Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0159000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:3472328:3485081:1 gene:Os05g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding description:HECT domain containing protein. (Os05t0159000-01)
Sequence	ATGTTCTTCTCCGGTGACCCGACGGCGAGGAAGCGGGTGGACCTCGGCGGGCGGAGCAGC AAGGAGCGGGACCGGCAGGTGCTGCTCGAGCAGACGCGGGAGGAGCGGCGGCGGCGGCTG GGCCTGCGCCTGCAGAACAGCTCCGCCACGAAGATCCAGAAATGCTTCAGAGGGAAGAGA GATTTGGAATTGGCACGTTCGGAAGTTCGAGGGAACTTTTGCTCTACTTTTGGGGAGCAC TGCCAGAGGGTTGATTGGAGCAGTTTCGGTGCTAATTCTGATTTCCTTCGTCAATTCCTG TTCTTCTTCAATGCAAAGAAAGACAGTGATATTGCTATACTCTGTCAAGTCTGCAATTTG CTGTTATATTATGTCAAACATGGTGGAGATGTTCTAAGACTCTTTGGTGGTACAAATTAC TCCTCACTGGAACCTCTTGTGATTCACAGGGTTAAAAAACTTGCACTCATTTGTGTGCAA ACTGTACATCAGAAAAGGCATGATTGGGGCAGTCAGCTTTTGATGCCGCCAGAAAGCACA CCAAAGCCTTGTGGTTCATTACTCGAAACTGCCGCTTGCTTGATAAATCCTAAGCTTGCA TGGAACTGCAAGGTAGTTGGGTATCTTCAGCGGAAGAAGATCTATTGCTTATTTAGGGGG ATTATTATATCCATACCGCAAACTGCAAGAAATTTGGAGCATAATAACAATACATCTGCT CTGGAGCAAGTTCTTATGCTTATTGCTTCACATATTGGCGATGATCCGTGTTGTTGTCCA GTAGTGGATCCAAGATGGAGTTTCTCCTCTCAGCTTCTATCGATTCCTTTCCTCTGGCAT CGTTTATCACACTTCAAGAAGGTTTTCTCAGCTAATGGACTCAGCAAATATTATATCCAT CAGATAGCTTGCTTTTTGCCTAGCTGCGCTGATGTTCTTCCAAATGATATATCATCTAAT CATCCAGGTTATGCATGTGTTCTTGCAAATGTTCTTGAAGCTGCAACCTGGATTTTGTCC GAGCCAAAGTTTGCTTCTGAAACAGCGGCTGACATCATTGCAGTCTGTACATCACTGCTG GACGCGTTGCCAACCATTACATCACCTACCGGAAGGGCAGATGACGACGATGACACACCC ATGGATGATGTCATTAATGGTCTTGATGCTGATTTGGAAAAACAAATTACTGCAGCAATT GATTCAAGGTTGCTTCAACATTTGGTGAATGCTCTGTTCAGAGGCACAATTAGTACAGAC TATTCTTATCCAACTGGACCGTCAGATATTGAGGTGGAAGCTGTAGGATCTATATGTGCT TTTCTTCATGTCACATTCAACACATTGCCTGCAGAGCGGATTATGACTGGCCTGGCCTAC CGGACTGAAATAGTTCCTGCACTATGGAACTTCATAAAGCGATGTAATGAGAACCAAAGC TGGCCACAATTTTCCAAGTTTGTCTCTTCTCCGCCTGCAGATGCCGTGGGTTGGCTCCTA CCTGTATCTGTATTCTGTCCCATATACAAGCACATGTTGAAGATAATTGATAACGGGGAA TTCTATGAACAAGAGAAACCTTTGTCACTTAAAGATTTGAAGTCCTTGGTTTTAATTCTA AAGAAGGCTTTATGGGAACTTCTATGGGTTATTCCTTCACATGCCTCTCCTGCTAAGAAA GTGCTACCCAACCCTTCTGGATTTAAGAAGTTGTCAATTGAGAATGTCAAGATTGGGGCA AGGATTGGGTTATCTGAACTACTTGCACAGTTGCAAGACTGGAATAACAGGCTCCCATTT ACTTCTTCCAATGATTTCTATTCACAACAAGCAACTAGTGAAAATTTTGTCTCTCAGGCT CTTCTTGGCAATACTCGAGCATCTGAAATTATAAAGCTGGCTCCCTTTTTAGCACCTTTT