Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0145400-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2612817:2617247:-1 gene:Os05g0145400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 3, VERNALIZATION INSENSITIVE 3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III-like fold domain containing protein. (Os05t0145400-01)
Sequence	ATGACCAAAGCTACTCCTGTTAAAGCAAGCAAGAACCTTCAATTGCAGAAACAATCTCCA ACTAACTTAAAAGAAACAAATGGCCATGTTTGTAAGAAGGAAGTGGTGAATGGCGAGTGT CCTGTCCGTGACGTGAAATGCATTAGCACTTGGATCTGTAAGAATTTGGCCTGTAAAGCT GTTGTAACATCTGAAGATTCCTTCTGCAAGAGGTGCTCATGTTGTATTTGCCATCAGTTT GATGACAATAAGGATCCTAGTCTATGGTTGGTTTGTGCATCTGAAAATGATGACAAGAAC TGCTGTGGGTCTTCTTGCCATATTGAGTGTGCGCTCCAACACAAGAGGGTTGGCTGCTTT AATCTTGGGAATATTATTCAACTTGATGGGAGTTATTCTTGCGCTTCATGTGGAAAGGTT TCCGGAATACTAGGTTATTGGAAAAGGCAATTGGTGATTGCCAAAGATGCACGCCGAGTA GATATGCTCTGCCACCGCATCTATTTGAGTTATCGGCTACTGGGGGGAACTACCCGCTTT AAAGAATTGCATGGTATTATTGAAGATGCAAAAGCAAAATTGGAAAGTGAAGTTGGTCCA CTGGATGGAATGTCGGCAAAGATGGCACGTGGTATTGTAAGCAGGTTGCCTGCTGGTAGT GATTTGCAGAAACTTTGCTCTCTAGCTATTGAAAGAGCTGATGAGTTGCTGAGTTCCCCA GACCTGCATCTTCAAGATTCCTTACCTGCTGCCTGTAGATTCAGATTTGTAGAGATAACA TCTTCTTCCATTGTTATTATTCTAAAAGAAACTCCATTACCATCCTCTGACACTATCAGG GGTTATAAACTATGGTACTGGAAGAGCAGAGAGGAGCCAAGCATGGAAGAGCCTGTAGTT TTGTCCAAAGATCAAAGAAAAGTACTTGTTTTTAACCTTGCCCCATGCACACAGTATTCC TTCAGAATTATATCATTCACAGATGATGGGATACTAGGCCATTCTGAATCTAAATGTTAT ACGGGGAGCAAGGAGTTATTGTTTAAACGTACCACACAGAATGTAGCGGGAGCAGATGCA CATACACATAGAAGAGAGAAGACACAGGCTTTTAAGTCGACTGGATTTAAGATCCGAGAT GTTGGGAAGATATTGCGGCAAGCTTGGACTGAGGAAGGCCGTTTTGAAGGGTTTTGTGAA GATATGCATGAAGCTTCATGTGACAGAAGTGTCACAGACGTGGAGCAAACAGAGAACAGT GAACAGGGTCAATTGTTATCTGGTGCGTGCCGCAAACTTCAGTTCAGCACATTTTCTGTT CCTGACCTAAACGTTGAGGCACCTGTCCCCATGGACATTTCCCCGGACAAGTGTTACAAT TCAAAGATTGTACCAGTAAGATCCAACGATAGTGGTGGCTCAGAGACCTGCGCGGTGGGC CGGAGTGCTGAAGCTGAACCACCTGCTGTTGAATCTCGGCCAGAGGGCTGTGAACAAGAT GGTGCTTCCACTATTTGCCGTGAGAAGCAGCTTGCAAGACCGAGGGAGTTGGATGAGGAC TTTGAGTACTGTGTGCAGAAGATCAGGATGCTGGAATGCAAGGGACACATAGATAATGAT TTCAGGATGAAGTTCTTGACCTGGTTTAGTCTAAGATCAACGGAGAATGACCGTAGAGTT GTAACTACATTCATCAAAACACTAATCAATGAGCCAAGTGGTCTGGCTGAGCAGCTTGTT GATTCCTTTGGAGAAGCCATAAACTGCAAGAGGCAACGAAATGGTTTCTGCAATGAGCTT TGGCATGATGACAAAGGACAATAA

