Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0150300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2874325:2884462:1 gene:Os05g0150300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1). (Os05t0150300-01)
Sequence	ATGGGGAAGCCGGGGAAGTATGGCGACGGCGACGACGACGACTCGGAGGAGGAGCAGCTC TCCCCTTCGTCTTCCGCCGGCGAGGAGGAGGAGGAGGAGGTAGAAGAGGAAGAGGGGGAG GAGCAGCAGGAGGAGCAGGGGGAGGAGGAGGAGGGGTTTAGCGGGGACGAGGAGGAGCAG GAGGTGGAGGGTGAGGCGGATGGGGAGCAAGTGGAGGAGGAGGAAGAGGAGGAGTCTAGT GTCGGGGAGGAGGAAGCAGAGGCGGAGGGTGAGGAGGAGGAAGAGGAGGTGGAGGAGGAG CAGGGGGCTGGGGAAGAGGAAGAGGAGGAGGTTGATGAGGAGGAGATCGAGGCGGTCACC ACCGGCGCCGGAGGGGACGACGACGACGAAGAAGTGGGCGATGACGGGGGCGCGGAGGAG GAGTCGCAGTCCACGGAGGACGACGAGGTCGCCGCCGGGAAGGATGGCGGCGGTGAAGAT GGCGACAAGTTGGAAGATGCTACTGGAAACGCAGAGATCGGGAAGCGGGAGCGAGCAAAG CTCAGGGAGATGCAAAAGCTGAAGAAGCACAAAATCCAGGAAATACTGGATGCCCAAAAT AAGGCCATTGATGCTGACATGAACAACAAGGGGAAGGGACGTCTGAAGTATCTCCTGCAG CAAACTGAAATATTTGCTCATTTTGCGAAAGGAAACCAATCGACAGAGAAGAAATCACGT GGAAGGGGACGTCATGCATCAAAGATGACAGAGGAGGAAGAAGATGAGGAGTATCTCAAG GAGGAGGAAGATGCCCTTGATGGTGCAGGAGGGACCCGTCTGGTTTCACAACCATCATGC ATAAAAGGAAAGATGAGAGATTACCAACTAGCTGGACTTAATTGGCTCATACGCTTGTAT GAGAATGGCATCAATGGAATATTGGCTGATGAGATGGGTCTTGGAAAAACCCTTCAAACT ATATCACTGCTTGGATATTTGCATGAGTTTAGAGGAATAACCGGTCCCCACATGGTTGTT GCACCAAAGTCCACTCTTGGGAACTGGATGAAGGAAATACAACGGTTTTGTCCTGTTCTG CGTGCTATCAAGTTCTTAGGAAACCCCGAAGAAAGGAACCATATCCGGGAAAATTTGTTA GTCCCAGGGAAGTTTGACGTCTGTGTTACTAGTTTTGAAATGGCAATTAAAGAAAAAACT GCATTGAAGCGTTTCAGCTGGCGTTATATTATTATTGATGAAGCCCACCGGATAAAAAAT GAAAATTCCCTTCTCTCTAAGACTATGAGGATTTACAATACTAATTATCGTCTCCTCATT ACGGGCACTCCACTACAGAATAATCTTCATGAACTTTGGTCTCTTCTCAACTTCTTGTTG CCTGAAATATTTAGCTCTGCTGAGACTTTTGATGATTGGTTCCAAATCTCAGGGGAAAAT GATCAACATGAAGTTGTTCAGCAGCTTCATAAGGTTCTTCGTCCATTTCTGCTTCGGAGG CTTAAATCTGATGTTGAGAAAGGTTTACCACCAAAAAAGGAAACTATACTTAAAGTTGGA ATGTCTGAGATGCAAAAACAATATTATCGTGCTCTGCTTCAGAAAGATCTGGAGGTTGTC AATGCCGGTGGTGAACGCAAACGCCTTCTTAACATAGCCATGCAATTGCGGAAGTGCTGC