Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0161800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:3638255:3640497:1 gene:Os05g0161800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca2+-ACTIVATED RELA-SPOT HOMOLOG 3 description:RelA/SpoT domain containing protein. (Os05t0161800-01)
Sequence	ATGGCGAACGCCGGTGTCAATGAGACGGTCGCCGTCGCCGTCGCCATTGACGCACCTGGA GTTGGGCATGACCATGGTGCCGCCGGCGAGGTTCGTCGTCCGTCGACGCGCCGGCTGGCT CCGGCGGGAAGCGGCGGGCGGCTGATGGCGGAGCTTCTTGGCGTGTTCAATGGACTGACG GAGCGGATGGGGGAGGACGTGGCGACCTCGTCGTCGTCGCGGCTTCTCTTCCGCGCGCTC AAGCTGGCGCTTCCCGCGCTCCGCGACGGCGGCGGCGATGGCGGCGGCGGCCAGTCCGTC TCCCGTGCGCTCGTGGTCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCGGAGGTCATC TCGGCTGGCATGGTGAGGGGAGCTCTGGATACCGGGGCACTCGCCATGGCCGACGTCGAG GCGCAGCTCGGTGCCAGCGCCGCCGGTCTGGTGGAAGAGAGCCTCAAGGTGAAGCGCGCG CCGTCGGAGGTCGACGTCGCCGACGAGGAGGCCGCGAGCGCGCTGCGGAAGCGGTGCCTC TCCAGCTACGACATCCGCGCCGTCATCCTGGAGCTCGCCGTCAAGCTCGACGCCATGAAG CACCTCGACGTCCTCCCCAAGCACCAGCAGCGGACCACCTCGCTTGAGGTGCTCAAGGTG TTCGCGCTGCTGGCGCACGCCGTCGGCGCCGGCGAGCTGTCGCTGGAGCTCGAGGACCTC TCCTTCCAGCGCCTGTACCCGCAGGCCTACGCCCACATCGACCAGTGGCTGAGCAGCCAA GAAGACGACTGCAAGCGCGTCATCGCCGCGTCCAAGGAGGAGCTCCTCCGCGCGCTCACC GCCGACGACGAGCTCCGCTGCACCGTCACCGGCGTCGACGTCATGGGCCGGTACAAGAGC CGGTTCAGCACCATGAAGAAGCTGGTGAAGGACGGCCGGCGGCCGGAGGACGTGAACGAC ATCCTCGGCATGCGCGTCATCCTGGACCCTCGCCCCGGCGGCGGCGGCGGCGGCGACGGC GACGGCGGCGACAGGGCATGCCTGCGGACGCACGAGGTGATCAAGGCCATGTGGAAGGAC GTGCCGGCGAGGACCAAGGACTACATCACGCGTCCCAAGGGGAACGGGTACCGGAGCTTG CACGTCGCCGTCGACATGAGCGAGCCGGGGCCGGAGGGGAAGAAGAGGCCGCTGATGGAG ATCCAGGTGCGCACCAGGGAGATGGACATGGCCGCCGTCGGCGGCCAGGCGTCGCACGCG CTCTACAAGGGCGGCCTCACCGATCCTGAGGAGGCCAAGAGGCTCAAGGCCATCATGCTG GCGGCGGCGGAGGTGGCAGCTCAGCACCTCCGCGACGAGCCAGCCGGCGACGGTGGTCAA ACAACCGCCGCCGCCTCCGCCGCCACCGCCGGCAATGTCGAGCGAGCGTTCCAGCTGCTC GACAAGAACGGCGACGGGAGGATCAGCATGGAGGAGCTAACCGAGATCATGGAGGACCTC GGCGCCGGCGGCCATGACGCCGAGGAGCTCATGCGCCTCCTCGACGCCAACAGCGACGGC TCGCTCAGCTCCGACGAGTTCGCGCTCTTCCAGAAACGGGTTAAGCTGAAGACGAAGTTA GAGAACAAGGATGATGAGTACAAGGAGATCCTCAAGCAGAAGCTGCAGAAGGTTGACGAC ACGGGGCTCATCCACGTCTACCGCAAGAACCTCAGCGACAAGTTGGTCCTCGTTTGA

Peptide Sequence

PEP ID	Os05t0161800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:3638255:3640497:1 gene:Os05g0161800 transcript:Os05t0161800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca2+-ACTIVATED RELA-SPOT HOMOLOG 3 description:RelA/SpoT domain containing protein. (Os05t0161800-01)
Sequence	MANAGVNETVAVAVAIDAPGVGHDHGAAGEVRRPSTRRLAPAGSGGRLMAELLGVFNGLT ERMGEDVATSSSSRLLFRALKLALPALRDGGGDGGGGQSVSRALVVAASLADLQMDAEVI SAGMVRGALDTGALAMADVEAQLGASAAGLVEESLKVKRAPSEVDVADEEAASALRKRCL SSYDIRAVILELAVKLDAMKHLDVLPKHQQRTTSLEVLKVFALLAHAVGAGELSLELEDL SFQRLYPQAYAHIDQWLSSQEDDCKRVIAASKEELLRALTADDELRCTVTGVDVMGRYKS RFSTMKKLVKDGRRPEDVNDILGMRVILDPRPGGGGGGDGDGGDRACLRTHEVIKAMWKD VPARTKDYITRPKGNGYRSLHVAVDMSEPGPEGKKRPLMEIQVRTREMDMAAVGGQASHA LYKGGLTDPEEAKRLKAIMLAAAEVAAQHLRDEPAGDGGQTTAAASAATAGNVERAFQLL DKNGDGRISMEELTEIMEDLGAGGHDAEELMRLLDANSDGSLSSDEFALFQKRVKLKTKL ENKDDEYKEILKQKLQKVDDTGLIHVYRKNLSDKLVLV

