Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0146100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2639014:2649055:-1 gene:Os05g0146100 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os05t0146100-01)
Sequence	ATGGCGCCTGGCGCAGCGGGAGCGGAGGAGGCTTCGGGGTCCGTGAAGACCCGGTCGAGC GCAAGGCGACGCCGCAGTGTCAACCGGGACGGCGGCAGCGGGGTGGTGGCCTCGCTCGCA TCCCAATCGGCGGCGCGCGCGGAGCGATCCGAGAGGCGATCAGCTAAAAGGTCAGCAACT CTGGCCGATCAGAGCAGCGAGGGTGAAAGGGCAGCGAAGAAGATGGATTTGGGGGTGCAT GAGGAGGAGGAGGGGGTGAAGGTGGCGCCGCCTTCAGCGTCTGCGTCAGTAGCGGAGGAG CAACAAGGGGGAAAGGGCGGCGAAGACGATGGATTTGGGGGTTCAGCAGGAGGAGGAGAA GGTGGCGCACTGGCGCTGCCTTCAGCGTCAGGAGTGGAGGAGGGGATTCCAGTGGAGGAC GAGGCCTCTTCTTGCTGCAGTTCTCCTCTCCGTAAGCCATACATACCCCGTGTTGTAATT GGACACAATGCCATGGGTAGAGAGATCTATAAGCCTATCGGAGGTGAAGACTTCAGGGCA CTTGATCCGTGGGAAGCCAAATACCAGGCAAAAAGAGATTGTCAAATGAAACTGCCCACT TTACTCCCATGCGTACCTGACACATGCCTTACTGATCGGAACCTCCTCCACATTCGTGAA TCATCGACTAAGACTGTTCTTCATGCTGCAAAGTTTGTTGTGGGTCTTTCGTCTACTATA GATGGCAAGTCATTATCTAAGAGTTCTGGTTTCATGATCGATTGGGATGAGAAGAGCAAA ACAGGCACTATTTTGACATCAGCCCTTCTTATTTGCAAACAGTCCCCTTCTTTAGATGAT TGGAAAAGTGCAAACCAGTATGCTTCTAATGCTAAGGTTGCAGTTCGCTTTGTGGATGGT ACCACTGTGGAGGGTCATTTTCTATATTGTCAGGAGCATTACAACCTTGCTTTCTACAAG ATTGTAGTGGACAGATCCATCCATTTACCCTCCTTTAATGAAGGAGTGAAATGGGCTGAA GAGGTCTTTATCCTGGGAAGAGATGAAAATTCGTATCTGAGAACAAGCTATGGTAGGGTT CAGTATTTGAATCCACATATGAATGAACGCCGTCACTATGTATACATTGATGGTTTCAGT GCACCTCCTGAGTATTACAACGGGGGACCAGTCATTGACTTAAGGGGAGATGTTGTGGGC ATGTCTATCCGCAGTACAAGAGGGTCTTTTATTCCTTCTAACATCATCCTCAAGTGCTTG CAGATGTGGAGGAAGTTCCAATGCATTCCTCGACCACATCTTCAAATGAAGTTTTGGGGC ATGAAATTTCTTAACCCTGCTCATCTTGAGGTGATATCTTGCAAGTGCAACATTGATGAG GGCCTTATCGTTAAAGAGGTGTCAGAAGGTTCTATTGCTGAGAAACTTGGGGTTAGAGTT GGTGATGTCATTAAATTCTTCAACGGAAAACATATCTCTTCTACTGTTGAGTTGGAACTA CTGTTGCTGCAAATATCAGAGGATCATTTTTACAATGGAAATGGCCTTGATTCCAAAATA GATATTGTGATTGGAGTATTCCACACACGCAGTGGTGTTTGGAGAAGTCGGAAGTTGACA GTACATGTATCCGACAAAGGAGAAGTTGTTATAAGAGGTGAATTTCCTGTCACTAGAGAG ACAATTTATGCAAGATGTCCACTTGACCAAGCAGATTCAGATCCAGACAATTCTCAAATC TCTCTCACAGATCGAACATCGTCATCGTCATCGTCATCGTCATCATCATCAGATTCAGGT TCTCTCCATGCCCCTACTTCTACTGAAGGAAGGACACCCACCTGA

Peptide Sequence

PEP ID	Os05t0146100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2639014:2649055:-1 gene:Os05g0146100 transcript:Os05t0146100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os05t0146100-01)
Sequence	MAPGAAGAEEASGSVKTRSSARRRRSVNRDGGSGVVASLASQSAARAERSERRSAKRSAT LADQSSEGERAAKKMDLGVHEEEEGVKVAPPSASASVAEEQQGGKGGEDDGFGGSAGGGE GGALALPSASGVEEGIPVEDEASSCCSSPLRKPYIPRVVIGHNAMGREIYKPIGGEDFRA LDPWEAKYQAKRDCQMKLPTLLPCVPDTCLTDRNLLHIRESSTKTVLHAAKFVVGLSSTI DGKSLSKSSGFMIDWDEKSKTGTILTSALLICKQSPSLDDWKSANQYASNAKVAVRFVDG TTVEGHFLYCQEHYNLAFYKIVVDRSIHLPSFNEGVKWAEEVFILGRDENSYLRTSYGRV QYLNPHMNERRHYVYIDGFSAPPEYYNGGPVIDLRGDVVGMSIRSTRGSFIPSNIILKCL QMWRKFQCIPRPHLQMKFWGMKFLNPAHLEVISCKCNIDEGLIVKEVSEGSIAEKLGVRV GDVIKFFNGKHISSTVELELLLLQISEDHFYNGNGLDSKIDIVIGVFHTRSGVWRSRKLT VHVSDKGEVVIRGEFPVTRETIYARCPLDQADSDPDNSQISLTDRTSSSSSSSSSSSDSG SLHAPTSTEGRTPT