AACCATCCATATTTATTCCAAGGTGCTGAGCCTGGTCCACCCTATACCACTGGAGACCAT CTAATTGAGAATGCAGGAAAAATGGTTCTGTTAGATAAATTACTTCCCAAGCTAAAGGAA CGTGATTCCAGAGTACTTATTTTCTCACAGATGACTAGGCTCTTGGACATCTTGGAAGAT TATCTGATGTACAAGGGGTATCAATATTGCCGAATTGATGGGAATACTGGTGGTGAAGAT CGTGATGCTTCGATTGAAGCTTTCAACAAGCCAGGGAGTGAAAAATTTGTTTTCTTGCTT TCGACTAGGGCAGGTGGTCTTGGGATAAATCTTGCTACTGCTGATGTTGTTATTCTTTAT GACAGTGACTGGAATCCTCAAGTGGATCTGCAAGCGCAAGATCGTGCACATAGAATTGGT CAAAAGAAAGAAGTTCAAGTTTTTCGTTTCTGCACTGAGTATACAATTGAGGAAAAGGTG ATTGAGAGAGCTTATAAGAAGCTTGCCCTGGATGCTTTGGTCATACAACAGGGTCGATTG GCAGAGCAGAAAGCTGTCAATAAGGATGAGCTATTGCAGATGGTCAGATTTGGTGCTGAA ATGGTATTCAGCTCCAAGGATAGCACAATAACAGATGAAGATATTGACCGCATCATCGCT AAGGGAGAAGAAGCAACAGCACAACTTGATGCAAAAATGAAGAAGTTCACAGAAGATGCT ATTAAGTTCAAAATGGATGACACTGCTGAACTGTATGATTTTGATGATGATAAGGATGAA AACAAACTTGATTTTAAGAAGTTGGTCACTGACAACTGGATAGAGCCAACCAGCAGAAGA GAAAGGAAGCGAAACTACTCTGAGTCTGATTATTTCAAGCAAGCACTTCGCCAAGGTGCA CCAGCAAAACCTAGGGAACCGAGAATTCCTCGAATGCCACACTTGCATGATTTCCAGTTC TTCAACACTCAGAGACTCAATGAATTATATGAGAAGGAAGTCAAATACCTTGTGCAAGCA AATCAGAAAAAGGATACGGTTGGTGAGGGTGATGACGAAGATCAACTGGAACCGTTGACT GTGGAGGAGCAAGAAGAGAAAGAGCAGCTATTGGAAGAGGGCTTTTCGACATGGACAAGG AGGGACTTCAATACATTCATCCGTGCTTGTGAGAAGTACGGTCGTAATGACATAAAGAAC ATATCCTCTGAAATGGAGGGGAAAACAGAAGAGGAGGTGCAGCGGTACGCTAAAGTTTTC CAGGAAAGATACAAGGAATTAAATGATTATGACCGAGTTATTAAGAACATTGAGAAAGGA GAAGCAAGGATATACCGGAAGGATGAGATTATGAAAGCTATTGGGAAAAAGCTAGACCGC TATAAGAACCCTTGGTTAGAGTTGAAAATTCAGTATGGCCAGAATAAAGGGAAGTTATAC AACGAAGAATGTGATCGTTTTATGTTATGCATGGTGCACAAACTCGGATACGGAAACTGG GATGAACTGAAAGCAGCCTTTCGCATGTCGCCCTTGTTCCGATTTGATTGGTTTGTGAAG TCTAGAACAACCCAAGAGCTAGCTAGGAGGTGCGAGACCCTCATTCGTCTAGTGGAGAAG GAGAACCAAGAATATGATGAGCGTGAGAGATTGGCCAGGAAAGATAAGAAGAATATGTCG CCAGCAAAGCGTTCTTCATCAAGGTCGCTCGATACCCCTCCACAAAGCTCTTCGAAGAGG AGGCGCCAGTCCTACACTGAAGCCAATGCAGGCTCGGGAAGGAGAAGGCGAGGGTGA

Peptide Sequence

