Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0151200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:2969525:2970353:1 gene:Os05g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:TspO/MBR-related protein family protein. (Os05t0151200-01)
Sequence

ATGGCCTCCGCCGCCGCCGCCGCCGCCGCCGCGCAGGAAGGGATCACTCACCGCGCCGTG
AGAGGGGATGGCGGCGATGCTGCGGCGACGGCGGGTGGTGGCGAGGCGGCGAGCCGGGAT
CCGAGGAAGGCGGGGCGCGCCAAGCGCGGGCTGCGGTCGCTCGCCGCCGCCGTGTCCGTG
TCGGTTGCGCTGATGGCCGCCTCGTTCTACGGCTCCGGGTCGGCGTCGGCGTCGGCGTCG
GCGGCGAGGGTGACGGTCGCGCGGGCGGGGTCGGTGGCGGCGGAGGCGGTGATGGCGCTG
GCGGCGTGGATGGTGTGGGCGGAGGGCGGGCTCCACCGCCGCCCCGGCGCGACGCTGGCG
CCGTTCGTGGCGCAGCTGGTCGCCGCGCTGGCGTGGGCGCCGCTCGCGCTGGGGCTCGCC
GCGCCCGCGGCCGGGCTGGCGTGCTGCGCGGCGATGGCCGCCGGCGCCGCGGCGTGCGCG
CGCGGGTTCGGCGGCGTCAACCCCGTCGCCGGCGACCTCGCCAAGCCGTGCGTCGCCTGG
GCCGTCCTCCTCGCAGTCATCAACTACAAGATGATGAACTGA

Peptide Sequence

PEP ID

Os05t0151200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:2969525:2970353:1 gene:Os05g0151200 transcript:Os05t0151200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:TspO/MBR-related protein family protein. (Os05t0151200-01)
Sequence

MASAAAAAAAAQEGITHRAVRGDGGDAAATAGGGEAASRDPRKAGRAKRGLRSLAAAVSV
SVALMAASFYGSGSASASASAARVTVARAGSVAAEAVMALAAWMVWAEGGLHRRPGATLA
PFVAQLVAALAWAPLALGLAAPAAGLACCAAMAAGAAACARGFGGVNPVAGDLAKPCVAW
AVLLAVINYKMMN

Transcript Sequence

Transcript ID

Os05t0151200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:2969525:2970353:1 gene:Os05g0151200 gene_biotype:protein_coding transcript_biotype:protein_coding description:TspO/MBR-related protein family protein. (Os05t0151200-01)
Sequence

ATCGGATCATCGATCGCAAGAACCATCGCCACGCGCGCGCGAGAGAAATCTGTGTCTGCT
CGATCGGATCAGAGCACAGCAGTAGCCATGGCCTCCGCCGCCGCCGCCGCCGCCGCCGCG
CAGGAAGGGATCACTCACCGCGCCGTGAGAGGGGATGGCGGCGATGCTGCGGCGACGGCG
GGTGGTGGCGAGGCGGCGAGCCGGGATCCGAGGAAGGCGGGGCGCGCCAAGCGCGGGCTG
CGGTCGCTCGCCGCCGCCGTGTCCGTGTCGGTTGCGCTGATGGCCGCCTCGTTCTACGGC
TCCGGGTCGGCGTCGGCGTCGGCGTCGGCGGCGAGGGTGACGGTCGCGCGGGCGGGGTCG
GTGGCGGCGGAGGCGGTGATGGCGCTGGCGGCGTGGATGGTGTGGGCGGAGGGCGGGCTC
CACCGCCGCCCCGGCGCGACGCTGGCGCCGTTCGTGGCGCAGCTGGTCGCCGCGCTGGCG
TGGGCGCCGCTCGCGCTGGGGCTCGCCGCGCCCGCGGCCGGGCTGGCGTGCTGCGCGGCG
ATGGCCGCCGGCGCCGCGGCGTGCGCGCGCGGGTTCGGCGGCGTCAACCCCGTCGCCGGC
GACCTCGCCAAGCCGTGCGTCGCCTGGGCCGTCCTCCTCGCAGTCATCAACTACAAGATG
ATGAACTGATCGATCAAAAGCTTGTGTCTTTTACGACGACATGTGTGTGCAGTGTTTGCT
ATGTTTGATCTCCTCCTGTGAATGTAATGGAACACTGCCTGCAGTGGCAGCCACAGCTTC
CTGAATGTTTTGCTACATTATATAAATACAACTTCAGCTGCTTGTATGT