Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0155800-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:3269118:3270614:1 gene:Os05g0155800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.5 protein. (Os05t0155800-00)
Sequence

ATGCACGCGTATATATATTGCTCACATCGCCAATCACAATGCAAGCAAAGCAAGCAGCAG
AAGAGCTCACGAAGAGATTGTCCAGCTAGTGTGAACATGGCGAGGACGATGTCGTCGGTG
CGCCGCGGCGCGGCGGAGCTGGTGGCGCCGGCGAGGGCGACGCCGCACGAGTTCAAGCCG
CTGTCGGACATCGACGACCAGGAGGGCCTCCGGTTCTACCGCTCGGGCCTCTTCCTGTAC
CGGCGGCGCGCCGCCATGGACGGCGTCGACCCCGCCGCCGTGCTCCGCGCCGCGCTCGCG
GAGGCGCTCGTCCACTACTACCCGCTCGCCGGCCGCATCGTGGAGGCGAGCCCCGGGAGG
AAGCTGCTCGTCGAGTGCACCGGCGAGGGCGCGGTGTTCGTCGCGGCGGAGTCCGGGGTG
GCGATGGATGAGCTCGGGGAGGTGACCGGCCCGCCCGTGCCGCGCCACGAGGAGCTCCTG
TGCGCCGCCGACGGCGCGTACGCCGACGGCGGCGTCGTGGGGCGGCCGCTGCTCTACTTC
CAGGTCACGCGCATGCGGTGCGGCGGCTTCGTGTGGGGGCTCCAGATCTGCCACTGCCTC
GCCGACGCCGCCGGCGTCGCGCAGTTCATGACGGCGGTGGGGGAGTTCGCGCGCGGGGTG
CCCGGCGCGCCGACGGTGAAGCCGGTGTGGGCGAGGGAGCTCCTCTCCGCGCGCCGGCCG
CCTCTGCCGCGCGACGTCGCCGCGCCACGCCACCCGGAGTACGAGGCGGTGCCGGACGCC
GGCAGGGACAAGGTCTCCCACTCCGACGCGCTCGTCCACCGTCCCTTCTTCTTCGGCCGC
CGCGAGATCGCCGCGCTGCGCGCGCTCGCGCCGCCGTCGCTGGCCTCCCGGAGCTCGCGG
TTCGACCTCATCGCCGCCTTCACGTGGCGGTGCCGCGCCAACGCGCTCCAATACGACGCC
GCCGACGCGGTGCGCGTCCAGTTCGTCGTGAACGCCCGCGGCGGCGGCCGCGGGCGCCGC
AGCAACGCCCCGCCGCTTCTCCCCGACGGCTACTACGGCAACGCGTTCGCGTTCGCCGTC
GCCGAGTCGCCGGCGGGGGAGCTCCGCCGGCGCCCGTTCGCGCACGCGCTCCGCCTCGTG
GTGGACGCCAAGGCGCGCGCCATGGAGGAGGGCCACCTCCAGTCGGTGGCCGACCTGATG
GCGGCGCGCGGGCGGCCGCGGTTCGCCGTGGCACGCACCTACGTGGTGTCGGACCTCACG
CGGTCGGGGCTCGACGGCGTGGACGTCGGGTGGGGCGCGCCGGCGTACGGCGGGCCGGCG
ACGGCGACGCTGGCGACGTTCCACGTCGCCGGGAGGAGGAGCGGGGACGGCGAGGAGGGC
GTCGAGGTGCCTATTCGGCTGCCGGCGCCGGCGATGGAGAGGATGGTGGTGGAGGTGGCG
AGAGAGCTCGGTGGCGTCGATGCACATACTGAAGCGTGCTTAGCTGCAAGGCTCTAG

Peptide Sequence

PEP ID

Os05t0155800-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:3269118:3270614:1 gene:Os05g0155800 transcript:Os05t0155800-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.5 protein. (Os05t0155800-00)
Sequence

