Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0145300-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2609407:2612536:1 gene:Os05g0145300 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os05t0145300-01);Similar to predicted protein. (Os05t0145300-02)
Sequence	ATGTGGGCTGTGCGGAGTCTCCGCCGTAACCTCCTGCGAGCGGCCTCCTCGCCGCTCCAC CCCAGGTGCCCTCTCCCCCCCGGGAGCTTCGCGGCGGGATGCGGCGGCGAGGCTGCGGCT GCGGCGTCGGCGCGGTCCGCGTTGCTGCCGCCGCCGGGGGCGGGGGGCGGGTGGTGGCGG CGGCGGATGATGTCGACGACGAAGGGGAGGAGCATGCGGAGCAAGGTGGAGAAGCGGATG GCGAGGGAGACCGGGCGCACGCAGCGGGAGCTGCGGCGCGCCGTCAAGCTCAGGAAGAAG CTCATGACCGACGATGAGAGGCTCATCTACAGCCTCAGGAGGGCCAAGAAAAAAGTTGCT TTGCTTCTACAAAAGCTCAAGAAGTATGAGCTACCAGACTTGCCAGCTCCTCGACATGAT CCCGAGCTGTTGACAGCCGAGCAACTACAGGCTTACAAGAAGATTGGATTCAGAAATAGA AACTACGTGCCTGTAGGAGTTCGTGGAGTTTTTGGAGGTGTTGTTCAAAACATGCATATG CACTGGAAATTCCATGAAACTGTGCAAGTTTGCTGTGACAACTTCCCAAAGGAAAAAATC AAGGAAATGGCAGCGATGCTGACAAGATTGAGTGGTGGCATAGTGATCAACATTCATAAT ACCAAGACGATTATCATGTTTCGAGGAAGAAACTATCGTCAACCAAAGAACCTCATACCT TTGAACACACTAACCAAAAGGAAGGCTTTATTCAAGGCTAGATTTGAGCAGGCTCTAGAG TCACAGAAACTAAACATCAAGAAGATAGAGACACAACTCCGTCGTAAGGGTATCAATCCG GAGGACCCAGTTGCCATGGCCAGCATACAGCGAGTTGCATCAACATTCTTCCGAGCCATA GATGAGCAGCAGGGTACTCCCTACGTCTTCCGTGGTGATACACAACCAACTGCTGGGACC ACTGAAATAAAGGAACCACATGATCAGCAATCTGAGGATAGCGACCAGGAAGAGCTTGAT CGCTTTATAGCAGAAATAGAGACCGCAGCTGAGCAGCAATGGGAGGAAGAAGAGGCAGCG GAGAAAGAAGAATCTTCTCGACTGCGATACTGGGACAGAGAAGAGGGGAGTGAGAGGAGG GGTTTCAATAGGAGCTACGACAACCCAGGCAATGAATATAGAGACCAGGGAAGATACACG AGAGACAACAACAGAAGGACAGCGGATTCAAGGAGGTGGGACGATGATAGCGAGATAGAT GTGTCAGGTGAGGAATGGGACTCTGATGACGATAAGGATAATGTATTTGACAATGACGTA GATGCTCCTGATGAACACCCTCGACGATTTGAAAGCATGAGAAGCGAGAAGAGCAGATCC GATCGCAGTCGGAATTATACATCTAGGGGTTCCAGAAGTTCCATTGAGAAACCAAGGAAT TCAGCTACTGCTTCTGGTAGAAGCGTGTTCAGGGAAAGTGAGGATGATGAGTTAGATACT GAAGATGATGAGTTGTGGGGACCAGATTTGAAGGAAGAGAGAAACTTGAGAGCCCCTAAG GTGAATTTCGCTAACTATCACAGTGGCACCAGCAGCGAGGAGGACACTGATGACAACTGG AAACAAGACTCCAGGACTGGCAATACGAGGAAGAATACTGATGAGAGCTGGGACAGTGAC TAA

