Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0153000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:3051070:3056840:1 gene:Os05g0153000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VILLIN1, VILLIN 1 description:Gelsolin family protein. (Os05t0153000-01);Gelsolin family protein. (Os05t0153000-02)
Sequence	ATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACAAGCCGGGACTGGACATTTGG TGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTGCATGGCAAGTTCTACACT GGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGCGGAGTTCGCCAGCACAAT GTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGTCTGACGGCCTCTGACAAG GCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAATATAGGGAAACACAAGGC GAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATCATCCCCATACAAGGTAGC TTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGATACAACAATGTTTAGGTGC GAAGGAGAGCATGTAGCCCGTGTAACAGAAGTACCGTTTTCACGGTCCTCCCTAGATCAC AAGGCAGTGTTTGTCGTGGACACGGAATCAAAGATCTTCCTTTTCAGTGGATGTAACTCT AGCATGCAAACAAGGGCTAAGGCTTTAGATGTTGTTAAGCACCTCAAAGAGAACCGACAT TGTGGCAGATGTGAGATTGCGACTATAGAGGATGGGAAACTTGTTGGTGACTCTGATGCT GGTGATTTCTGGAACTTATTTGGAGGCTATGCTCCTATTCCCCGTGATGTACAAGACACG GTTATGACAGAACTGATGACTACCTCATCCAAGAAACTATTTTGGATTAACAAGAGAAAC CTTGTTCCTGTGGAGACAAATCTGTTAGAAAGAGAAATGCTGAACTCGGACAGAAATTAC ATTCTGGACTGTGGCACCGAAGTATTCCTATGGATGGGTATGACAACACTGGTTTCTGAG AGGAGGACATCAGTTACTGCCCTAGAAGATTATGTGCGTTGTGAAGGAAGGCAATCGAAT GCACGTTCAGTTATATTGACAGAAGGTCATGAAACCGTTGAATTTAAGATGCATTTTCAG CATTGGCCCAAGAATGCTGTGCCAAAGTTATACGAGGCAGGGCGGGAGAAGGTGGCAGCA ATTTTCAAGCATCAGGGCTATGATGTCACAGAAATCCCAGAGGATAAACCTCGTCACTTC ATCAGTTGTAATGGTAGTCTGAAGGTTTGGTTGGTGGACAATGGTTCTGTAACCCTGCTT TGCACTGAGGAGCAGGAACAACTATACAATGGGGACTGCTATATCATACGGTATAGCTAC ATCGAAGACGGAAAAGACTATCATTTGTTCTTTGCTTGGTCTGGACTGAACAGCATAAAT GAAGATAGAGTTGCAGCAGCGTCACTAATGTCAGGCATGATTGATTCAGTAAAAGGGCAT GCGGTTGTGGCACAAGTATTCGAGGGCAGAGAACCAGAAATGTTTTTCCTAGTATTCAAG TCATTGATCATATTCAAGGGGGGCAGGAGTATGGCATATAAGAACTTCGTTTCTCAGAGA AGCGATGCAAACGGATGGTACCAGAAAAATGGGGTTGCTCTATTCCGGGTTCAAGGGCTG AAACATGATTGCATACGAGCCATTCAGGTTGATCTGGCTGCAAGTTCACTTAATTCTTCG CATTGTTACATTTTGCAAGCTGGTGGTTCTTTCTTTACCTGGCTAGGAAGCCTTTCTTCA CCAAGTGACCACAATTTACTTGACAGGATGATGGATAAGTTGTGTCCACTGAAACAATCC TTGTTGGTAAGAGAAGGTTCTGAACCTGATCGCTTCTGGGAAGCATTAGGCGGAAGATCA GAATACTTGAGAGAAAAGCAAGTCAAGGATTGGCCTGCAGATCCACATCTGTATACTTGT CATTTCGAACAAGGTCTCTTCAAGGCAAAGGAGGTATTCAGCTTCTCTCAGGATGACCTG GTAACTGAAGAGATATTGATACTGGACTGCGTCGAAGAACTCCATATTTGGGTTGGACAT