSDWEDLDDNVLHGQLGLCSNPDEISQNSSYNSVAKGAEFVECSHLVVNP VNGGIQSSDGDMLVISDDVHSGAVGVDGIESGGQNEPDDVSIQPERLSILQKLKELFVLR QQAVLSDQNLAYSNSDEYAPEETQANVSLSCPEQCAPEEPQANTTPSCPELHVLEETQAN VSLLCPEQYVPEEPQANASLSCPEQHVPEEPQANASLSCPEQHVLEETQPNVSLPCPGQY VPEEPQANASLSCPEQHVPEEIQANASLPCPDQHVPEEPQDDASFSCPEQHVPEETQTNA SLPCPDQHVPEETQDDASFSCPEQHVPEETQANASLPCPGQHVPDNASLPCPEQHVPEET QINAGLSCPDQHLPEETKFNVSLAYPDQHVPEETQVTAGISCPDQHVPEETQVNASLPSP NQHVPEETKATAAISCPDQHVTQANASLSQHEFGAKVEDNTSLEQNQGNAELIKIVLDLI KKTDSLDMRQNKSHEEILSLKEVVKDSGTKVKQLEYRIDELQFKLDSSLSLVGDACDTLD KPSIFLIGGYNGVSWLSSLDAFSPEKDILVPLAPLSSARSYASVATLEGCIFVCGGGVGD SFGNTVECYNTMCNEWMACPCLNNKKGSLAAVSLDGKIYAIGGGDGIVTYSDVEMFDPFL GKWICSPSMMNSRFALGAAEMNSVIYATGGFDGFSYLQSAERYDPREGFWARLPSMNVRR GCHTVAALGGVLYAIGGYNGDRMVSSVEIFDPRRNSWRVGDPMNFPRGYASTVTLGDNVF VIGGLQSSEKFMDSVEVYNVKCGWSVPGFSSIGVRCFASAAVV

Transcript Sequence

Transcript ID	Os05t0164900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3813306:3819768:-1 gene:Os05g0164900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Kelch repeat type 1 domain containing protein. (Os05t0164900-01)
Sequence	GCACTGCGCTGCAGCCGCGGCTGCTACTGCTACACGCAACCAACCCCCTCACACACACAG TCACCGCAACGCAAGGAGAAAAAAGCAGCGAAGCGGAGGAAGAGAGAAAGAAAGCGACGC TGCTTTTTCTTCTTTCTTTCTTCCAACCACTCCGGGATCGGGGAGCGAATCAAATATCAT TCGCCGAGGGTGCTGGAGGAGAGAGAGGCCAACGGTCTCACAATGCAGGGGCAGCATCTA AACAGCCAGACTGTGGATCTTGCCCGCAATCTTCGGGAAAACCAGCTAGGAGGAGTGATA TTTGGTTGCAAGCACAATACAATCGAGGAATGCTTCGAAAAACAGCTATTTGGTCTGCCT TCAGTCCACTATTCATATGTGAGAAATGTGAAACCTGGACTACCTTTATTCCTATTCAAT TATAGTGACAGAAAGCTTCATGGCATTTTCGAGGCTGCAAGTCCTGGGCAGATGTGTATT GATCCATATGCGTGGAGTCATGATGGTTCTTTGAGGACTTCTTTTCCTGCACAGGTTCGT ATCTGCACGAAGACTCGTTATCCACCATTGATGGAGAGCCAATTCAGAACAGTGCTTGGT GACAACTATTATAACCACCACCACTTCTATTTTGAGCTAGACCATGCCCAAACAAAAGCT TTGATTGCTGTGTTCAAATCACTTGCTCCTGCCAATTTCACGCAAGTTCCAGCGGTTTCG AGCAAAAGGACTATTGCACCTTTACCATCAACTAAAAGGCAGGCACCTGTTATCCCTGAC CAAAAGAAAGGGTCAGCCAGTCCAAAGGACATCAATCCGTTTAGTGTTCTGTCACAATCA GGTGGTGCTGTTAAAGATAACTGGGCTGATTCTGATGTGGAGAATGGCAGTATTAGCAGA AGTTCAGATGAGAAGGAATCTAGGGAGCTAGTTTCTGATTGGGAGGATTTGGATGACAAT GTTCTTCACGGCCAACTTGGTCTTTGTTCAAATCCAGATGAGATCAGTCAAAACTCCTCA TACAACAGTGTTGCTAAGGGAGCGGAGTTTGTGGAATGCAGTCATTTGGTTGTCAATCCT GTGAATGGAGGAATCCAAAGTTCTGATGGAGACATGCTTGTGATCTCAGATGATGTGCAT TCAGGTGCTGTGGGTGTTGATGGGATAGAGAGTGGGGGTCAGAATGAACCAGATGATGTC TCGATACAGCCTGAAAGACTGTCCATCCTGCAAAAACTTAAGGAGTTGTTTGTTCTACGA CAACAGGCAGTGCTATCTGATCAAAATCTTGCATATTCTAATTCAGATGAATATGCACCT