Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0155100-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:3230312:3232921:1 gene:Os05g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN L18 description:Similar to 60S ribosomal protein L18. (Os05t0155100-01)
Sequence

ATGGGTATCGACCTCGTTGCCGGCGGGAGGAACAAGAAGACGAAGCGCACCGCGCCGAGG
TCGGACGATGTCTACCTCAAGCTCCTCGTCAAGCTGTACCGTTTCCTGGTGAGGAGAACC
AAGAGTAACTTCAATGCCGTGATCCTCAAGAGGCTCTTCATGAGCAAGACCAACCGCCCG
CCGCTCTCCCTGCGCCGCCTCGCCAAGTTCATGGAAGGCAAGGAGGAGAACAACATTGCT
GTGATTGTTGGTACAGTCACTGATGACAAGAGGATCCAAGAGATTCCGAAAATGAAGGTT
ACTGCCCTGAGGTTCACGGAGACGGCTAGGGCAAGGATTGTCAATGCTGGCGGCGAGTGC
CTCACCTTCGACCAGCTTGCTCTCCGTGCTCCGCTTGGGGAGAACACGGTCCTCTTGAGG
GGTCCCAAGAATGCCCGTGAGGCCGTCAGGCACTTTGGTAAGGCTCCTGGTGTGCCGCAC
AGCCACACGAAGCCATATGTGCGCTCCAAGGGAAGGAAGTTCGAGAAGGCCCGTGGCAGG
AGGAACAGCCGTGGATTCAAGGTCTAA

Peptide Sequence

PEP ID

Os05t0155100-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:3230312:3232921:1 gene:Os05g0155100 transcript:Os05t0155100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN L18 description:Similar to 60S ribosomal protein L18. (Os05t0155100-01)
Sequence

MGIDLVAGGRNKKTKRTAPRSDDVYLKLLVKLYRFLVRRTKSNFNAVILKRLFMSKTNRP
PLSLRRLAKFMEGKEENNIAVIVGTVTDDKRIQEIPKMKVTALRFTETARARIVNAGGEC
LTFDQLALRAPLGENTVLLRGPKNAREAVRHFGKAPGVPHSHTKPYVRSKGRKFEKARGR
RNSRGFKV

Transcript Sequence

Transcript ID

Os05t0155100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:3230312:3232921:1 gene:Os05g0155100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIBOSOMAL PROTEIN L18 description:Similar to 60S ribosomal protein L18. (Os05t0155100-01)
Sequence

AGCCGGAGGCCGACACGAGGTAAGAAGCCCAGAAGCCCTAGCGCCGCCGCAGCAGCAGCA
GCCATGGGTATCGACCTCGTTGCCGGCGGGAGGAACAAGAAGACGAAGCGCACCGCGCCG
AGGTCGGACGATGTCTACCTCAAGCTCCTCGTCAAGCTGTACCGTTTCCTGGTGAGGAGA
ACCAAGAGTAACTTCAATGCCGTGATCCTCAAGAGGCTCTTCATGAGCAAGACCAACCGC
CCGCCGCTCTCCCTGCGCCGCCTCGCCAAGTTCATGGAAGGCAAGGAGGAGAACAACATT
GCTGTGATTGTTGGTACAGTCACTGATGACAAGAGGATCCAAGAGATTCCGAAAATGAAG
GTTACTGCCCTGAGGTTCACGGAGACGGCTAGGGCAAGGATTGTCAATGCTGGCGGCGAG
TGCCTCACCTTCGACCAGCTTGCTCTCCGTGCTCCGCTTGGGGAGAACACGGTCCTCTTG
AGGGGTCCCAAGAATGCCCGTGAGGCCGTCAGGCACTTTGGTAAGGCTCCTGGTGTGCCG
CACAGCCACACGAAGCCATATGTGCGCTCCAAGGGAAGGAAGTTCGAGAAGGCCCGTGGC
AGGAGGAACAGCCGTGGATTCAAGGTCTAAGTCAGCTCCTGTTTGCAAGTGTTGCGATCG
GCATTGTGCGACCGTTCTGTTTGAGCAATCGACAGTAATTAGTAGTCACTTCTCTACTGA
GACTAGCAAAACTTAATTGTGTCATTTCTGAAAGATATTTTGAAGGATCCTTTCTACCTA
CCTACATGCGTTTGTGGGCAAGAAGACAATGTTTTTTGTTTCCTCTCTATTAGAGCTTGA
AAATTTTCGCCTCCATTGCTCTCTTGGTGATAGTGAAGTCATGGGCTCATGGCTTGCTGT
CATGGTGAAATGATGGTTCAGCTCATGGCTGATGTGCTTGATTATGTGGGTTTCTGTGAT
GTTATTGCATAAGTCAATGCCTGAAGCCACTCAACC