CAATCTGGTGTTTTATCCAAGGAGCAAGCTCTTGATATCGGCAAGATGTTCCTTCAGGCA GGCATTCATCAGGACGGACGACGGCCAATCGACACGACAATGTATATCGTCACTGAAGGG GATGAGCCTAGATTTTTCACGAGCTTCTTCAACTGGGATTATTCCAAGCAAACAATGCTT GGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATTTCACAAAAGCTGGAGACA CCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCGAGAAGGTCGCCGGGGACA TCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCGAGGACGTTCGCCTCGGCC TCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTGTCACCGTCGCTGTCGACG CCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCGCCGGCGTCGTGGAACTCG ACGCCGTCCACGGTGGCGCGGCGGCTCTTCCCGCCCTCGCTGCACGCGTCGGCGGAGGCG GTTGCCACCGGGACCCCTCGCCGGCGGTGA

Peptide Sequence

PEP ID	Os05t0153000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:3051070:3056840:1 gene:Os05g0153000 transcript:Os05t0153000-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VILLIN1, VILLIN 1 description:Gelsolin family protein. (Os05t0153000-01);Gelsolin family protein. (Os05t0153000-02)
Sequence	MKGVDDAFLGVGDKPGLDIWCIMGSNLIAIEKSLHGKFYTGNTYIILSTVELKSGVRQHN VHYWVGEEAKEEDCLTASDKAIELDVALGSNTVQYRETQGEESDKFLSYFKPCIIPIQGS LSSHMRIYGDKSKDTTMFRCEGEHVARVTEVPFSRSSLDHKAVFVVDTESKIFLFSGCNS SMQTRAKALDVVKHLKENRHCGRCEIATIEDGKLVGDSDAGDFWNLFGGYAPIPRDVQDT VMTELMTTSSKKLFWINKRNLVPVETNLLEREMLNSDRNYILDCGTEVFLWMGMTTLVSE RRTSVTALEDYVRCEGRQSNARSVILTEGHETVEFKMHFQHWPKNAVPKLYEAGREKVAA IFKHQGYDVTEIPEDKPRHFISCNGSLKVWLVDNGSVTLLCTEEQEQLYNGDCYIIRYSY IEDGKDYHLFFAWSGLNSINEDRVAAASLMSGMIDSVKGHAVVAQVFEGREPEMFFLVFK SLIIFKGGRSMAYKNFVSQRSDANGWYQKNGVALFRVQGLKHDCIRAIQVDLAASSLNSS HCYILQAGGSFFTWLGSLSSPSDHNLLDRMMDKLCPLKQSLLVREGSEPDRFWEALGGRS EYLREKQVKDWPADPHLYTCHFEQGLFKAKEVFSFSQDDLVTEEILILDCVEELHIWVGH QSGVLSKEQALDIGKMFLQAGIHQDGRRPIDTTMYIVTEGDEPRFFTSFFNWDYSKQTML GNSFERKLAILKGISQKLETPERSLRKSSSSSLPRRSPGTSSSEPTTPEQRAAARTFASA STGKLLRERSPAALSPSLSTPSPSPRSRSSASSSPASWNSTPSTVARRLFPPSLHASAEA VATGTPRRR

Transcript Sequence

Transcript ID	Os05t0153000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:3051070:3056840:1 gene:Os05g0153000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VILLIN1, VILLIN 1 description:Gelsolin family protein. (Os05t0153000-01);Gelsolin family protein. (Os05t0153000-02)