Transcript Sequence

Transcript ID	Os05t0161800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3638255:3640497:1 gene:Os05g0161800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Ca2+-ACTIVATED RELA-SPOT HOMOLOG 3 description:RelA/SpoT domain containing protein. (Os05t0161800-01)
Sequence	AACTAAGCAAGGGTATTGTGTTTGGTTGTTGCTTGCTAGCTAGCCGCTGGTGAGTGGTGA TCAACAAGATGGCGAACGCCGGTGTCAATGAGACGGTCGCCGTCGCCGTCGCCATTGACG CACCTGGAGTTGGGCATGACCATGGTGCCGCCGGCGAGGTTCGTCGTCCGTCGACGCGCC GGCTGGCTCCGGCGGGAAGCGGCGGGCGGCTGATGGCGGAGCTTCTTGGCGTGTTCAATG GACTGACGGAGCGGATGGGGGAGGACGTGGCGACCTCGTCGTCGTCGCGGCTTCTCTTCC GCGCGCTCAAGCTGGCGCTTCCCGCGCTCCGCGACGGCGGCGGCGATGGCGGCGGCGGCC AGTCCGTCTCCCGTGCGCTCGTGGTCGCCGCCTCCCTCGCCGACCTCCAGATGGACGCGG AGGTCATCTCGGCTGGCATGGTGAGGGGAGCTCTGGATACCGGGGCACTCGCCATGGCCG ACGTCGAGGCGCAGCTCGGTGCCAGCGCCGCCGGTCTGGTGGAAGAGAGCCTCAAGGTGA AGCGCGCGCCGTCGGAGGTCGACGTCGCCGACGAGGAGGCCGCGAGCGCGCTGCGGAAGC GGTGCCTCTCCAGCTACGACATCCGCGCCGTCATCCTGGAGCTCGCCGTCAAGCTCGACG CCATGAAGCACCTCGACGTCCTCCCCAAGCACCAGCAGCGGACCACCTCGCTTGAGGTGC TCAAGGTGTTCGCGCTGCTGGCGCACGCCGTCGGCGCCGGCGAGCTGTCGCTGGAGCTCG AGGACCTCTCCTTCCAGCGCCTGTACCCGCAGGCCTACGCCCACATCGACCAGTGGCTGA GCAGCCAAGAAGACGACTGCAAGCGCGTCATCGCCGCGTCCAAGGAGGAGCTCCTCCGCG CGCTCACCGCCGACGACGAGCTCCGCTGCACCGTCACCGGCGTCGACGTCATGGGCCGGT ACAAGAGCCGGTTCAGCACCATGAAGAAGCTGGTGAAGGACGGCCGGCGGCCGGAGGACG TGAACGACATCCTCGGCATGCGCGTCATCCTGGACCCTCGCCCCGGCGGCGGCGGCGGCG GCGACGGCGACGGCGGCGACAGGGCATGCCTGCGGACGCACGAGGTGATCAAGGCCATGT GGAAGGACGTGCCGGCGAGGACCAAGGACTACATCACGCGTCCCAAGGGGAACGGGTACC GGAGCTTGCACGTCGCCGTCGACATGAGCGAGCCGGGGCCGGAGGGGAAGAAGAGGCCGC TGATGGAGATCCAGGTGCGCACCAGGGAGATGGACATGGCCGCCGTCGGCGGCCAGGCGT CGCACGCGCTCTACAAGGGCGGCCTCACCGATCCTGAGGAGGCCAAGAGGCTCAAGGCCA TCATGCTGGCGGCGGCGGAGGTGGCAGCTCAGCACCTCCGCGACGAGCCAGCCGGCGACG GTGGTCAAACAACCGCCGCCGCCTCCGCCGCCACCGCCGGCAATGTCGAGCGAGCGTTCC AGCTGCTCGACAAGAACGGCGACGGGAGGATCAGCATGGAGGAGCTAACCGAGATCATGG AGGACCTCGGCGCCGGCGGCCATGACGCCGAGGAGCTCATGCGCCTCCTCGACGCCAACA GCGACGGCTCGCTCAGCTCCGACGAGTTCGCGCTCTTCCAGAAACGGGTTAAGCTGAAGA CGAAGTTAGAGAACAAGGATGATGAGTACAAGGAGATCCTCAAGCAGAAGCTGCAGAAGG TTGACGACACGGGGCTCATCCACGTCTACCGCAAGAACCTCAGCGACAAGTTGGTCCTCG TTTGATCGATCCAGTCTGATTAATACGAGCAATCTTAATTTGTCCTCGTGTCTTTTAGAA AAAAAAATAAGTGAAAGATGTCTTGTCATTTTCACATTTGCACCGTGAAATGCGCACAAA TCCACGTGTGTTGTACTTGTTTTTTGGCAAGTGGTCAGATTGCAATTTGGACGTGAAGTT TAAATGCAAATGTCTTGAAAATCAGTGCTGATGTATCGTAAGAAAAGGAAATGAATTCAG CTCCATCCTTTACATTTCAGCTTATCAGCTGAGTT