Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0155601-00
CDS Infomation	cds chromosome:IRGSP-1.0:5:3252035:3255881:-1 gene:Os05g0155601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin alpha-1b subunit. (Os05t0155601-00)
Sequence	ATGTCGCTGCGGCCGAGCGAGCGGGCGGAGGTGCGGCGGAGCAGGTACAAGGTGGCGGTG GACGCGGACGAGGGGCGGAGGCGGAGGGAGGACAACATGGTGGAGATCCGCAAGAGCCGG CGCGAGGAGAGCCTCCTGAAGAAGCGCCGCGACGGCCTCCCCGCCGCCGCCGCGGCCGCC GCGGCGGCGTCCCCGCTGCTCGCCCACTCCTCCGCGCTCCAGCAGAAGTTGGAGGGGTTG CCGGCGATGGTGCAGGCGGTGCAGTCCGACGACAGCGCCGTGCAGCTGGAGGCCACCACG CAGTTCCGGAAGCTGCTCTCCATCGAGCGGAGTCCTCCAATTGAGGAGGTGATCAACACA GGGGTGGTGCCTCGCTTTATTGCCTTCCTCCAACGTGAGGATTATCCCCAACTCCAGTTT GAGGCTGCATGGGCACTCACTAACATTGCATCAGGCACATCAGATAACACCAAAGTGGTA GTTGAGTCTGGTGCTGTGCCCATCTTTGTCAAACTGCTTAGCTCCCCCAGTGAGGATGTC CGTGAGCAGGCTGTATGGGCTCTGGGAAATGTGGCTGGTGACTCACCAAAATGCCGTGAC CTGGTGCTTGCAAGTGGTGGGTTATACCCATTGTTGCAACAGCTTAATGAGCACGCCAAG CTCTCAATGCTCAGGAATGCCACATGGACACTGTCAAACTTCTGCCGTGGGAAGCCTCAG CCTAATTTTGAGCAGGTCAAACCAGCGCTTTCTGCACTGCAGCGCCTCATCCATTCTCAG GACGAGGAGGTCCTGACTGATGCCTGCTGGGCTCTTTCTTATTTGTCTGATGGAACTAAT GATAAGATCCAAGCTGTGATAGAATCAGGAGTGTTCCCAAGGCTTGTGGAACTTCTCATG CATCCTTCGGCTTCAGTGCTCATTCCAGCTTTGCGCACGGTGGGTAACATCGTCACTGGG GATGACATGCAGACTCAGTGTGTCATCGATCATCAAGCTCTTCCATGTCTCTTGAACCTC TTGACCAACAATCATAAGAAAAGCATCAAGAAAGAAGCATGCTGGACTATCTCAAACATC ACTGCTGGCAATAGGGAACAGATTCAGGCTGTGATCAATGCAAACATAATTGCTCCTCTA GTACATCTGCTGCAAACTGCTGAATTTGACATCAAGAAAGAGGCTGCGTGGGCAATCTCA AATGCCACTTCTGGTGGAACACATGATCAGATTAAGTACCTTGTTGCCCAGGGTTGCATC AAGCCACTCTGTGATCTGCTTGTTTGCCCAGATCCCAGGATCGTGACAGTTTGCTTGGAA GGTCTTGAGAACATCTTGAAGGTTGGAGAGGCAGAAAAGAACCTTGGGGCAGGGGATGTC AATTCCTATGCTCAGATGATTGATGATGCTGAGGGACTGGAGAAGATTGAGAACCTTCAG AGCCATGACAACACTGAAATATATGAGAAGGCAGTTAAAATGCTCGAGTCCTACTGGTTG GAGGAGGAAGATGATGCCATGCCCTCAGGTGACAACGCTCAAAACGGCTTCAACTTTGGA AACCAGCAGCCCAATGTTCCATCGGGTGGATTCAACTTTGGCTGA

Peptide Sequence

PEP ID	Os05t0155601-00
PEP Infomation	pep chromosome:IRGSP-1.0:5:3252035:3255881:-1 gene:Os05g0155601 transcript:Os05t0155601-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin alpha-1b subunit. (Os05t0155601-00)
Sequence	MSLRPSERAEVRRSRYKVAVDADEGRRRREDNMVEIRKSRREESLLKKRRDGLPAAAAAA AAASPLLAHSSALQQKLEGLPAMVQAVQSDDSAVQLEATTQFRKLLSIERSPPIEEVINT GVVPRFIAFLQREDYPQLQFEAAWALTNIASGTSDNTKVVVESGAVPIFVKLLSSPSEDV REQAVWALGNVAGDSPKCRDLVLASGGLYPLLQQLNEHAKLSMLRNATWTLSNFCRGKPQ PNFEQVKPALSALQRLIHSQDEEVLTDACWALSYLSDGTNDKIQAVIESGVFPRLVELLM HPSASVLIPALRTVGNIVTGDDMQTQCVIDHQALPCLLNLLTNNHKKSIKKEACWTISNI TAGNREQIQAVINANIIAPLVHLLQTAEFDIKKEAAWAISNATSGGTHDQIKYLVAQGCI KPLCDLLVCPDPRIVTVCLEGLENILKVGEAEKNLGAGDVNSYAQMIDDAEGLEKIENLQ SHDNTEIYEKAVKMLESYWLEEEDDAMPSGDNAQNGFNFGNQQPNVPSGGFNFG