PEP ID	Os05t0150300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2874325:2884462:1 gene:Os05g0150300 transcript:Os05t0150300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1). (Os05t0150300-01)
Sequence	MGKPGKYGDGDDDDSEEEQLSPSSSAGEEEEEEVEEEEGEEQQEEQGEEEEGFSGDEEEQ EVEGEADGEQVEEEEEEESSVGEEEAEAEGEEEEEEVEEEQGAGEEEEEEVDEEEIEAVT TGAGGDDDDEEVGDDGGAEEESQSTEDDEVAAGKDGGGEDGDKLEDATGNAEIGKRERAK LREMQKLKKHKIQEILDAQNKAIDADMNNKGKGRLKYLLQQTEIFAHFAKGNQSTEKKSR GRGRHASKMTEEEEDEEYLKEEEDALDGAGGTRLVSQPSCIKGKMRDYQLAGLNWLIRLY ENGINGILADEMGLGKTLQTISLLGYLHEFRGITGPHMVVAPKSTLGNWMKEIQRFCPVL RAIKFLGNPEERNHIRENLLVPGKFDVCVTSFEMAIKEKTALKRFSWRYIIIDEAHRIKN ENSLLSKTMRIYNTNYRLLITGTPLQNNLHELWSLLNFLLPEIFSSAETFDDWFQISGEN DQHEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSEMQKQYYRALLQKDLEVV NAGGERKRLLNIAMQLRKCCNHPYLFQGAEPGPPYTTGDHLIENAGKMVLLDKLLPKLKE RDSRVLIFSQMTRLLDILEDYLMYKGYQYCRIDGNTGGEDRDASIEAFNKPGSEKFVFLL STRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKV IERAYKKLALDALVIQQGRLAEQKAVNKDELLQMVRFGAEMVFSSKDSTITDEDIDRIIA KGEEATAQLDAKMKKFTEDAIKFKMDDTAELYDFDDDKDENKLDFKKLVTDNWIEPTSRR ERKRNYSESDYFKQALRQGAPAKPREPRIPRMPHLHDFQFFNTQRLNELYEKEVKYLVQA NQKKDTVGEGDDEDQLEPLTVEEQEEKEQLLEEGFSTWTRRDFNTFIRACEKYGRNDIKN ISSEMEGKTEEEVQRYAKVFQERYKELNDYDRVIKNIEKGEARIYRKDEIMKAIGKKLDR YKNPWLELKIQYGQNKGKLYNEECDRFMLCMVHKLGYGNWDELKAAFRMSPLFRFDWFVK SRTTQELARRCETLIRLVEKENQEYDERERLARKDKKNMSPAKRSSSRSLDTPPQSSSKR RRQSYTEANAGSGRRRRG

Transcript Sequence

Transcript ID	Os05t0150300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2874325:2884462:1 gene:Os05g0150300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Possible global transcription activator SNF2L1 (SWI/SNF related matrix associated actin dependent regulator of chromatin subfamily A member 1). (Os05t0150300-01)
