Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0147500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2725695:2733658:1 gene:Os05g0147500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 6, DEG PROTEASE 6 description:Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-01);Serine endopeptidase DegP2 domain containing protein. (Os05t0147500-02);Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-03)
Sequence	ATGGCGGGCGTCGCCGCCCTCTTCGCCTCCCCGGCCTTCCCCTTCCCATCCACCTCCTCC GTCTCCTCCTGCTCCTGCCGCTTCCGCCCCGCCGTCGCCCGCGCCCCGCGCCACCAGCCT CCCGGCCGCCGCGTGACCCGGCGCTTCGACGAGGTGGAGGGGGTGTCGAAGAGGCGGCGG GGCATTGGCGGCGGCGGCGGAGGGGGCTCGCAGGCGTCGTCGTCGTCGTCGCGTAAGGAC AGAGGGCTCGCCGTTGACTTCAAGGAGTCGCAGGTCTCAGATTTCGAGGACCTTGAAGAG GACAAATTCCTTAATGCTGTAGTTAAGGTCTATTGCACTCATATTGCACCTGATTATGGG CTTCCTTGGCAGAAGCAAAGGCAACATGCAAGCACAGGGAGTGCCTTTATGATTGGTGAT GGCAAACTATTGACAAATGCACATTGTGTTGAGCATGACACCCAGGTCAAAGTAAAGAGA AGGGGAGATGACAAAAAATATATTGCCAAGGTTCTAGCAAGGGGTATTGAGTGTGACCTT GCATTGCTGTCTGTTGAGAATGAGGAATTCTGGCGAGGAACAGAGCCACTTCAACTGGGT CGCTTGCCGTGCCTTCAGGATTCAGTAACTGTTGTGGGATATCCTCTTGGTGGAGACACG ATATCTGTAACAAAAGGTGTTGTTTCACGCATCGAGGTCACTCCATATGCACATGGAACT TCAGATCTTCTTGGCATTCAAATCGATGCAGCAATAAATCCTGGAAACAGTGGTGGACCA GCCTTTAATGACCATGGGGAATGCATCGGTGTGGCATTTCAGGTGTTCAGGTCAGATGAA GCTGAAAATATTGGATATGTAATTCCAACTACAGTTGTATCCCATTTCTTGAACGACTAT CAGAAGAATGGAAAATATACAGGATTTCCTTGCCTGGGTGTTCTCCTTCAAAAATTGGAA AACCCTGCGTTGCGTGAAAGCTTAAAAGTACCTTCAAGTGAGGGTGTTCTTGTCCGCCGG GTTGAGCCTACTGCTCCTGCAAGCAAAGTTTTGCGGAAGGGAGATGTGATAACAAGTTTT GATGGCGTCGCGGTTGGATGTGAGGGAACTGTACCATTCCGCTCCACAGAGCGAATTGCT TTCCGCTACCTCACAAGCCAAAAGTATGCAGGTGATGTTGCCCAACTAGGTATCATTCGG GCAGGCAACACCATGAAAGTACAGACCGTTTTGCAGCCAAGAAAACATTTAGTGCCGTTC CATGTTGAAGGAGGGCAGCCTTCCTATCTGATAGTTGCTGGCCTTGTCTTCACACCTTTG ACAGAACCATTTATAGAGGAGGAGTGCGAAGAAACTCTAGGGTTGAAATTGCTGGCAAAG GCACGCTATTCTCTATCAACATTTGAAGGGGAGCAAATCGTTATTGTATCACAGGTTTTG GCACACGAGGTTAACATTGGCTATGAACACATGGGCAATCAACAAGTCATTAAGCTAAAT GGAACCGTGGTAAAGAATATTCACCATCTTGCCCACCTTGTTGACAACTGCAAAGACAAG TTCTTGACGTTCGAATTCGAAGACGACTTCCTAGTTGTTTTGGATCGGGAAGAAGCGACT ACCGCATCATCAGATATCCTAAAGGAACATGCAATTCCCTCTGTAAGGTCATCTGATCTA TCAGAGCCATATGTCGACACAGAGCAAGAAATCCAAAAACCAAACGATGATTTTGGTGAC AGCCCTGTCACAAACTATGAAATGGGAGTTGACTGTCTCCTCTGGGCATGA

Peptide Sequence

PEP ID	Os05t0147500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2725695:2733658:1 gene:Os05g0147500 transcript:Os05t0147500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 6, DEG PROTEASE 6 description:Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-01);Serine endopeptidase DegP2 domain containing protein. (Os05t0147500-02);Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-03)
Sequence	MAGVAALFASPAFPFPSTSSVSSCSCRFRPAVARAPRHQPPGRRVTRRFDEVEGVSKRRR GIGGGGGGGSQASSSSSRKDRGLAVDFKESQVSDFEDLEEDKFLNAVVKVYCTHIAPDYG LPWQKQRQHASTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDKKYIAKVLARGIECDL ALLSVENEEFWRGTEPLQLGRLPCLQDSVTVVGYPLGGDTISVTKGVVSRIEVTPYAHGT SDLLGIQIDAAINPGNSGGPAFNDHGECIGVAFQVFRSDEAENIGYVIPTTVVSHFLNDY QKNGKYTGFPCLGVLLQKLENPALRESLKVPSSEGVLVRRVEPTAPASKVLRKGDVITSF DGVAVGCEGTVPFRSTERIAFRYLTSQKYAGDVAQLGIIRAGNTMKVQTVLQPRKHLVPF HVEGGQPSYLIVAGLVFTPLTEPFIEEECEETLGLKLLAKARYSLSTFEGEQIVIVSQVL AHEVNIGYEHMGNQQVIKLNGTVVKNIHHLAHLVDNCKDKFLTFEFEDDFLVVLDREEAT TASSDILKEHAIPSVRSSDLSEPYVDTEQEIQKPNDDFGDSPVTNYEMGVDCLLWA