Peptide Sequence

PEP ID	Os05t0145400-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2612817:2617247:-1 gene:Os05g0145400 transcript:Os05t0145400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 3, VERNALIZATION INSENSITIVE 3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III-like fold domain containing protein. (Os05t0145400-01)
Sequence	MTKATPVKASKNLQLQKQSPTNLKETNGHVCKKEVVNGECPVRDVKCISTWICKNLACKA VVTSEDSFCKRCSCCICHQFDDNKDPSLWLVCASENDDKNCCGSSCHIECALQHKRVGCF NLGNIIQLDGSYSCASCGKVSGILGYWKRQLVIAKDARRVDMLCHRIYLSYRLLGGTTRF KELHGIIEDAKAKLESEVGPLDGMSAKMARGIVSRLPAGSDLQKLCSLAIERADELLSSP DLHLQDSLPAACRFRFVEITSSSIVIILKETPLPSSDTIRGYKLWYWKSREEPSMEEPVV LSKDQRKVLVFNLAPCTQYSFRIISFTDDGILGHSESKCYTGSKELLFKRTTQNVAGADA HTHRREKTQAFKSTGFKIRDVGKILRQAWTEEGRFEGFCEDMHEASCDRSVTDVEQTENS EQGQLLSGACRKLQFSTFSVPDLNVEAPVPMDISPDKCYNSKIVPVRSNDSGGSETCAVG RSAEAEPPAVESRPEGCEQDGASTICREKQLARPRELDEDFEYCVQKIRMLECKGHIDND FRMKFLTWFSLRSTENDRRVVTTFIKTLINEPSGLAEQLVDSFGEAINCKRQRNGFCNEL WHDDKGQ

Transcript Sequence

Transcript ID	Os05t0145400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2612817:2617247:-1 gene:Os05g0145400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VIN3-LIKE 3, VERNALIZATION INSENSITIVE 3-LIKE 4, VERNALIZATION INSENSITIVE 3-LIKE 1 description:Fibronectin, type III-like fold domain containing protein. (Os05t0145400-01)
Sequence	CTCTCTCTCTCTCTCTCTTTTGCCTTCTCAATTCCCACCGTTGTTTCGCTCCTCCCACCC GCCGCCGCCGCCGCCTCCTCCTCCCTCCCCTTGACTCGCGACGACGACGGCGACGCGAGC TCGCCGGAGGGTCGCCGCCTCCCCTTCCCCTTCGCGGTAGCCGCGCGCGGCTTCCTCCTC CCGCGTCGCCGCCTCGCACATTGGGGATCTCCCGTTCCCCGTTCCCCCGCGCACCGCTGG AAGGCTATTTTGCCGCGGCCGCAAACCCTAGCTTCCGCCGCCGTGGTGAGGGGCGGTGGC GGGAAGGGGATCGAGCGGTGCGGAAGGTGTTATTGGACATTGATTATCTTTGGTGGATGA CGTCCTCGCAATAAAGTGGGTCAGTGTTTCGAAAGATTCTGCAAGATGTTCAGAGAGGGT TTAGAAACTATTACCCTAGAAGATTATTACTGATGCCAGTACGTGAACGGAAAAAGAAAA AGGGAAGGTGGCTTGCTTAACCGAAGGGAAGAAATGACCAAAGCTACTCCTGTTAAAGCA AGCAAGAACCTTCAATTGCAGAAACAATCTCCAACTAACTTAAAAGAAACAAATGGCCAT GTTTGTAAGAAGGAAGTGGTGAATGGCGAGTGTCCTGTCCGTGACGTGAAATGCATTAGC