Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0149900-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:2852889:2860214:1 gene:Os05g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tetratricopeptide repeat domain containing protein, ANAPHASE-PROMOTING COMPLEX 7 description:Tetratricopeptide-like helical domain containing protein. (Os05t0149900-01);Similar to predicted protein. (Os05t0149900-02);Similar to tetratricopeptide repeat-containing protein. (Os05t0149900-03)
Sequence	TGCAAAACATGGCCTCTATGTTGCCTGCAGATGGAAGGGATTCCTTCTAAAGCGAGGACT CTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCGTGCAGCT GCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTATTACAGCT TTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGCACCAAAT CGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCGCTATGTT GAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATATCTAGAC TTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGTTGAAGCC ATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAATTGATCCA AACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGACTACACA AAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGAAACATGT CTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATATGCTGAA AAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAATCTTCAT CTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGAACTTAGG GCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAAATGCAAA GATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAAAGCTCTC AAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAGGAAGTTC TATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTTGGCTGAT CTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATATCTAAGA CAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAACGAATATG CTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAATGAGGCC GCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGACGCGCCT GAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGCTGAACTA CTGTAG

Peptide Sequence

PEP ID	Os05t0149900-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:2852889:2860214:1 gene:Os05g0149900 transcript:Os05t0149900-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tetratricopeptide repeat domain containing protein, ANAPHASE-PROMOTING COMPLEX 7 description:Tetratricopeptide-like helical domain containing protein. (Os05t0149900-01);Similar to predicted protein. (Os05t0149900-02);Similar to tetratricopeptide repeat-containing protein. (Os05t0149900-03)
Sequence	CKTWPLCCLQMEGIPSKARTLKMNLMLGKLYRISRNNRAAAVCYKECLRQCPYVFEAITA LAEMGLSSKEFSLIFSQAPNRGGKAPGDSLDAQRWWNRYVEAQCCIASHDYKGGLDIYLD LMQRFPNNVHILLEIAKVEAIIGRNDEAIMNFEKARLIDPNIMTYMDEYAILLKSKSDYT KLNKLVHDMLHIDPARPETCLALAALWERKDERKALTYAEKSLRVDDRHITGYIMKGNLH LLLNRPDLAVTDFRGAQELRADLRSYQGLVRAYLALSKCKDALFTAREAMKVMHQSAKAL KLVGDVHAISSSGREKARKFYESAIRLEPGFLGAALALADLHVAEGRNKDAVLLLERYLR QWTDDSLHIKLAQVFAATNMLSDALSHYQSALRINPHNEAAKKGLERLEKQMKGVDPDAP EEDEENEADDVDGDQDDAELL