ACCAGCAGAGTTAAAATATTCACTTCACAATTGGCAAATTCTAGACAATCGACAACATCC CATTCTGCTTTGACAAGACACCGGTTCAAAATAAGAAGAAATCGACTTCTGGAAGACGCT TTTGATCAGCTAAGCATGCTTTCTGAAGAAGACCTTAAAGGACCAATTCGAGTGGTGTTT GTTAATGAGCATGGTGTTGAAGAGGCTGGGATTGACGGAGGTGGAATTTTCAAGGATTTC ATGGAAAATATCACTCGAGCCGCTTTTGATGTGCAGTACGGTTTATTCAAGGAGACAGCC GATCATCTTCTCTACCCAAATCCTGGATCTGGATTGGTCCATGAACAGCATCTGCAATAC TTCCATTTTCTTGGCAGTCTCCTTGGGAAGGCAATCTATGAGGGCATACTTGTTGATCTG CCATTTGCAACATTCTTCTTGAGTAAACTAAAACACAAGTACAACTTCTTAAATGATCTG CCTTCATTGGATCCAGAATTGTATCGTCATCTTCTGTCTTTAAAGCATTATGATGGTGAT ATCTCGCAATTGGAGTTATACTTTGTTATTGTGAATAACGAATATGGTGAACAATCTGAA GAAGAACTGCTCCCAGGTGGGAGAGATATGCGTGTAACTAGTGAAAATGTTATTACTTAT ATCCATCTTGTCGCCAACCATCGGTTGAACTATCAGATCCGCGCCCAAAGCACACATTTT TTGAGAGGCTTTCAACAACTAATACCGAATGAATGGATTAACATGTTCAATGAACATGAA TTCCAGGTTCTCATATCTGGCTCTCTAGAAAGCTTGGACATCGATGACTTGCGCTCGAAC ACTAACTATTCTGGAGGATATCATCCGGACCATGAGCTTATTGATATATTCTGGGAGGTC CTAAAGAGCTTCAGTTCGCATAATCAGAAAAAGTTTCTCAAGTTCGTGACCGGATGTTCT CGTGGACCACTCCTTGGATTTCAGTACCTCGAACCAAAATTCTGCATTCAGAGGGCTGGT GTTCCTGGCATGGAGGAGGAGGACGAAGACCGCTTGCCTACATCGGCCACTTGCATGAAC CTCCTGAAGCTCCCTCCTTATAGAAACAAGACACAATTGGAAAGCAAATTGTTGTACGCG ATAAATGCAGAAGCTGGTTTTGATCTAAGTTAA

Peptide Sequence

PEP ID	Os05t0159000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:3472328:3485081:1 gene:Os05g0159000 transcript:Os05t0159000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:HECT domain containing protein. (Os05t0159000-01)
Sequence	MFFSGDPTARKRVDLGGRSSKERDRQVLLEQTREERRRRLGLRLQNSSATKIQKCFRGKR DLELARSEVRGNFCSTFGEHCQRVDWSSFGANSDFLRQFLFFFNAKKDSDIAILCQVCNL LLYYVKHGGDVLRLFGGTNYSSLEPLVIHRVKKLALICVQTVHQKRHDWGSQLLMPPEST PKPCGSLLETAACLINPKLAWNCKVVGYLQRKKIYCLFRGIIISIPQTARNLEHNNNTSA LEQVLMLIASHIGDDPCCCPVVDPRWSFSSQLLSIPFLWHRLSHFKKVFSANGLSKYYIH QIACFLPSCADVLPNDISSNHPGYACVLANVLEAATWILSEPKFASETAADIIAVCTSLL DALPTITSPTGRADDDDDTPMDDVINGLDADLEKQITAAIDSRLLQHLVNALFRGTISTD YSYPTGPSDIEVEAVGSICAFLHVTFNTLPAERIMTGLAYRTEIVPALWNFIKRCNENQS WPQFSKFVSSPPADAVGWLLPVSVFCPIYKHMLKIIDNGEFYEQEKPLSLKDLKSLVLIL KKALWELLWVIPSHASPAKKVLPNPSGFKKLSIENVKIGARIGLSELLAQLQDWNNRLPF TSSNDFYSQQATSENFVSQALLGNTRASEIIKLAPFLAPFTSRVKIFTSQLANSRQSTTS HSALTRHRFKIRRNRLLEDAFDQLSMLSEEDLKGPIRVVFVNEHGVEEAGIDGGGIFKDF