Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0162200-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:3652664:3663545:-1 gene:Os05g0162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0162200-01);Conserved hypothetical protein. (Os05t0162200-02)
Sequence	ATGTCGTCGTGGCTGAGGAGCGCGGTGAGCCGGGCGGGGCGGAGCGGCGTGGCCCGCGCC GTCAGGGGGTACGCCGACGCCGTCGCGCACCACGCCGGCCAGGCCGTCGCCGACATCCTC CAGGACCGCACGGACTACAAAAGTTTTAAGAAAACAGTAGCACGCTTGGAAGAGGCAGCA GTTTCATGCCGTGGAGGCGAAAGAGTTGAACTGTTAAGACGTTGGTTGGGAGCGTTACAA GACATAGAGGCTGAACTTAGCGGATCAGATTTGAAGGATCCAGAAGATCGTGATCCTTCT AGTGAAACAGATATTTCAAAAGCACCATTGGCTTTGTTTTATGATGCTGACATTGAAGGA GGGCCTATGAACTTCCGTGATGTATTCCTATACAGTCAAGCACTGGAGGGGATTACACTG TCCATGGTTCTTGAAGCTCCTTCTGAGGAAGAAGTTTCTCTTCTTTTGGAAATTTTTGGG CTGTGTCTTACTGGAGGGAAAGAAGTCAACAAGAAAATCATGGACACTGTACAAGACTTG GCCAAGGCGCTTTCAAATTACAAAGATGAAGTCCTGGTGAAGCGTGAAGAGCTACTTGAA TATACTCAGAGTGTCATTTCAGGGCTAAAGAGGAATGCTGACATTATGAGGATAGATGCT GAAACCCTCGAGTTGTGGAAAAAGCTAGATGAGAAGGAGAAATCACGAGCCCAGATAACT GAAGATCAAGATAAATCGTCAGGGAATATTTCTGTTGAAAACATTGAGGGTTTAAAAGAA GCACTTATTGAAGTCCGTTTGTGCTCTAGAGTGGAAGAACTTGTACTGAAGAAGAAGTCA ATATCACCTGGAGACTCTCTGGAGATCCATTCTCAGAAGATTGATAAATTAAAGATCTTG GCAGATTCCCTTGCGAATTCATCCTCCAAGGCAGAGCAGCGTATTTTGGAGAACAGGCGC CAGAAAGAAGATGCTCTGAACTTCCGTGTTAAGAAGGAGAATGAAGTGAGCACAGTTGAG AAGGAGGTGCTTGATGAGATTGCTGAATTGGAGAAGCAGAGAGATGAACTTGAGGCTCAG CTGAAAAAGGTCAATATATCACTAAATGCTGCTGCTGGACGCCTCAAGAAAACCAGGGAA GAGAGGGACCAATTTGATGAAGCAAACAATCAAATTATATTTAAATTAAAAACAAAGGAG GACGACCTCTCAAAATCTATCGCGTCATGTAATGTGGAAGCCAATGTAGTCAAGACCTGG ATCAATTTCCTCGAGGATACCTGGCAGCTCCAGTCAACATATAATGAACAGAAGGAAAAG AAAACATGTGATGAGTTGGAGAGATGTGTGAGTAGTTTTCTGAAGTTGACCAAACATCAC CTTTCAGTCTTCAAGGAGGTCCTAAGCCCGTCAATTGAGAGTATCCGAACATATGTGGAT AACTTGGTGGTCTTGAACTCAAGGGAAGAGACAAAACAAGATGAAGATGATGAAGCATCC GAGAAGACAAACCCACGAATAAGCCTTGAAGAGGAATATTTGGAAACTGAAAAGAAGATC ATAATTGCTTTAAGCATTGCTGATCACATAAAGAAGTTATTTTACTCTGAGCAATGGGCT AATTCTAGGAGAGATGATCCAGAGGTCAAGAACCTAATTGCCGAGATCGAGAAATTGAGG GGAGAATTTGAATCTATAGAAAGGCCAATGCTAAGCATAGAAGCTAATAAATCAAAGCCA CTACCTGAGGAGAGATCTGAATTGAGCCCTTCACCAATCCAGGCACCCGCTACGCCTAAG GCTGCACACGTCGACTCTCCAAAATCTCCCATGAAGCCCGAGCAGCATCTGAATCCTGAC AATGAGCTCGCAAACCTGGGAGCAGAACTTGGATCGGAGGACAGAGATTTTTCAGGTGAG GAGATTAACGGGTGGGAGTTCGATGAGCTCGAAGAGGACCTGAAAAACTGA