Transcript Sequence

Transcript ID	Os05t0147500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2725695:2733658:1 gene:Os05g0147500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Deg protease 6, DEG PROTEASE 6 description:Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-01);Serine endopeptidase DegP2 domain containing protein. (Os05t0147500-02);Similar to DEGP2 (DEGP PROTEASE 2); serine-type peptidase/ trypsin. (Os05t0147500-03)
Sequence	GTCTTCACTCTCCCAACTCTCTCCCCCCAATCAGAAAGAGGATAAGGAGCTCCGCCTCGG GGAGGGAGGGAAACCCGAATCAAACTCGCGCGCCGCGAAGCAGCAGCCGCAGCAATGGCG GGCGTCGCCGCCCTCTTCGCCTCCCCGGCCTTCCCCTTCCCATCCACCTCCTCCGTCTCC TCCTGCTCCTGCCGCTTCCGCCCCGCCGTCGCCCGCGCCCCGCGCCACCAGCCTCCCGGC CGCCGCGTGACCCGGCGCTTCGACGAGGTGGAGGGGGTGTCGAAGAGGCGGCGGGGCATT GGCGGCGGCGGCGGAGGGGGCTCGCAGGCGTCGTCGTCGTCGTCGCGTAAGGACAGAGGG CTCGCCGTTGACTTCAAGGAGTCGCAGGTCTCAGATTTCGAGGACCTTGAAGAGGACAAA TTCCTTAATGCTGTAGTTAAGGTCTATTGCACTCATATTGCACCTGATTATGGGCTTCCT TGGCAGAAGCAAAGGCAACATGCAAGCACAGGGAGTGCCTTTATGATTGGTGATGGCAAA CTATTGACAAATGCACATTGTGTTGAGCATGACACCCAGGTCAAAGTAAAGAGAAGGGGA GATGACAAAAAATATATTGCCAAGGTTCTAGCAAGGGGTATTGAGTGTGACCTTGCATTG CTGTCTGTTGAGAATGAGGAATTCTGGCGAGGAACAGAGCCACTTCAACTGGGTCGCTTG CCGTGCCTTCAGGATTCAGTAACTGTTGTGGGATATCCTCTTGGTGGAGACACGATATCT GTAACAAAAGGTGTTGTTTCACGCATCGAGGTCACTCCATATGCACATGGAACTTCAGAT CTTCTTGGCATTCAAATCGATGCAGCAATAAATCCTGGAAACAGTGGTGGACCAGCCTTT AATGACCATGGGGAATGCATCGGTGTGGCATTTCAGGTGTTCAGGTCAGATGAAGCTGAA AATATTGGATATGTAATTCCAACTACAGTTGTATCCCATTTCTTGAACGACTATCAGAAG AATGGAAAATATACAGGATTTCCTTGCCTGGGTGTTCTCCTTCAAAAATTGGAAAACCCT GCGTTGCGTGAAAGCTTAAAAGTACCTTCAAGTGAGGGTGTTCTTGTCCGCCGGGTTGAG CCTACTGCTCCTGCAAGCAAAGTTTTGCGGAAGGGAGATGTGATAACAAGTTTTGATGGC GTCGCGGTTGGATGTGAGGGAACTGTACCATTCCGCTCCACAGAGCGAATTGCTTTCCGC TACCTCACAAGCCAAAAGTATGCAGGTGATGTTGCCCAACTAGGTATCATTCGGGCAGGC AACACCATGAAAGTACAGACCGTTTTGCAGCCAAGAAAACATTTAGTGCCGTTCCATGTT GAAGGAGGGCAGCCTTCCTATCTGATAGTTGCTGGCCTTGTCTTCACACCTTTGACAGAA CCATTTATAGAGGAGGAGTGCGAAGAAACTCTAGGGTTGAAATTGCTGGCAAAGGCACGC TATTCTCTATCAACATTTGAAGGGGAGCAAATCGTTATTGTATCACAGGTTTTGGCACAC GAGGTTAACATTGGCTATGAACACATGGGCAATCAACAAGTCATTAAGCTAAATGGAACC GTGGTAAAGAATATTCACCATCTTGCCCACCTTGTTGACAACTGCAAAGACAAGTTCTTG ACGTTCGAATTCGAAGACGACTTCCTAGTTGTTTTGGATCGGGAAGAAGCGACTACCGCA TCATCAGATATCCTAAAGGAACATGCAATTCCCTCTGTAAGGTCATCTGATCTATCAGAG CCATATGTCGACACAGAGCAAGAAATCCAAAAACCAAACGATGATTTTGGTGACAGCCCT GTCACAAACTATGAAATGGGAGTTGACTGTCTCCTCTGGGCATGAACAGCCAAGGATGGA ATTTGAATTTCAGTTCAAACAGTGACAATGCCGGTGAATTTCATGCATCTGGATGGCAGG AAAGAGCATTTCCCCACCATGTTGAAATCCACTCCATAGAGGCGAAGCCGGAGTCATGTT TGTTAGTGTAGGAAGTTCAGAGTTATGTTGTACCTTAGAAAACCACACAAATGCTTGATT CATCATCAATTTTTTTAGGGGATGGGACTATGGGACTGTGGGAGATTGGGGGAGGGCTGT AGAATTTGGCAGGGTGTAATCCTGTAATTTTTTGGGCATGCAATAAATCGTCCAGAAATT TTGTTGCTTT