MENITRAAFDVQYGLFKETADHLLYPNPGSGLVHEQHLQYFHFLGSLLGKAIYEGILVDL PFATFFLSKLKHKYNFLNDLPSLDPELYRHLLSLKHYDGDISQLELYFVIVNNEYGEQSE EELLPGGRDMRVTSENVITYIHLVANHRLNYQIRAQSTHFLRGFQQLIPNEWINMFNEHE FQVLISGSLESLDIDDLRSNTNYSGGYHPDHELIDIFWEVLKSFSSHNQKKFLKFVTGCS RGPLLGFQYLEPKFCIQRAGVPGMEEEDEDRLPTSATCMNLLKLPPYRNKTQLESKLLYA INAEAGFDLS

Transcript Sequence

Transcript ID	Os05t0159000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3472328:3485081:1 gene:Os05g0159000 gene_biotype:protein_coding transcript_biotype:protein_coding description:HECT domain containing protein. (Os05t0159000-01)
Sequence	GAACACGAACTCTTTCCCCTCCACCTCTCGACTCCTCCCTCGCTTCTCCCCCTCCGCAAG TCTCCCTCCCTCCCCCACAAACCCTACCTCGCCCCCTCCCTCCTTCGATCGGGGGAGCGC TCCATTGCGGCGAAGGGGAAGGGGGAGTCGGGGATGTTCTTCTCCGGTGACCCGACGGCG AGGAAGCGGGTGGACCTCGGCGGGCGGAGCAGCAAGGAGCGGGACCGGCAGGTGCTGCTC GAGCAGACGCGGGAGGAGCGGCGGCGGCGGCTGGGCCTGCGCCTGCAGAACAGCTCCGCC ACGAAGATCCAGAAATGCTTCAGAGGGAAGAGAGATTTGGAATTGGCACGTTCGGAAGTT CGAGGGAACTTTTGCTCTACTTTTGGGGAGCACTGCCAGAGGGTTGATTGGAGCAGTTTC GGTGCTAATTCTGATTTCCTTCGTCAATTCCTGTTCTTCTTCAATGCAAAGAAAGACAGT GATATTGCTATACTCTGTCAAGTCTGCAATTTGCTGTTATATTATGTCAAACATGGTGGA GATGTTCTAAGACTCTTTGGTGGTACAAATTACTCCTCACTGGAACCTCTTGTGATTCAC AGGGTTAAAAAACTTGCACTCATTTGTGTGCAAACTGTACATCAGAAAAGGCATGATTGG GGCAGTCAGCTTTTGATGCCGCCAGAAAGCACACCAAAGCCTTGTGGTTCATTACTCGAA ACTGCCGCTTGCTTGATAAATCCTAAGCTTGCATGGAACTGCAAGGTAGTTGGGTATCTT CAGCGGAAGAAGATCTATTGCTTATTTAGGGGGATTATTATATCCATACCGCAAACTGCA AGAAATTTGGAGCATAATAACAATACATCTGCTCTGGAGCAAGTTCTTATGCTTATTGCT TCACATATTGGCGATGATCCGTGTTGTTGTCCAGTAGTGGATCCAAGATGGAGTTTCTCC TCTCAGCTTCTATCGATTCCTTTCCTCTGGCATCGTTTATCACACTTCAAGAAGGTTTTC TCAGCTAATGGACTCAGCAAATATTATATCCATCAGATAGCTTGCTTTTTGCCTAGCTGC GCTGATGTTCTTCCAAATGATATATCATCTAATCATCCAGGTTATGCATGTGTTCTTGCA AATGTTCTTGAAGCTGCAACCTGGATTTTGTCCGAGCCAAAGTTTGCTTCTGAAACAGCG GCTGACATCATTGCAGTCTGTACATCACTGCTGGACGCGTTGCCAACCATTACATCACCT ACCGGAAGGGCAGATGACGACGATGACACACCCATGGATGATGTCATTAATGGTCTTGAT GCTGATTTGGAAAAACAAATTACTGCAGCAATTGATTCAAGGTTGCTTCAACATTTGGTG AATGCTCTGTTCAGAGGCACAATTAGTACAGACTATTCTTATCCAACTGGACCGTCAGAT ATTGAGGTGGAAGCTGTAGGATCTATATGTGCTTTTCTTCATGTCACATTCAACACATTG CCTGCAGAGCGGATTATGACTGGCCTGGCCTACCGGACTGAAATAGTTCCTGCACTATGG