Peptide Sequence

PEP ID	Os05t0162200-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:3652664:3663545:-1 gene:Os05g0162200 transcript:Os05t0162200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0162200-01);Conserved hypothetical protein. (Os05t0162200-02)
Sequence	MSSWLRSAVSRAGRSGVARAVRGYADAVAHHAGQAVADILQDRTDYKSFKKTVARLEEAA VSCRGGERVELLRRWLGALQDIEAELSGSDLKDPEDRDPSSETDISKAPLALFYDADIEG GPMNFRDVFLYSQALEGITLSMVLEAPSEEEVSLLLEIFGLCLTGGKEVNKKIMDTVQDL AKALSNYKDEVLVKREELLEYTQSVISGLKRNADIMRIDAETLELWKKLDEKEKSRAQIT EDQDKSSGNISVENIEGLKEALIEVRLCSRVEELVLKKKSISPGDSLEIHSQKIDKLKIL ADSLANSSSKAEQRILENRRQKEDALNFRVKKENEVSTVEKEVLDEIAELEKQRDELEAQ LKKVNISLNAAAGRLKKTREERDQFDEANNQIIFKLKTKEDDLSKSIASCNVEANVVKTW INFLEDTWQLQSTYNEQKEKKTCDELERCVSSFLKLTKHHLSVFKEVLSPSIESIRTYVD NLVVLNSREETKQDEDDEASEKTNPRISLEEEYLETEKKIIIALSIADHIKKLFYSEQWA NSRRDDPEVKNLIAEIEKLRGEFESIERPMLSIEANKSKPLPEERSELSPSPIQAPATPK AAHVDSPKSPMKPEQHLNPDNELANLGAELGSEDRDFSGEEINGWEFDELEEDLKN

Transcript Sequence

Transcript ID	Os05t0162200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3652664:3663545:-1 gene:Os05g0162200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0162200-01);Conserved hypothetical protein. (Os05t0162200-02)
Sequence	TGCTAATGAAAACCCCAAAAAACCATCACTAAAACCACGCGAGGGAGGAGAGTAGGAGAC GACTCCAAAATCCAAATCCAGTGGTCGCCGTCGCCGTGGTCGGTGGGTGCCGCGCGGAAA CCCTAGCTTCCCCCGCGGGTGGAGGAGGAGGAGGAGGAGAGGGGGGAGATGTCGTCGTGG CTGAGGAGCGCGGTGAGCCGGGCGGGGCGGAGCGGCGTGGCCCGCGCCGTCAGGGGGTAC GCCGACGCCGTCGCGCACCACGCCGGCCAGGCCGTCGCCGACATCCTCCAGGACCGCACG GACTACAAAAGTTTTAAGAAAACAGTAGCACGCTTGGAAGAGGCAGCAGTTTCATGCCGT GGAGGCGAAAGAGTTGAACTGTTAAGACGTTGGTTGGGAGCGTTACAAGACATAGAGGCT GAACTTAGCGGATCAGATTTGAAGGATCCAGAAGATCGTGATCCTTCTAGTGAAACAGAT