Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0164200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:3772400:3773096:1 gene:Os05g0164200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0164200-01)
Sequence

ATGTCTGCTTCTTCTCCTGTTGCCTACGACGCCAATGTCCTCCTGGCCGCGGTCACCGCG
CTCTCGGCGGCCATCGCGTTCGTCGCCGCGCTCCACCTCTACGCCCGGTGTCTCCTGCGG
CGGCGCGTCGCCGGCGCCGGCGCCGGCGCCGCCGGCAACCCTCACGCGCTGCGCCGCCCG
GTGACCCCGGGCGGCAACTACGAGCTCGAGGTGATCAGCGTCGCGGCGTGCGCGCTGGAG
GGCGGCGGCCTGGACGCCAAGCAGCTGGGCGCGCTGCCGGTGTTCACGTGGGGGTCTTCT
TCTCCGGCGACGGCGGCGGCGGACGCCGCCGTGCAGTGCGCGGTGTGCCTCGGGGAGATG
GAGGACGGCGAGCTGGGGAGGCTGCTCCCGGCGTGCCGCCACGTGTTCCACGCCGAGTGC
ATCGACACGTGGCTCGCCGTGAGCTCGACGTGCCCGGTGTGCAGGGCGGCGGTGGGGGCG
GCGGAGGATGATGAGCCAGCGGCGGCTCCGGTCGCTGGCGTGTCGCCGGCGAGCTAG

Peptide Sequence

PEP ID

Os05t0164200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:3772400:3773096:1 gene:Os05g0164200 transcript:Os05t0164200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0164200-01)
Sequence

MSASSPVAYDANVLLAAVTALSAAIAFVAALHLYARCLLRRRVAGAGAGAAGNPHALRRP
VTPGGNYELEVISVAACALEGGGLDAKQLGALPVFTWGSSSPATAAADAAVQCAVCLGEM
EDGELGRLLPACRHVFHAECIDTWLAVSSTCPVCRAAVGAAEDDEPAAAPVAGVSPAS

Transcript Sequence

Transcript ID

Os05t0164200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:3772400:3773096:1 gene:Os05g0164200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os05t0164200-01)
Sequence

ACTAGATTGTGCCATCATGATTGCATGATTGATTGCACATTTGCATCATTTCCACTTGAC
TTGAGCCGTCATGTCTGCTTCTTCTCCTGTTGCCTACGACGCCAATGTCCTCCTGGCCGC
GGTCACCGCGCTCTCGGCGGCCATCGCGTTCGTCGCCGCGCTCCACCTCTACGCCCGGTG
TCTCCTGCGGCGGCGCGTCGCCGGCGCCGGCGCCGGCGCCGCCGGCAACCCTCACGCGCT
GCGCCGCCCGGTGACCCCGGGCGGCAACTACGAGCTCGAGGTGATCAGCGTCGCGGCGTG
CGCGCTGGAGGGCGGCGGCCTGGACGCCAAGCAGCTGGGCGCGCTGCCGGTGTTCACGTG
GGGGTCTTCTTCTCCGGCGACGGCGGCGGCGGACGCCGCCGTGCAGTGCGCGGTGTGCCT
CGGGGAGATGGAGGACGGCGAGCTGGGGAGGCTGCTCCCGGCGTGCCGCCACGTGTTCCA
CGCCGAGTGCATCGACACGTGGCTCGCCGTGAGCTCGACGTGCCCGGTGTGCAGGGCGGC
GGTGGGGGCGGCGGAGGATGATGAGCCAGCGGCGGCTCCGGTCGCTGGCGTGTCGCCGGC
GAGCTAGGTGTGTTGAGTATCAGTGTACATTCGATCACTTGCTAGAGTTTGTATCTATGC
ACTTGAAAACAAAATTCGGGTATTTTTTTTCTTTAGG