Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0149800-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2845696:2851659:1 gene:Os05g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TONNEAU2, TONNEAU 2 description:EF-Hand type domain containing protein. (Os05t0149800-01);Similar to Discordia 1. (Os05t0149800-02)
Sequence	ATGAGCACCGCCTCCGGCGACGGCGGGGACGGCGGCGGCGGCGGGGATGGCGCCTCGTCG GCCGCGGGGGGCGGCGGGAGGCGGATCCCGCCCGCCTCGTCCATGCCGTGGGTCCGCAAC CTCCGCCGCTTCGTCGGCACGGGCGCCGGCCTCGGATCCGAGGCCTTGATGGAACTGGAA ACAAAAAGGATACTGCTTGAGATTTTCAAGGAGCGCCAACGGAAGAGTATGGAAGCTGGT GCCATTCCAAGTTTTTATAAGAAGAAACCTGAAGATGGATCCATTAGCAATAGAGTTCAG AAATTGGCAAAGTACAGGTTTCTAAAGAAACAATCTGAACTTCTGCTTAATGCTGATGAT CTTGATGCCATGTGGGTTTGTCTCAGAGAAAATTGCGTTATTGATGATGCTACAGGTGCT GAAAAGATGAATTATGAAGACTTTTGCCATATTGCAACAGTATGCACAGAGCAGATCGGC CAGAAGTGCAAGCGTTTCTTCAGCCCTTCAAATTTTATGAAGTTTGAGAAGGATGATTCT GGGAGAATTGCAATCCTACCATTTTATCTTTATGTTATGCGGACAGTATCTCTCACACAA GCGAGAATTGATATGAGTGAGCTTGATGAGGATTCTGATGGTTTCCTTCAACCTCATGAA ATGGAAGCATACATAAGAGGGCTTATCCCCAATTTGGCACAACTGCGTGATATGCCATCA GCATTTGTTCAAATGTACTGCCGCATAGCTGCACGCAAGTTCTTTTTCTTCTGCGATCCA CACAGACGAGGGAAAGCATGCATAAAGAAAGTATTGCTGAGCAATTGTCTTCAGGAACTT ATGGAACTACATCAGGAGAGTGAGGAAGAGGTTACTGATACTGAGCAGGCTGAAAATTGG TTTTCCCTGACGTCAGCTCAGCGCATTTGTGATATGTTTCTTGCACTTGACAAAGATACA AATGGAACATTGAGCAAACAGGAGCTCAAGGAATATGCAGATGGCACATTGACTGATATC TTCATTGAAAGAGTTTTTGATGAGCATGTACGCCGGAGCAAAGTTGGAGGTGGCAACAGT CGTGAAATGGACTTTGAAAGCTTTCTTGACTTTGTTTTGGCTCTAGAAAACAAAGATACT CCTGAAGGATTGACATACCTATTTAGATGCCTTGATCTTAATGGAAGGGGATTCCTGACA ACTGCTGATATCCATACATTATTTAGGGATGTACACCAGAAATGGATTGAAGGCGGAAAC TATGAACTTTGCATCGAAGACGTGAGGGATGAAATCTGGGACATGGTAAAGCCGGCAGAT CCTCTCAGGATCGCACTAACAGATCTTCTATCTTGCAAGCAAGGCGGGACTATTGCCAGC ATGCTTATAGATGTGCGCGGCTTCTGGGCCCACGACAACAGAGAGAACCTCCTCCAGGAA GAGGAAGAGCAAGTGGAAGAGGCCTGA

Peptide Sequence

PEP ID	Os05t0149800-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2845696:2851659:1 gene:Os05g0149800 transcript:Os05t0149800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TONNEAU2, TONNEAU 2 description:EF-Hand type domain containing protein. (Os05t0149800-01);Similar to Discordia 1. (Os05t0149800-02)
Sequence	MSTASGDGGDGGGGGDGASSAAGGGGRRIPPASSMPWVRNLRRFVGTGAGLGSEALMELE TKRILLEIFKERQRKSMEAGAIPSFYKKKPEDGSISNRVQKLAKYRFLKKQSELLLNADD LDAMWVCLRENCVIDDATGAEKMNYEDFCHIATVCTEQIGQKCKRFFSPSNFMKFEKDDS GRIAILPFYLYVMRTVSLTQARIDMSELDEDSDGFLQPHEMEAYIRGLIPNLAQLRDMPS AFVQMYCRIAARKFFFFCDPHRRGKACIKKVLLSNCLQELMELHQESEEEVTDTEQAENW FSLTSAQRICDMFLALDKDTNGTLSKQELKEYADGTLTDIFIERVFDEHVRRSKVGGGNS REMDFESFLDFVLALENKDTPEGLTYLFRCLDLNGRGFLTTADIHTLFRDVHQKWIEGGN YELCIEDVRDEIWDMVKPADPLRIALTDLLSCKQGGTIASMLIDVRGFWAHDNRENLLQE EEEQVEEA

