Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0149400-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:2825324:2826912:1 gene:Os05g0149400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 5 description:ACC oxidase, Ethylene biosynthesis (Os05t0149400-01)
Sequence

ATGGTTGTTCCGGTGATCGACTTCTCCAAGCTCGACGGCACCGCCGCAGAGAGGGCTGAG
ACGATGGCGCAGATCGACAATGGCTGCGAGGAGTGGGGATTCTTCCAGCTGGTGAACCAT
GGCGTCCCGAAGGAGCTTCTTGATCGGGTGAAGAAGGTGTGCTTGGAGAGCTACCGACTC
CGGGAGGCGGCGTTCATGGAGTCGGAGCCGGTGAGGACGCTGGAGGGGCTCATGGCGGCG
GAGCGGCGCGGCGAGGCGGCGGCGCCGGTGGACGACATGGACTGGGAGGACATCTTCTAC
CTCCACGACGACAACCAGTGGCCGTCGAACCCGCCGGAGTTCAAGGAGACGATGCGCGAG
TACCGCGCGGCGCTGCGGGGGCTCGCCGAGAGGGTGATGGAGGCCATGGACGAGAACCTC
GGCCTCGACAAGGGGCGCATGAGGCGCGCCTTCACCGGCGACGGCCGCCACGCGCCGTTC
TTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCCGACCTCATCACCGGCCTC
CGCGCCCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGACGACCGCGTCGGCGGC
CTCCAGGTGCTCAGGGGCGGCGAGTGGGTCGACGTGCAGCCGCTCGCCGACGCCATCGTC
GTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGCAC
CGCGTCCTCCCCATGCGCGACGGAAACCGGCGCTCCGTCGCGTCGTTCTACAACCCGGCG
TTCGAGGCCACCATCTCGCCGGCGGTGGGCGCCGGCGGCGAGTACCCGGAGTACGTGTTC
GGCGAGTACATGGATGTGTACGCCAAGCAGAAGTTCGATGCGAAGGAGCCACGCTTCGAG
GCCGTCAAGGCGCCAAAATCTGCTTAA

Peptide Sequence

PEP ID

Os05t0149400-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:2825324:2826912:1 gene:Os05g0149400 transcript:Os05t0149400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 5 description:ACC oxidase, Ethylene biosynthesis (Os05t0149400-01)
Sequence

MVVPVIDFSKLDGTAAERAETMAQIDNGCEEWGFFQLVNHGVPKELLDRVKKVCLESYRL
REAAFMESEPVRTLEGLMAAERRGEAAAPVDDMDWEDIFYLHDDNQWPSNPPEFKETMRE
YRAALRGLAERVMEAMDENLGLDKGRMRRAFTGDGRHAPFFGTKVSHYPPCPRPDLITGL
RAHTDAGGVILLFQDDRVGGLQVLRGGEWVDVQPLADAIVVNTGDQVEVLSNGRYRSAWH
RVLPMRDGNRRSVASFYNPAFEATISPAVGAGGEYPEYVFGEYMDVYAKQKFDAKEPRFE
AVKAPKSA

Transcript Sequence

Transcript ID

Os05t0149400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:2825324:2826912:1 gene:Os05g0149400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AMINOCYCLOPROPANE-1-CARBOXYLIC ACID OXIDASE 5 description:ACC oxidase, Ethylene biosynthesis (Os05t0149400-01)
Sequence

ATCAACTGCAAGCTTACATCACACTAGCTAATTAGCTACTTACTCTTCTTCTTGCTAGCT
TGCTAGCTTCTGCATTTAGACATTGCAAAATCTGAAAAAACTTGAGAAATTAACTAAACA
AAATGGTTGTTCCGGTGATCGACTTCTCCAAGCTCGACGGCACCGCCGCAGAGAGGGCTG
AGACGATGGCGCAGATCGACAATGGCTGCGAGGAGTGGGGATTCTTCCAGCTGGTGAACC
ATGGCGTCCCGAAGGAGCTTCTTGATCGGGTGAAGAAGGTGTGCTTGGAGAGCTACCGAC
TCCGGGAGGCGGCGTTCATGGAGTCGGAGCCGGTGAGGACGCTGGAGGGGCTCATGGCGG
CGGAGCGGCGCGGCGAGGCGGCGGCGCCGGTGGACGACATGGACTGGGAGGACATCTTCT
ACCTCCACGACGACAACCAGTGGCCGTCGAACCCGCCGGAGTTCAAGGAGACGATGCGCG
AGTACCGCGCGGCGCTGCGGGGGCTCGCCGAGAGGGTGATGGAGGCCATGGACGAGAACC
TCGGCCTCGACAAGGGGCGCATGAGGCGCGCCTTCACCGGCGACGGCCGCCACGCGCCGT
TCTTCGGCACCAAGGTCAGCCACTACCCGCCGTGCCCGCGCCCCGACCTCATCACCGGCC
TCCGCGCCCACACCGACGCCGGCGGCGTCATCCTGCTGTTCCAGGACGACCGCGTCGGCG
GCCTCCAGGTGCTCAGGGGCGGCGAGTGGGTCGACGTGCAGCCGCTCGCCGACGCCATCG
TCGTCAACACCGGCGACCAGGTGGAGGTGCTCAGCAACGGCCGCTACCGCAGCGCGTGGC
ACCGCGTCCTCCCCATGCGCGACGGAAACCGGCGCTCCGTCGCGTCGTTCTACAACCCGG
CGTTCGAGGCCACCATCTCGCCGGCGGTGGGCGCCGGCGGCGAGTACCCGGAGTACGTGT
TCGGCGAGTACATGGATGTGTACGCCAAGCAGAAGTTCGATGCGAAGGAGCCACGCTTCG
AGGCCGTCAAGGCGCCAAAATCTGCTTAAAGTTAAAAATAGACTTTTATTTGTGAATTAA
TTAATTGATTAGTTGCATAAACTATACATAACCGCTTTTGCTATTCAAGATAAAAAAATA
GGTGACCTTACAAAATTTAAGTGGTTATTATTGTCATGAGAATACAACTATTGTTATGTT
ACAGTATATAGTTTGGTATTTTAGTGTGTCACGGTTTGTCAGTAGGAATATATAATAATG
TAATAGATCGTGTTGTTATATATACATGAATAAACTATATAGATTTTTTTAATT