Transcript Sequence

Transcript ID	Os05t0149900-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2852889:2860214:1 gene:Os05g0149900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:tetratricopeptide repeat domain containing protein, ANAPHASE-PROMOTING COMPLEX 7 description:Tetratricopeptide-like helical domain containing protein. (Os05t0149900-01);Similar to predicted protein. (Os05t0149900-02);Similar to tetratricopeptide repeat-containing protein. (Os05t0149900-03)
Sequence	AAAAACTTTTTCCCCGAGTAGCCTCGCCGTCGCCGTCGCCGGAGATGGAGGCGGCGCGGG AGTCAATGGCGGCGCTCGTCGACGCCGGCCTCTACGACTGCGCCCAGACGCTCGGGTGCT TTCTTGTGTCTTCATCACCTGCGAGCAGCGAGGCTGGTATGTCCATGAAGGTGGAAAGCT TGGTACTGCATGGTGATGCTTTGCATGGAGAGAAAGAATTTCGCAGGGCACTGAGTGCCT ACAAACAAGCTATGCAATACAGCAAAAACATTCCTAGGCAAGCAACAAGTAATACTAGAA GCTCAGTAACTGCCACTGGCCGGTCTCCTTCTCCAAATTCTTCAAGTCTTGCACCACTCA ATGAAAATGAGGTGAAATTTAAAATTGCACTTTGCTATTCTGCTCTACGTGAGCATCGTG AAGCACTTCAAGAGGATGACTCGGACTCACTTGTGGTAGCTTCTTCTGTATGATGGAAGA CATATGATGCAAAACATGGCCTCTATGTTGCCTGCAGATGGAAGGGATTCCTTCTAAAGC GAGGACTCTAAAAATGAATCTGATGTTAGGGAAGCTATATCGGATATCCAGAAATAATCG TGCAGCTGCTGTATGTTATAAAGAGTGCCTGAGGCAATGCCCTTATGTTTTTGAGGCTAT TACAGCTTTGGCTGAAATGGGGCTTTCTTCAAAGGAGTTCTCTTTGATATTCTCACAAGC ACCAAATCGAGGAGGCAAGGCTCCAGGTGACTCTTTAGATGCACAGCGTTGGTGGAACCG CTATGTTGAGGCCCAATGTTGCATTGCTTCACATGATTATAAAGGTGGCCTTGACATATA TCTAGACTTAATGCAGCGATTCCCGAACAATGTGCACATCTTGCTGGAAATTGCTAAGGT TGAAGCCATCATAGGTAGGAATGATGAAGCTATCATGAACTTTGAAAAGGCTCGGTTAAT TGATCCAAACATCATGACATATATGGATGAGTATGCAATTCTCCTTAAGTCAAAATCTGA CTACACAAAGCTTAACAAGTTGGTACATGATATGCTGCATATTGACCCTGCAAGACCAGA AACATGTCTTGCTCTTGCAGCATTGTGGGAAAGAAAAGATGAAAGAAAAGCTTTGACATA TGCTGAAAAGAGTCTCCGAGTTGATGATAGACATATAACTGGATATATCATGAAGGGAAA TCTTCATCTTTTGTTGAATCGACCTGATTTGGCAGTCACAGACTTCAGGGGAGCTCAAGA ACTTAGGGCCGATCTTCGCTCTTATCAAGGATTGGTACGTGCTTATCTAGCGCTCTCTAA ATGCAAAGATGCATTATTCACTGCACGTGAAGCAATGAAGGTTATGCATCAGTCTGCAAA AGCTCTCAAATTAGTTGGTGATGTGCATGCTATCAGTTCCAGTGGGAGAGAGAAGGCTAG GAAGTTCTATGAATCCGCCATTCGTCTTGAACCTGGATTTCTGGGAGCTGCATTGGCTTT GGCTGATCTGCATGTCGCTGAAGGACGAAATAAGGATGCAGTATTGCTGCTTGAAAGATA TCTAAGACAGTGGACAGATGATTCTCTACACATCAAGTTGGCTCAAGTTTTTGCAGCAAC GAATATGCTTTCTGATGCACTTTCCCACTACCAATCTGCTCTAAGGATAAACCCACATAA TGAGGCCGCAAAGAAAGGATTGGAACGCTTAGAGAAGCAAATGAAGGGAGTAGACCCGGA CGCGCCTGAAGAGGACGAAGAGAACGAAGCTGACGATGTCGACGGTGATCAAGACGACGC TGAACTACTGTAGAAAAAACCTGATCAACTCACATCAACCCAAGGCACCACCTCTTACCA AGCGTCAACTGCGAAAGAGGACCAAATCTGCAGCCGCTGCCACAGCAGGAGAGCCCCTCA ATTGCCATATATCAACTAGCAACTTGGAAGGCACGGCAACTGGAAGACGAGTGACGACGA CGGGTGCCTCTCCCTTACCGCGATGATCAGATACGTACGGTATGTATAAGTACGGCGATT CTACCACGCACAGTGGTACATACGTATACGTACACTAGCCAGCAGCTGGAGCTGGCTGGC TTCTCTACTACACTGGCATGCAGCTTGGTGTGGCAGGCTACACCCAGAGCGCGCCGGCGT CGCGGAGGAGCGGGACAAGGCCGCCGGCGACGTGGAGCGACATGACCCGGTCGGTGGAGC CGACGAGCCTGCCGCCGATGAACACTGTCGGCACCACGACGCCGCGGCCGCGGCCACCGC CGTTGGCGGCGGTGCCGGCGAGCAACATCCCGGCGAGCGCGTTCTCCATGTCGGCGCCGG CGGGCTCCTCGTCGAGCTCCACCACGCGGGCGTCGACGCCGAGCTCCCGGAGCAGGCGCG TCACGGCGTGGGACATGCCGCACGAGCTCTTGCTGAACACCACCACCGCCTTCTGCGACG CCAGCCTTGTCACCCTGTCCATCTCTATATATGCAAATGTCTATGTGCCTAGTGTCTTCT TCCCCGTCTCCGGCGACTACGACCTGGCCGCGGAATGCGCCGGGATCTTTGGCTGGATGG ATGTCACCGGCGGTGATCGCCCGATCGATCGAGGTTGTGTCACTTGTTAGTGATGCTGAT CTGCTGGTTGTGCTTGCATTTGAGAGGTTAGGGAAGGCATGCTTATATAGTGTTCTTATG CATGTTGGCGAAATGGTATATCGCGCGTGCAAATGCTGGGTGAAGATGGAGTTAAAGAAT CTTCAGAGGAATAATTAAAGGCGATCGATCGATTTATGCATTTCTGCGGGTTTTTTTTTT CTTCTCTCTCTCTCTTTTGGTTTTGGGATAATGCTTGGCACCATTTCTGGGTTGTGAAAA AGATGAGCTGATAGATAGGTTGGTAAGGAATATGGAACATTTTGGCGGCGACGG