Transcript Sequence

Transcript ID	Os05t0149800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2845696:2851659:1 gene:Os05g0149800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TONNEAU2, TONNEAU 2 description:EF-Hand type domain containing protein. (Os05t0149800-01);Similar to Discordia 1. (Os05t0149800-02)
Sequence	GCGTTCGAGCCATCGAGCCGACAAGGCGACAACAGCCACAACGCCTCACTCCCCCCACCC CACGCGCTCCGACGAGCTCCGATCCGCCGCCCACCTCGCCGCCCGCCGGCGATGAGCACC GCCTCCGGCGACGGCGGGGACGGCGGCGGCGGCGGGGATGGCGCCTCGTCGGCCGCGGGG GGCGGCGGGAGGCGGATCCCGCCCGCCTCGTCCATGCCGTGGGTCCGCAACCTCCGCCGC TTCGTCGGCACGGGCGCCGGCCTCGGATCCGAGGCCTTGATGGAACTGGAAACAAAAAGG ATACTGCTTGAGATTTTCAAGGAGCGCCAACGGAAGAGTATGGAAGCTGGTGCCATTCCA AGTTTTTATAAGAAGAAACCTGAAGATGGATCCATTAGCAATAGAGTTCAGAAATTGGCA AAGTACAGGTTTCTAAAGAAACAATCTGAACTTCTGCTTAATGCTGATGATCTTGATGCC ATGTGGGTTTGTCTCAGAGAAAATTGCGTTATTGATGATGCTACAGGTGCTGAAAAGATG AATTATGAAGACTTTTGCCATATTGCAACAGTATGCACAGAGCAGATCGGCCAGAAGTGC AAGCGTTTCTTCAGCCCTTCAAATTTTATGAAGTTTGAGAAGGATGATTCTGGGAGAATT GCAATCCTACCATTTTATCTTTATGTTATGCGGACAGTATCTCTCACACAAGCGAGAATT GATATGAGTGAGCTTGATGAGGATTCTGATGGTTTCCTTCAACCTCATGAAATGGAAGCA TACATAAGAGGGCTTATCCCCAATTTGGCACAACTGCGTGATATGCCATCAGCATTTGTT CAAATGTACTGCCGCATAGCTGCACGCAAGTTCTTTTTCTTCTGCGATCCACACAGACGA GGGAAAGCATGCATAAAGAAAGTATTGCTGAGCAATTGTCTTCAGGAACTTATGGAACTA CATCAGGAGAGTGAGGAAGAGGTTACTGATACTGAGCAGGCTGAAAATTGGTTTTCCCTG ACGTCAGCTCAGCGCATTTGTGATATGTTTCTTGCACTTGACAAAGATACAAATGGAACA TTGAGCAAACAGGAGCTCAAGGAATATGCAGATGGCACATTGACTGATATCTTCATTGAA AGAGTTTTTGATGAGCATGTACGCCGGAGCAAAGTTGGAGGTGGCAACAGTCGTGAAATG GACTTTGAAAGCTTTCTTGACTTTGTTTTGGCTCTAGAAAACAAAGATACTCCTGAAGGA TTGACATACCTATTTAGATGCCTTGATCTTAATGGAAGGGGATTCCTGACAACTGCTGAT ATCCATACATTATTTAGGGATGTACACCAGAAATGGATTGAAGGCGGAAACTATGAACTT TGCATCGAAGACGTGAGGGATGAAATCTGGGACATGGTAAAGCCGGCAGATCCTCTCAGG ATCGCACTAACAGATCTTCTATCTTGCAAGCAAGGCGGGACTATTGCCAGCATGCTTATA GATGTGCGCGGCTTCTGGGCCCACGACAACAGAGAGAACCTCCTCCAGGAAGAGGAAGAG CAAGTGGAAGAGGCCTGAGTTCTCCAGCTGCCGTGCAACCAACCTGGTAAACTCTCAACC GCAAGGCACTGGCAATTGCTGGTATCTCGCAACCGCAAGGCACGGGCAATTGCTTGTACC ACTGTATGTGTGCCATTGTAGCTTACATAGTGTATTAGAATCAAGTTCAACCTGTTCGCT GGGAGACTTGTTGTAACCTGTAAGTGTTCCATTTGTGTAACCGGAGTGAAATCTGACATA TTTTGAGTTGAACATGGTTTTGTCGTGTCGACCAGATGTATTACCGCAGGGCTTGGTTGG ATGCAGAAAGGAAAGCCTCAGCCTGTGGAATTTGTACGTCTATGCGACACCACGCATGTA ATTCGGTTTGCAACTGCAAGTCTATATACGCAAAAATACATTGTATGCCCTTTGATGCAG TGGTTATTTGTGCCCTTCTCCGTGCCAATCACTAGTTTGCTTTC