Transcript Sequence

Transcript ID	Os05t0155601-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3252035:3255881:-1 gene:Os05g0155601 gene_biotype:protein_coding transcript_biotype:protein_coding description:Importin alpha-1b subunit. (Os05t0155601-00)
Sequence	ATGTCGCTGCGGCCGAGCGAGCGGGCGGAGGTGCGGCGGAGCAGGTACAAGGTGGCGGTG GACGCGGACGAGGGGCGGAGGCGGAGGGAGGACAACATGGTGGAGATCCGCAAGAGCCGG CGCGAGGAGAGCCTCCTGAAGAAGCGCCGCGACGGCCTCCCCGCCGCCGCCGCGGCCGCC GCGGCGGCGTCCCCGCTGCTCGCCCACTCCTCCGCGCTCCAGCAGAAGTTGGAGGGGTTG CCGGCGATGGTGCAGGCGGTGCAGTCCGACGACAGCGCCGTGCAGCTGGAGGCCACCACG CAGTTCCGGAAGCTGCTCTCCATCGAGCGGAGTCCTCCAATTGAGGAGGTGATCAACACA GGGGTGGTGCCTCGCTTTATTGCCTTCCTCCAACGTGAGGATTATCCCCAACTCCAGTTT GAGGCTGCATGGGCACTCACTAACATTGCATCAGGCACATCAGATAACACCAAAGTGGTA GTTGAGTCTGGTGCTGTGCCCATCTTTGTCAAACTGCTTAGCTCCCCCAGTGAGGATGTC CGTGAGCAGGCTGTATGGGCTCTGGGAAATGTGGCTGGTGACTCACCAAAATGCCGTGAC CTGGTGCTTGCAAGTGGTGGGTTATACCCATTGTTGCAACAGCTTAATGAGCACGCCAAG CTCTCAATGCTCAGGAATGCCACATGGACACTGTCAAACTTCTGCCGTGGGAAGCCTCAG CCTAATTTTGAGCAGGTCAAACCAGCGCTTTCTGCACTGCAGCGCCTCATCCATTCTCAG GACGAGGAGGTCCTGACTGATGCCTGCTGGGCTCTTTCTTATTTGTCTGATGGAACTAAT GATAAGATCCAAGCTGTGATAGAATCAGGAGTGTTCCCAAGGCTTGTGGAACTTCTCATG CATCCTTCGGCTTCAGTGCTCATTCCAGCTTTGCGCACGGTGGGTAACATCGTCACTGGG GATGACATGCAGACTCAGTGTGTCATCGATCATCAAGCTCTTCCATGTCTCTTGAACCTC TTGACCAACAATCATAAGAAAAGCATCAAGAAAGAAGCATGCTGGACTATCTCAAACATC ACTGCTGGCAATAGGGAACAGATTCAGGCTGTGATCAATGCAAACATAATTGCTCCTCTA GTACATCTGCTGCAAACTGCTGAATTTGACATCAAGAAAGAGGCTGCGTGGGCAATCTCA AATGCCACTTCTGGTGGAACACATGATCAGATTAAGTACCTTGTTGCCCAGGGTTGCATC AAGCCACTCTGTGATCTGCTTGTTTGCCCAGATCCCAGGATCGTGACAGTTTGCTTGGAA GGTCTTGAGAACATCTTGAAGGTTGGAGAGGCAGAAAAGAACCTTGGGGCAGGGGATGTC AATTCCTATGCTCAGATGATTGATGATGCTGAGGGACTGGAGAAGATTGAGAACCTTCAG AGCCATGACAACACTGAAATATATGAGAAGGCAGTTAAAATGCTCGAGTCCTACTGGTTG GAGGAGGAAGATGATGCCATGCCCTCAGGTGACAACGCTCAAAACGGCTTCAACTTTGGA AACCAGCAGCCCAATGTTCCATCGGGTGGATTCAACTTTGGCTGA