Sequence	ATTTCTTTCCTCTTCCGTTTCTTCACTAGTTCATTTCACGCCGCCCCCGCGCGAGCGGCG ACAAGGCGAAACCGCTTCAATATAAGATCACCCCAATCCCCCAATTCGGCAACTCCAATC CAATTCAATTCCCCACCCCCGATCCGCCTCTCGCAAATCTCCCGAAACCCTAGCCGCCAC CGCCGCCGCCGCCGCCTCGAGCGAGGCGTGATGGGGAAGCCGGGGAAGTATGGCGACGGC GACGACGACGACTCGGAGGAGGAGCAGCTCTCCCCTTCGTCTTCCGCCGGCGAGGAGGAG GAGGAGGAGGTAGAAGAGGAAGAGGGGGAGGAGCAGCAGGAGGAGCAGGGGGAGGAGGAG GAGGGGTTTAGCGGGGACGAGGAGGAGCAGGAGGTGGAGGGTGAGGCGGATGGGGAGCAA GTGGAGGAGGAGGAAGAGGAGGAGTCTAGTGTCGGGGAGGAGGAAGCAGAGGCGGAGGGT GAGGAGGAGGAAGAGGAGGTGGAGGAGGAGCAGGGGGCTGGGGAAGAGGAAGAGGAGGAG GTTGATGAGGAGGAGATCGAGGCGGTCACCACCGGCGCCGGAGGGGACGACGACGACGAA GAAGTGGGCGATGACGGGGGCGCGGAGGAGGAGTCGCAGTCCACGGAGGACGACGAGGTC GCCGCCGGGAAGGATGGCGGCGGTGAAGATGGCGACAAGTTGGAAGATGCTACTGGAAAC GCAGAGATCGGGAAGCGGGAGCGAGCAAAGCTCAGGGAGATGCAAAAGCTGAAGAAGCAC AAAATCCAGGAAATACTGGATGCCCAAAATAAGGCCATTGATGCTGACATGAACAACAAG GGGAAGGGACGTCTGAAGTATCTCCTGCAGCAAACTGAAATATTTGCTCATTTTGCGAAA GGAAACCAATCGACAGAGAAGAAATCACGTGGAAGGGGACGTCATGCATCAAAGATGACA GAGGAGGAAGAAGATGAGGAGTATCTCAAGGAGGAGGAAGATGCCCTTGATGGTGCAGGA GGGACCCGTCTGGTTTCACAACCATCATGCATAAAAGGAAAGATGAGAGATTACCAACTA GCTGGACTTAATTGGCTCATACGCTTGTATGAGAATGGCATCAATGGAATATTGGCTGAT GAGATGGGTCTTGGAAAAACCCTTCAAACTATATCACTGCTTGGATATTTGCATGAGTTT AGAGGAATAACCGGTCCCCACATGGTTGTTGCACCAAAGTCCACTCTTGGGAACTGGATG AAGGAAATACAACGGTTTTGTCCTGTTCTGCGTGCTATCAAGTTCTTAGGAAACCCCGAA GAAAGGAACCATATCCGGGAAAATTTGTTAGTCCCAGGGAAGTTTGACGTCTGTGTTACT AGTTTTGAAATGGCAATTAAAGAAAAAACTGCATTGAAGCGTTTCAGCTGGCGTTATATT ATTATTGATGAAGCCCACCGGATAAAAAATGAAAATTCCCTTCTCTCTAAGACTATGAGG ATTTACAATACTAATTATCGTCTCCTCATTACGGGCACTCCACTACAGAATAATCTTCAT GAACTTTGGTCTCTTCTCAACTTCTTGTTGCCTGAAATATTTAGCTCTGCTGAGACTTTT GATGATTGGTTCCAAATCTCAGGGGAAAATGATCAACATGAAGTTGTTCAGCAGCTTCAT AAGGTTCTTCGTCCATTTCTGCTTCGGAGGCTTAAATCTGATGTTGAGAAAGGTTTACCA CCAAAAAAGGAAACTATACTTAAAGTTGGAATGTCTGAGATGCAAAAACAATATTATCGT GCTCTGCTTCAGAAAGATCTGGAGGTTGTCAATGCCGGTGGTGAACGCAAACGCCTTCTT AACATAGCCATGCAATTGCGGAAGTGCTGCAACCATCCATATTTATTCCAAGGTGCTGAG CCTGGTCCACCCTATACCACTGGAGACCATCTAATTGAGAATGCAGGAAAAATGGTTCTG TTAGATAAATTACTTCCCAAGCTAAAGGAACGTGATTCCAGAGTACTTATTTTCTCACAG ATGACTAGGCTCTTGGACATCTTGGAAGATTATCTGATGTACAAGGGGTATCAATATTGC