ACTTGGATCTGTAAGAATTTGGCCTGTAAAGCTGTTGTAACATCTGAAGATTCCTTCTGC AAGAGGTGCTCATGTTGTATTTGCCATCAGTTTGATGACAATAAGGATCCTAGTCTATGG TTGGTTTGTGCATCTGAAAATGATGACAAGAACTGCTGTGGGTCTTCTTGCCATATTGAG TGTGCGCTCCAACACAAGAGGGTTGGCTGCTTTAATCTTGGGAATATTATTCAACTTGAT GGGAGTTATTCTTGCGCTTCATGTGGAAAGGTTTCCGGAATACTAGGTTATTGGAAAAGG CAATTGGTGATTGCCAAAGATGCACGCCGAGTAGATATGCTCTGCCACCGCATCTATTTG AGTTATCGGCTACTGGGGGGAACTACCCGCTTTAAAGAATTGCATGGTATTATTGAAGAT GCAAAAGCAAAATTGGAAAGTGAAGTTGGTCCACTGGATGGAATGTCGGCAAAGATGGCA CGTGGTATTGTAAGCAGGTTGCCTGCTGGTAGTGATTTGCAGAAACTTTGCTCTCTAGCT ATTGAAAGAGCTGATGAGTTGCTGAGTTCCCCAGACCTGCATCTTCAAGATTCCTTACCT GCTGCCTGTAGATTCAGATTTGTAGAGATAACATCTTCTTCCATTGTTATTATTCTAAAA GAAACTCCATTACCATCCTCTGACACTATCAGGGGTTATAAACTATGGTACTGGAAGAGC AGAGAGGAGCCAAGCATGGAAGAGCCTGTAGTTTTGTCCAAAGATCAAAGAAAAGTACTT GTTTTTAACCTTGCCCCATGCACACAGTATTCCTTCAGAATTATATCATTCACAGATGAT GGGATACTAGGCCATTCTGAATCTAAATGTTATACGGGGAGCAAGGAGTTATTGTTTAAA CGTACCACACAGAATGTAGCGGGAGCAGATGCACATACACATAGAAGAGAGAAGACACAG GCTTTTAAGTCGACTGGATTTAAGATCCGAGATGTTGGGAAGATATTGCGGCAAGCTTGG ACTGAGGAAGGCCGTTTTGAAGGGTTTTGTGAAGATATGCATGAAGCTTCATGTGACAGA AGTGTCACAGACGTGGAGCAAACAGAGAACAGTGAACAGGGTCAATTGTTATCTGGTGCG TGCCGCAAACTTCAGTTCAGCACATTTTCTGTTCCTGACCTAAACGTTGAGGCACCTGTC CCCATGGACATTTCCCCGGACAAGTGTTACAATTCAAAGATTGTACCAGTAAGATCCAAC GATAGTGGTGGCTCAGAGACCTGCGCGGTGGGCCGGAGTGCTGAAGCTGAACCACCTGCT GTTGAATCTCGGCCAGAGGGCTGTGAACAAGATGGTGCTTCCACTATTTGCCGTGAGAAG CAGCTTGCAAGACCGAGGGAGTTGGATGAGGACTTTGAGTACTGTGTGCAGAAGATCAGG ATGCTGGAATGCAAGGGACACATAGATAATGATTTCAGGATGAAGTTCTTGACCTGGTTT AGTCTAAGATCAACGGAGAATGACCGTAGAGTTGTAACTACATTCATCAAAACACTAATC AATGAGCCAAGTGGTCTGGCTGAGCAGCTTGTTGATTCCTTTGGAGAAGCCATAAACTGC AAGAGGCAACGAAATGGTTTCTGCAATGAGCTTTGGCATGATGACAAAGGACAATAATTC AAGATTTTGCTAACTCATTGATATCCTACAGTTTTTATGATCAAATGCAGTGACATCTGT TTCGGTTGACCACTACATTTAGGATTCAACAGCAAAAGAGGGAGGAGGACATTGATGGAG GTGACAAATTTTTAGGCACCAAATAGGCTGCACCAAAAGAATTCTTTTTCCACCAAGAAT TTGTGGAAATATTTTTTTTCATTGGTTCAGTAGTTTCTAGTTTCCTGTCGAAATCTGAAA GGTCTCGTGGTGTTGTATCTCTTGCTACCTCTGCTAGGTAAACTTACGAATAATTTTTTG GCACTAGATATTGGCTAGACAGGCTTATATTCGTGTATATGTTACTTAATTTGGTTAGTA TACATCTTTCAAATGCTTCCCGTTG