AACTTCATAAAGCGATGTAATGAGAACCAAAGCTGGCCACAATTTTCCAAGTTTGTCTCT TCTCCGCCTGCAGATGCCGTGGGTTGGCTCCTACCTGTATCTGTATTCTGTCCCATATAC AAGCACATGTTGAAGATAATTGATAACGGGGAATTCTATGAACAAGAGAAACCTTTGTCA CTTAAAGATTTGAAGTCCTTGGTTTTAATTCTAAAGAAGGCTTTATGGGAACTTCTATGG GTTATTCCTTCACATGCCTCTCCTGCTAAGAAAGTGCTACCCAACCCTTCTGGATTTAAG AAGTTGTCAATTGAGAATGTCAAGATTGGGGCAAGGATTGGGTTATCTGAACTACTTGCA CAGTTGCAAGACTGGAATAACAGGCTCCCATTTACTTCTTCCAATGATTTCTATTCACAA CAAGCAACTAGTGAAAATTTTGTCTCTCAGGCTCTTCTTGGCAATACTCGAGCATCTGAA ATTATAAAGCTGGCTCCCTTTTTAGCACCTTTTACCAGCAGAGTTAAAATATTCACTTCA CAATTGGCAAATTCTAGACAATCGACAACATCCCATTCTGCTTTGACAAGACACCGGTTC AAAATAAGAAGAAATCGACTTCTGGAAGACGCTTTTGATCAGCTAAGCATGCTTTCTGAA GAAGACCTTAAAGGACCAATTCGAGTGGTGTTTGTTAATGAGCATGGTGTTGAAGAGGCT GGGATTGACGGAGGTGGAATTTTCAAGGATTTCATGGAAAATATCACTCGAGCCGCTTTT GATGTGCAGTACGGTTTATTCAAGGAGACAGCCGATCATCTTCTCTACCCAAATCCTGGA TCTGGATTGGTCCATGAACAGCATCTGCAATACTTCCATTTTCTTGGCAGTCTCCTTGGG AAGGCAATCTATGAGGGCATACTTGTTGATCTGCCATTTGCAACATTCTTCTTGAGTAAA CTAAAACACAAGTACAACTTCTTAAATGATCTGCCTTCATTGGATCCAGAATTGTATCGT CATCTTCTGTCTTTAAAGCATTATGATGGTGATATCTCGCAATTGGAGTTATACTTTGTT ATTGTGAATAACGAATATGGTGAACAATCTGAAGAAGAACTGCTCCCAGGTGGGAGAGAT ATGCGTGTAACTAGTGAAAATGTTATTACTTATATCCATCTTGTCGCCAACCATCGGTTG AACTATCAGATCCGCGCCCAAAGCACACATTTTTTGAGAGGCTTTCAACAACTAATACCG AATGAATGGATTAACATGTTCAATGAACATGAATTCCAGGTTCTCATATCTGGCTCTCTA GAAAGCTTGGACATCGATGACTTGCGCTCGAACACTAACTATTCTGGAGGATATCATCCG GACCATGAGCTTATTGATATATTCTGGGAGGTCCTAAAGAGCTTCAGTTCGCATAATCAG AAAAAGTTTCTCAAGTTCGTGACCGGATGTTCTCGTGGACCACTCCTTGGATTTCAGTAC CTCGAACCAAAATTCTGCATTCAGAGGGCTGGTGTTCCTGGCATGGAGGAGGAGGACGAA GACCGCTTGCCTACATCGGCCACTTGCATGAACCTCCTGAAGCTCCCTCCTTATAGAAAC AAGACACAATTGGAAAGCAAATTGTTGTACGCGATAAATGCAGAAGCTGGTTTTGATCTA AGTTAAAATCGGCTTTTGGACCAAATATTGTGCAGTGTAGATAGTTTCTAGGTAACAGAT TAAAGGCACCCAAGGGCCAAAACACCGACCTCTGGGCCCCCTTTTGAGCCCCCCATAAAG TAAAAGGAAGGATCGATTCCAGGAGGAGGTAAGCGAAACTGAAGACACGAGGAGGGAGGC AACAGCCAGCTGCTCAAGTGCTGATTAGGCCGGTGATAAATTATTCACCTTAAATAAGCA GATGCTGTTGTTGTAATCAGCCGTGAACTTGTACATGTATTTTTACCAACGTTGTGGTTG GTTGATGTCCTCTCGTGGAGTTGTGGGATGACATGTTAGTTGGGTTTGGAAACCGGCATC AGCGTCGCTGTAGCTGTACTTTGGTGTTGGTGTTGCTGTCATGTAAGGTAACCCTAACAC CAGCTGCTTGGTGCCCAGGGGCTGGGAATCATACATAATCAGTGAAAAAAAAGGGAGAGA TTTGTAAG