ATTTCAAAAGCACCATTGGCTTTGTTTTATGATGCTGACATTGAAGGAGGGCCTATGAAC TTCCGTGATGTATTCCTATACAGTCAAGCACTGGAGGGGATTACACTGTCCATGGTTCTT GAAGCTCCTTCTGAGGAAGAAGTTTCTCTTCTTTTGGAAATTTTTGGGCTGTGTCTTACT GGAGGGAAAGAAGTCAACAAGAAAATCATGGACACTGTACAAGACTTGGCCAAGGCGCTT TCAAATTACAAAGATGAAGTCCTGGTGAAGCGTGAAGAGCTACTTGAATATACTCAGAGT GTCATTTCAGGGCTAAAGAGGAATGCTGACATTATGAGGATAGATGCTGAAACCCTCGAG TTGTGGAAAAAGCTAGATGAGAAGGAGAAATCACGAGCCCAGATAACTGAAGATCAAGAT AAATCGTCAGGGAATATTTCTGTTGAAAACATTGAGGGTTTAAAAGAAGCACTTATTGAA GTCCGTTTGTGCTCTAGAGTGGAAGAACTTGTACTGAAGAAGAAGTCAATATCACCTGGA GACTCTCTGGAGATCCATTCTCAGAAGATTGATAAATTAAAGATCTTGGCAGATTCCCTT GCGAATTCATCCTCCAAGGCAGAGCAGCGTATTTTGGAGAACAGGCGCCAGAAAGAAGAT GCTCTGAACTTCCGTGTTAAGAAGGAGAATGAAGTGAGCACAGTTGAGAAGGAGGTGCTT GATGAGATTGCTGAATTGGAGAAGCAGAGAGATGAACTTGAGGCTCAGCTGAAAAAGGTC AATATATCACTAAATGCTGCTGCTGGACGCCTCAAGAAAACCAGGGAAGAGAGGGACCAA TTTGATGAAGCAAACAATCAAATTATATTTAAATTAAAAACAAAGGAGGACGACCTCTCA AAATCTATCGCGTCATGTAATGTGGAAGCCAATGTAGTCAAGACCTGGATCAATTTCCTC GAGGATACCTGGCAGCTCCAGTCAACATATAATGAACAGAAGGAAAAGAAAACATGTGAT GAGTTGGAGAGATGTGTGAGTAGTTTTCTGAAGTTGACCAAACATCACCTTTCAGTCTTC AAGGAGGTCCTAAGCCCGTCAATTGAGAGTATCCGAACATATGTGGATAACTTGGTGGTC TTGAACTCAAGGGAAGAGACAAAACAAGATGAAGATGATGAAGCATCCGAGAAGACAAAC CCACGAATAAGCCTTGAAGAGGAATATTTGGAAACTGAAAAGAAGATCATAATTGCTTTA AGCATTGCTGATCACATAAAGAAGTTATTTTACTCTGAGCAATGGGCTAATTCTAGGAGA GATGATCCAGAGGTCAAGAACCTAATTGCCGAGATCGAGAAATTGAGGGGAGAATTTGAA TCTATAGAAAGGCCAATGCTAAGCATAGAAGCTAATAAATCAAAGCCACTACCTGAGGAG AGATCTGAATTGAGCCCTTCACCAATCCAGGCACCCGCTACGCCTAAGGCTGCACACGTC GACTCTCCAAAATCTCCCATGAAGCCCGAGCAGCATCTGAATCCTGACAATGAGCTCGCA AACCTGGGAGCAGAACTTGGATCGGAGGACAGAGATTTTTCAGGTGAGGAGATTAACGGG TGGGAGTTCGATGAGCTCGAAGAGGACCTGAAAAACTGACATAGCTGGGATCAAAGCAAC AAAAATAGCAACATGTTCATGTACGCCCCCCAGTTCTGTTTGATGTACATATGACAACTT CGTTCATTTGTATTGTCGATATTTCAGGACATGCAGATTGAACTTTCTAAGTCTTTTAAC CTTGGCAAGGCATTTGCTATTTGTTTGTCTTGCCATGAGATGTTGCATCATTACATGTAC ACTTGAATACAGATTTTACTGAATACTGTTGTAACATTTGCAAAGACAGACAATAAATGT TTTCACCGACGGTCGATCAGTTTGC