Transcript Sequence

Transcript ID	Os05t0146100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2639014:2649055:-1 gene:Os05g0146100 gene_biotype:protein_coding transcript_biotype:protein_coding description:PDZ/DHR/GLGF domain containing protein. (Os05t0146100-01)
Sequence	GAAATCCCCAACTCCAAAAATTCCTCGAGTAGAAGTGCGAGTTTCTCCGGCGATCGCAAG CAAGAAACCCTAGGCTTCCCTCCGGCATGCCATGGCGCCTGGCGCAGCGGGAGCGGAGGA GGCTTCGGGGTCCGTGAAGACCCGGTCGAGCGCAAGGCGACGCCGCAGTGTCAACCGGGA CGGCGGCAGCGGGGTGGTGGCCTCGCTCGCATCCCAATCGGCGGCGCGCGCGGAGCGATC CGAGAGGCGATCAGCTAAAAGGTCAGCAACTCTGGCCGATCAGAGCAGCGAGGGTGAAAG GGCAGCGAAGAAGATGGATTTGGGGGTGCATGAGGAGGAGGAGGGGGTGAAGGTGGCGCC GCCTTCAGCGTCTGCGTCAGTAGCGGAGGAGCAACAAGGGGGAAAGGGCGGCGAAGACGA TGGATTTGGGGGTTCAGCAGGAGGAGGAGAAGGTGGCGCACTGGCGCTGCCTTCAGCGTC AGGAGTGGAGGAGGGGATTCCAGTGGAGGACGAGGCCTCTTCTTGCTGCAGTTCTCCTCT CCGTAAGCCATACATACCCCGTGTTGTAATTGGACACAATGCCATGGGTAGAGAGATCTA TAAGCCTATCGGAGGTGAAGACTTCAGGGCACTTGATCCGTGGGAAGCCAAATACCAGGC AAAAAGAGATTGTCAAATGAAACTGCCCACTTTACTCCCATGCGTACCTGACACATGCCT TACTGATCGGAACCTCCTCCACATTCGTGAATCATCGACTAAGACTGTTCTTCATGCTGC AAAGTTTGTTGTGGGTCTTTCGTCTACTATAGATGGCAAGTCATTATCTAAGAGTTCTGG TTTCATGATCGATTGGGATGAGAAGAGCAAAACAGGCACTATTTTGACATCAGCCCTTCT TATTTGCAAACAGTCCCCTTCTTTAGATGATTGGAAAAGTGCAAACCAGTATGCTTCTAA TGCTAAGGTTGCAGTTCGCTTTGTGGATGGTACCACTGTGGAGGGTCATTTTCTATATTG TCAGGAGCATTACAACCTTGCTTTCTACAAGATTGTAGTGGACAGATCCATCCATTTACC CTCCTTTAATGAAGGAGTGAAATGGGCTGAAGAGGTCTTTATCCTGGGAAGAGATGAAAA TTCGTATCTGAGAACAAGCTATGGTAGGGTTCAGTATTTGAATCCACATATGAATGAACG CCGTCACTATGTATACATTGATGGTTTCAGTGCACCTCCTGAGTATTACAACGGGGGACC AGTCATTGACTTAAGGGGAGATGTTGTGGGCATGTCTATCCGCAGTACAAGAGGGTCTTT TATTCCTTCTAACATCATCCTCAAGTGCTTGCAGATGTGGAGGAAGTTCCAATGCATTCC TCGACCACATCTTCAAATGAAGTTTTGGGGCATGAAATTTCTTAACCCTGCTCATCTTGA GGTGATATCTTGCAAGTGCAACATTGATGAGGGCCTTATCGTTAAAGAGGTGTCAGAAGG TTCTATTGCTGAGAAACTTGGGGTTAGAGTTGGTGATGTCATTAAATTCTTCAACGGAAA ACATATCTCTTCTACTGTTGAGTTGGAACTACTGTTGCTGCAAATATCAGAGGATCATTT TTACAATGGAAATGGCCTTGATTCCAAAATAGATATTGTGATTGGAGTATTCCACACACG CAGTGGTGTTTGGAGAAGTCGGAAGTTGACAGTACATGTATCCGACAAAGGAGAAGTTGT TATAAGAGGTGAATTTCCTGTCACTAGAGAGACAATTTATGCAAGATGTCCACTTGACCA AGCAGATTCAGATCCAGACAATTCTCAAATCTCTCTCACAGATCGAACATCGTCATCGTC ATCGTCATCGTCATCATCATCAGATTCAGGTTCTCTCCATGCCCCTACTTCTACTGAAGG AAGGACACCCACCTGATCCACCATAATCTGATCCAAGATTTTAATAACGTGTACATAGAT AGTCTCATCAAACACTACTGGCCATCTCCCACTTATGGTATTAATCAACGTGTACATGGA TAGACTCATTGTACGCTGCTGGTCATCTTTCCATCTCCCACTTATGGTATTAGTCAACGT GTAAATGGATAGACTCATTGTACGCTGCTGGCCATCTTTGTTCTGTCTTCCATTTTCTTG GAGTGCGTCTTTTCTTTTATCCTTTTTGGGATTCCTTAACCATATAGATATAACTATCTG TGAACATGGAGATGATGTCCATGAGCATGTTCTAGCTTTTCATTATGTCC