MHAYIYCSHRQSQCKQSKQQKSSRRDCPASVNMARTMSSVRRGAAELVAPARATPHEFKP
LSDIDDQEGLRFYRSGLFLYRRRAAMDGVDPAAVLRAALAEALVHYYPLAGRIVEASPGR
KLLVECTGEGAVFVAAESGVAMDELGEVTGPPVPRHEELLCAADGAYADGGVVGRPLLYF
QVTRMRCGGFVWGLQICHCLADAAGVAQFMTAVGEFARGVPGAPTVKPVWARELLSARRP
PLPRDVAAPRHPEYEAVPDAGRDKVSHSDALVHRPFFFGRREIAALRALAPPSLASRSSR
FDLIAAFTWRCRANALQYDAADAVRVQFVVNARGGGRGRRSNAPPLLPDGYYGNAFAFAV
AESPAGELRRRPFAHALRLVVDAKARAMEEGHLQSVADLMAARGRPRFAVARTYVVSDLT
RSGLDGVDVGWGAPAYGGPATATLATFHVAGRRSGDGEEGVEVPIRLPAPAMERMVVEVA
RELGGVDAHTEACLAARL

Transcript Sequence

Transcript ID

Os05t0155800-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:3269118:3270614:1 gene:Os05g0155800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to OSIGBa0157A06.5 protein. (Os05t0155800-00)
Sequence

ATGCACGCGTATATATATTGCTCACATCGCCAATCACAATGCAAGCAAAGCAAGCAGCAG
AAGAGCTCACGAAGAGATTGTCCAGCTAGTGTGAACATGGCGAGGACGATGTCGTCGGTG
CGCCGCGGCGCGGCGGAGCTGGTGGCGCCGGCGAGGGCGACGCCGCACGAGTTCAAGCCG
CTGTCGGACATCGACGACCAGGAGGGCCTCCGGTTCTACCGCTCGGGCCTCTTCCTGTAC
CGGCGGCGCGCCGCCATGGACGGCGTCGACCCCGCCGCCGTGCTCCGCGCCGCGCTCGCG
GAGGCGCTCGTCCACTACTACCCGCTCGCCGGCCGCATCGTGGAGGCGAGCCCCGGGAGG
AAGCTGCTCGTCGAGTGCACCGGCGAGGGCGCGGTGTTCGTCGCGGCGGAGTCCGGGGTG
GCGATGGATGAGCTCGGGGAGGTGACCGGCCCGCCCGTGCCGCGCCACGAGGAGCTCCTG
TGCGCCGCCGACGGCGCGTACGCCGACGGCGGCGTCGTGGGGCGGCCGCTGCTCTACTTC
CAGGTCACGCGCATGCGGTGCGGCGGCTTCGTGTGGGGGCTCCAGATCTGCCACTGCCTC
GCCGACGCCGCCGGCGTCGCGCAGTTCATGACGGCGGTGGGGGAGTTCGCGCGCGGGGTG
CCCGGCGCGCCGACGGTGAAGCCGGTGTGGGCGAGGGAGCTCCTCTCCGCGCGCCGGCCG
CCTCTGCCGCGCGACGTCGCCGCGCCACGCCACCCGGAGTACGAGGCGGTGCCGGACGCC
GGCAGGGACAAGGTCTCCCACTCCGACGCGCTCGTCCACCGTCCCTTCTTCTTCGGCCGC
CGCGAGATCGCCGCGCTGCGCGCGCTCGCGCCGCCGTCGCTGGCCTCCCGGAGCTCGCGG
TTCGACCTCATCGCCGCCTTCACGTGGCGGTGCCGCGCCAACGCGCTCCAATACGACGCC
GCCGACGCGGTGCGCGTCCAGTTCGTCGTGAACGCCCGCGGCGGCGGCCGCGGGCGCCGC
AGCAACGCCCCGCCGCTTCTCCCCGACGGCTACTACGGCAACGCGTTCGCGTTCGCCGTC
GCCGAGTCGCCGGCGGGGGAGCTCCGCCGGCGCCCGTTCGCGCACGCGCTCCGCCTCGTG
GTGGACGCCAAGGCGCGCGCCATGGAGGAGGGCCACCTCCAGTCGGTGGCCGACCTGATG
GCGGCGCGCGGGCGGCCGCGGTTCGCCGTGGCACGCACCTACGTGGTGTCGGACCTCACG
CGGTCGGGGCTCGACGGCGTGGACGTCGGGTGGGGCGCGCCGGCGTACGGCGGGCCGGCG
ACGGCGACGCTGGCGACGTTCCACGTCGCCGGGAGGAGGAGCGGGGACGGCGAGGAGGGC
GTCGAGGTGCCTATTCGGCTGCCGGCGCCGGCGATGGAGAGGATGGTGGTGGAGGTGGCG
AGAGAGCTCGGTGGCGTCGATGCACATACTGAAGCGTGCTTAGCTGCAAGGCTCTAG