CGAATTGATGGGAATACTGGTGGTGAAGATCGTGATGCTTCGATTGAAGCTTTCAACAAG CCAGGGAGTGAAAAATTTGTTTTCTTGCTTTCGACTAGGGCAGGTGGTCTTGGGATAAAT CTTGCTACTGCTGATGTTGTTATTCTTTATGACAGTGACTGGAATCCTCAAGTGGATCTG CAAGCGCAAGATCGTGCACATAGAATTGGTCAAAAGAAAGAAGTTCAAGTTTTTCGTTTC TGCACTGAGTATACAATTGAGGAAAAGGTGATTGAGAGAGCTTATAAGAAGCTTGCCCTG GATGCTTTGGTCATACAACAGGGTCGATTGGCAGAGCAGAAAGCTGTCAATAAGGATGAG CTATTGCAGATGGTCAGATTTGGTGCTGAAATGGTATTCAGCTCCAAGGATAGCACAATA ACAGATGAAGATATTGACCGCATCATCGCTAAGGGAGAAGAAGCAACAGCACAACTTGAT GCAAAAATGAAGAAGTTCACAGAAGATGCTATTAAGTTCAAAATGGATGACACTGCTGAA CTGTATGATTTTGATGATGATAAGGATGAAAACAAACTTGATTTTAAGAAGTTGGTCACT GACAACTGGATAGAGCCAACCAGCAGAAGAGAAAGGAAGCGAAACTACTCTGAGTCTGAT TATTTCAAGCAAGCACTTCGCCAAGGTGCACCAGCAAAACCTAGGGAACCGAGAATTCCT CGAATGCCACACTTGCATGATTTCCAGTTCTTCAACACTCAGAGACTCAATGAATTATAT GAGAAGGAAGTCAAATACCTTGTGCAAGCAAATCAGAAAAAGGATACGGTTGGTGAGGGT GATGACGAAGATCAACTGGAACCGTTGACTGTGGAGGAGCAAGAAGAGAAAGAGCAGCTA TTGGAAGAGGGCTTTTCGACATGGACAAGGAGGGACTTCAATACATTCATCCGTGCTTGT GAGAAGTACGGTCGTAATGACATAAAGAACATATCCTCTGAAATGGAGGGGAAAACAGAA GAGGAGGTGCAGCGGTACGCTAAAGTTTTCCAGGAAAGATACAAGGAATTAAATGATTAT GACCGAGTTATTAAGAACATTGAGAAAGGAGAAGCAAGGATATACCGGAAGGATGAGATT ATGAAAGCTATTGGGAAAAAGCTAGACCGCTATAAGAACCCTTGGTTAGAGTTGAAAATT CAGTATGGCCAGAATAAAGGGAAGTTATACAACGAAGAATGTGATCGTTTTATGTTATGC ATGGTGCACAAACTCGGATACGGAAACTGGGATGAACTGAAAGCAGCCTTTCGCATGTCG CCCTTGTTCCGATTTGATTGGTTTGTGAAGTCTAGAACAACCCAAGAGCTAGCTAGGAGG TGCGAGACCCTCATTCGTCTAGTGGAGAAGGAGAACCAAGAATATGATGAGCGTGAGAGA TTGGCCAGGAAAGATAAGAAGAATATGTCGCCAGCAAAGCGTTCTTCATCAAGGTCGCTC GATACCCCTCCACAAAGCTCTTCGAAGAGGAGGCGCCAGTCCTACACTGAAGCCAATGCA GGCTCGGGAAGGAGAAGGCGAGGGTGATCTGATTATTGTTCGTTCCTCCCCCCATATGCA TTTAGGGAGCTCATTTGGAGGTTGACATGAAACCCAAGGGGAAACCCCAGATACATCCCA ATTGTCTAGCAGTAGCTTTAGCTCAAAAAAAAAAAAAAAAACTAGCAGACATAACTCTAG TGAGATGGTTAGCTTGTATACCGGTTAAAGTGGTTGTGTTTTAAAGTTTTAAATTGGACG GGCAACATTACAAATTTTAGGTGATCATAACTATAACAAGTAGTTGATCTCTCTTTTGGA GACATCAATCAAATAAAACAAAGTTGCTTTTACCTGT