Sequence	ATTTCTTCTCAACTCGCCTCAGCTGCATCCTCATCTTGGTCAGTGAGCGAGTGAGTGAAG TGCAGAGCTATGCCTGTGCTGCGGCGGTGAGCTTTGCAGCGACCTCCTCTCTCTCTGCTG CTGCCGGCGACGGCGGCCATGAAGGGCGTCGACGATGCATTCCTCGGCGTCGGCGACAAG CCGGGACTGGACATTTGGTGCATTATGGGTAGCAATCTAATTGCAATTGAAAAATCATTG CATGGCAAGTTCTACACTGGGAACACCTACATCATACTAAGTACCGTTGAGCTTAAAAGC GGAGTTCGCCAGCACAATGTGCACTACTGGGTAGGGGAGGAAGCCAAAGAGGAGGATTGT CTGACGGCCTCTGACAAGGCTATTGAGTTGGATGTAGCACTGGGCTCGAACACGGTCCAA TATAGGGAAACACAAGGCGAAGAATCCGACAAGTTCTTGTCATACTTCAAACCATGCATC ATCCCCATACAAGGTAGCTTGTCTTCGCACATGAGAATATATGGAGATAAATCAAAGGAT ACAACAATGTTTAGGTGCGAAGGAGAGCATGTAGCCCGTGTAACAGAAGTACCGTTTTCA CGGTCCTCCCTAGATCACAAGGCAGTGTTTGTCGTGGACACGGAATCAAAGATCTTCCTT TTCAGTGGATGTAACTCTAGCATGCAAACAAGGGCTAAGGCTTTAGATGTTGTTAAGCAC CTCAAAGAGAACCGACATTGTGGCAGATGTGAGATTGCGACTATAGAGGATGGGAAACTT GTTGGTGACTCTGATGCTGGTGATTTCTGGAACTTATTTGGAGGCTATGCTCCTATTCCC CGTGATGTACAAGACACGGTTATGACAGAACTGATGACTACCTCATCCAAGAAACTATTT TGGATTAACAAGAGAAACCTTGTTCCTGTGGAGACAAATCTGTTAGAAAGAGAAATGCTG AACTCGGACAGAAATTACATTCTGGACTGTGGCACCGAAGTATTCCTATGGATGGGTATG ACAACACTGGTTTCTGAGAGGAGGACATCAGTTACTGCCCTAGAAGATTATGTGCGTTGT GAAGGAAGGCAATCGAATGCACGTTCAGTTATATTGACAGAAGGTCATGAAACCGTTGAA TTTAAGATGCATTTTCAGCATTGGCCCAAGAATGCTGTGCCAAAGTTATACGAGGCAGGG CGGGAGAAGGTGGCAGCAATTTTCAAGCATCAGGGCTATGATGTCACAGAAATCCCAGAG GATAAACCTCGTCACTTCATCAGTTGTAATGGTAGTCTGAAGGTTTGGTTGGTGGACAAT GGTTCTGTAACCCTGCTTTGCACTGAGGAGCAGGAACAACTATACAATGGGGACTGCTAT ATCATACGGTATAGCTACATCGAAGACGGAAAAGACTATCATTTGTTCTTTGCTTGGTCT GGACTGAACAGCATAAATGAAGATAGAGTTGCAGCAGCGTCACTAATGTCAGGCATGATT GATTCAGTAAAAGGGCATGCGGTTGTGGCACAAGTATTCGAGGGCAGAGAACCAGAAATG TTTTTCCTAGTATTCAAGTCATTGATCATATTCAAGGGGGGCAGGAGTATGGCATATAAG AACTTCGTTTCTCAGAGAAGCGATGCAAACGGATGGTACCAGAAAAATGGGGTTGCTCTA TTCCGGGTTCAAGGGCTGAAACATGATTGCATACGAGCCATTCAGGTTGATCTGGCTGCA AGTTCACTTAATTCTTCGCATTGTTACATTTTGCAAGCTGGTGGTTCTTTCTTTACCTGG CTAGGAAGCCTTTCTTCACCAAGTGACCACAATTTACTTGACAGGATGATGGATAAGTTG TGTCCACTGAAACAATCCTTGTTGGTAAGAGAAGGTTCTGAACCTGATCGCTTCTGGGAA GCATTAGGCGGAAGATCAGAATACTTGAGAGAAAAGCAAGTCAAGGATTGGCCTGCAGAT CCACATCTGTATACTTGTCATTTCGAACAAGGTCTCTTCAAGGCAAAGGAGGTATTCAGC TTCTCTCAGGATGACCTGGTAACTGAAGAGATATTGATACTGGACTGCGTCGAAGAACTC CATATTTGGGTTGGACATCAATCTGGTGTTTTATCCAAGGAGCAAGCTCTTGATATCGGC AAGATGTTCCTTCAGGCAGGCATTCATCAGGACGGACGACGGCCAATCGACACGACAATG TATATCGTCACTGAAGGGGATGAGCCTAGATTTTTCACGAGCTTCTTCAACTGGGATTAT TCCAAGCAAACAATGCTTGGCAACTCATTTGAGAGGAAGCTGGCAATCCTGAAAGGAATT TCACAAAAGCTGGAGACACCGGAGAGAAGCCTACGCAAATCATCATCGTCTTCGCTGCCG AGAAGGTCGCCGGGGACATCGTCGTCGGAGCCGACCACGCCGGAGCAGCGAGCGGCGGCG AGGACGTTCGCCTCGGCCTCTACCGGGAAGCTACTCAGGGAGAGATCACCGGCCGCGCTG TCACCGTCGCTGTCGACGCCTTCGCCGTCTCCGAGAAGCCGCTCCTCCGCCTCCTCGTCG CCGGCGTCGTGGAACTCGACGCCGTCCACGGTGGCGCGGCGGCTCTTCCCGCCCTCGCTG CACGCGTCGGCGGAGGCGGTTGCCACCGGGACCCCTCGCCGGCGGTGAGCTTCAGCTAAC GCTCACCTGCAACTGCATATGCCTGTACCATTAAGAATTTGAGATTCAGATGAAATTCAA AGAACATCGGCCATCTTTTT