GAAGAAACACAGGCCAATGTGAGCCTTTCTTGTCCAGAGCAATGTGCACCTGAAGAACCA CAGGCCAATACAACCCCTTCTTGTCCAGAGCTACATGTACTTGAAGAAACACAGGCCAAT GTGAGCCTTCTTTGTCCAGAGCAATATGTACCTGAAGAACCACAGGCCAATGCAAGCCTT TCTTGTCCAGAGCAACATGTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCA GAGCAACATGTGCTTGAAGAAACACAGCCCAATGTGAGCCTTCCTTGTCCAGGGCAATAT GTACCTGAAGAACCACAGGCCAATGCAAGCCTTTCTTGTCCAGAGCAACATGTACCTGAA GAAATACAAGCCAATGCAAGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAACCACAG GATGATGCAAGTTTTTCTTGTCCAGAGCAACATGTACCTGAAGAAACACAGACCAATGCA AGCCTTCCTTGTCCAGATCAGCATGTACCTGAAGAAACACAGGATGATGCAAGCTTTTCT TGTCCAGAGCAACATGTACCTGAAGAAACACAGGCCAATGCAAGCCTTCCTTGTCCTGGC CAGCATGTACCTGACAATGCAAGCCTTCCTTGTCCAGAGCAACATGTGCCTGAAGAAACA CAGATCAATGCAGGTCTTTCTTGTCCAGATCAGCATCTTCCCGAAGAAACAAAGTTCAAT GTCAGTCTTGCCTATCCAGATCAGCATGTACCAGAGGAAACACAGGTCACTGCAGGCATT TCTTGCCCAGATCAGCATGTTCCTGAAGAAACACAGGTCAATGCAAGCCTTCCCTCTCCA AATCAGCATGTACCAGAAGAAACAAAGGCCACCGCAGCCATTTCTTGTCCAGATCAACAT GTAACACAGGCCAATGCAAGCCTTTCTCAACACGAGTTCGGTGCTAAGGTGGAAGATAAT ACATCTCTTGAGCAAAATCAAGGAAATGCTGAGCTGATAAAAATCGTCCTTGACTTAATC AAGAAGACTGATTCATTGGATATGAGACAGAACAAGTCCCATGAAGAAATACTTTCTCTG AAGGAAGTAGTTAAAGACTCGGGAACAAAAGTAAAGCAACTGGAATACCGTATAGATGAG TTACAATTCAAACTTGACTCTTCACTGTCTCTTGTCGGAGATGCATGTGATACTCTGGAC AAGCCATCGATATTCCTGATAGGTGGTTATAATGGTGTGTCCTGGTTGTCATCTCTTGAT GCTTTTTCACCTGAGAAAGACATACTGGTGCCTCTCGCACCATTGAGTTCTGCTCGTTCA TATGCATCTGTTGCTACATTGGAGGGTTGCATATTCGTCTGTGGTGGTGGGGTTGGCGAT TCATTTGGTAACACAGTGGAATGCTATAATACAATGTGTAACGAGTGGATGGCGTGCCCC TGTTTGAACAATAAAAAGGGAAGTCTCGCTGCAGTAAGTCTGGATGGAAAAATATATGCT ATTGGTGGAGGAGATGGAATTGTAACTTATTCAGATGTTGAGATGTTTGATCCTTTTCTT GGGAAGTGGATATGCAGCCCGTCTATGATGAACTCTCGATTTGCTCTTGGTGCGGCAGAA ATGAACAGTGTCATCTATGCTACTGGTGGATTTGATGGTTTCAGCTACTTACAATCAGCA GAAAGGTATGACCCAAGGGAGGGTTTCTGGGCCCGGCTTCCAAGTATGAATGTAAGGAGA GGATGCCACACTGTAGCTGCCCTTGGAGGAGTCCTGTATGCCATTGGAGGGTATAATGGG GATAGAATGGTGTCTAGCGTAGAGATCTTTGACCCACGTCGCAACTCCTGGAGGGTGGGT GATCCCATGAACTTTCCAAGAGGATACGCCTCTACAGTTACCCTGGGTGACAATGTGTTT GTCATTGGCGGTCTACAGTCGAGTGAAAAGTTTATGGATTCTGTGGAAGTTTACAATGTG AAATGCGGCTGGTCAGTTCCTGGTTTCAGCTCGATTGGGGTGAGGTGCTTCGCGTCTGCT GCTGTCGTTTAAGCGTGTTAGAAGTACAGTGCTTGTCCCATCTCATCAGTTCTAACAATT TTGTGCCATGCAAGGAAACAAACCCTAATCGTGTTTTCCGACATTTTGAGGGTAAAAATT GCCCTTCTGCTGTGATTCCAGTTTCGTGTACAGCGAAAGTCAGCATAGTATGGAGCTCTA GGTAGTCAGTCACTTGTCCAAAGTTTAGATCCTCCTTTATATACCTGAATATTCACCTAC TGTTGAGAAACACCCTGTTTTATCAGGTACCATGTAAATCTCTTGGAATGCATTCCGGCT AAAAATTCTGAACTTATTAATC