Peptide Sequence

PEP ID	Os05t0145300-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2609407:2612536:1 gene:Os05g0145300 transcript:Os05t0145300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os05t0145300-01);Similar to predicted protein. (Os05t0145300-02)
Sequence	MWAVRSLRRNLLRAASSPLHPRCPLPPGSFAAGCGGEAAAAASARSALLPPPGAGGGWWR RRMMSTTKGRSMRSKVEKRMARETGRTQRELRRAVKLRKKLMTDDERLIYSLRRAKKKVA LLLQKLKKYELPDLPAPRHDPELLTAEQLQAYKKIGFRNRNYVPVGVRGVFGGVVQNMHM HWKFHETVQVCCDNFPKEKIKEMAAMLTRLSGGIVINIHNTKTIIMFRGRNYRQPKNLIP LNTLTKRKALFKARFEQALESQKLNIKKIETQLRRKGINPEDPVAMASIQRVASTFFRAI DEQQGTPYVFRGDTQPTAGTTEIKEPHDQQSEDSDQEELDRFIAEIETAAEQQWEEEEAA EKEESSRLRYWDREEGSERRGFNRSYDNPGNEYRDQGRYTRDNNRRTADSRRWDDDSEID VSGEEWDSDDDKDNVFDNDVDAPDEHPRRFESMRSEKSRSDRSRNYTSRGSRSSIEKPRN SATASGRSVFRESEDDELDTEDDELWGPDLKEERNLRAPKVNFANYHSGTSSEEDTDDNW KQDSRTGNTRKNTDESWDSD

Transcript Sequence

Transcript ID	Os05t0145300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2609407:2612536:1 gene:Os05g0145300 gene_biotype:protein_coding transcript_biotype:protein_coding description:RNA-binding, CRM domain domain containing protein. (Os05t0145300-01);Similar to predicted protein. (Os05t0145300-02)
Sequence	CGGCCCATCTCAACCAAACCCAATCCAACCCAACCCGCTTCAGGGTTTATCGCTCACGCC GCGCCGCCTCCTCACCCCCGCCTCCCGCCGCCGCCGCTTCTCCCCGAACCTTCGCCGGCG AACGGCCGGGCATGTGGGCTGTGCGGAGTCTCCGCCGTAACCTCCTGCGAGCGGCCTCCT CGCCGCTCCACCCCAGGTGCCCTCTCCCCCCCGGGAGCTTCGCGGCGGGATGCGGCGGCG AGGCTGCGGCTGCGGCGTCGGCGCGGTCCGCGTTGCTGCCGCCGCCGGGGGCGGGGGGCG GGTGGTGGCGGCGGCGGATGATGTCGACGACGAAGGGGAGGAGCATGCGGAGCAAGGTGG AGAAGCGGATGGCGAGGGAGACCGGGCGCACGCAGCGGGAGCTGCGGCGCGCCGTCAAGC TCAGGAAGAAGCTCATGACCGACGATGAGAGGCTCATCTACAGCCTCAGGAGGGCCAAGA AAAAAGTTGCTTTGCTTCTACAAAAGCTCAAGAAGTATGAGCTACCAGACTTGCCAGCTC CTCGACATGATCCCGAGCTGTTGACAGCCGAGCAACTACAGGCTTACAAGAAGATTGGAT TCAGAAATAGAAACTACGTGCCTGTAGGAGTTCGTGGAGTTTTTGGAGGTGTTGTTCAAA ACATGCATATGCACTGGAAATTCCATGAAACTGTGCAAGTTTGCTGTGACAACTTCCCAA AGGAAAAAATCAAGGAAATGGCAGCGATGCTGACAAGATTGAGTGGTGGCATAGTGATCA ACATTCATAATACCAAGACGATTATCATGTTTCGAGGAAGAAACTATCGTCAACCAAAGA ACCTCATACCTTTGAACACACTAACCAAAAGGAAGGCTTTATTCAAGGCTAGATTTGAGC AGGCTCTAGAGTCACAGAAACTAAACATCAAGAAGATAGAGACACAACTCCGTCGTAAGG GTATCAATCCGGAGGACCCAGTTGCCATGGCCAGCATACAGCGAGTTGCATCAACATTCT TCCGAGCCATAGATGAGCAGCAGGGTACTCCCTACGTCTTCCGTGGTGATACACAACCAA CTGCTGGGACCACTGAAATAAAGGAACCACATGATCAGCAATCTGAGGATAGCGACCAGG AAGAGCTTGATCGCTTTATAGCAGAAATAGAGACCGCAGCTGAGCAGCAATGGGAGGAAG AAGAGGCAGCGGAGAAAGAAGAATCTTCTCGACTGCGATACTGGGACAGAGAAGAGGGGA GTGAGAGGAGGGGTTTCAATAGGAGCTACGACAACCCAGGCAATGAATATAGAGACCAGG GAAGATACACGAGAGACAACAACAGAAGGACAGCGGATTCAAGGAGGTGGGACGATGATA GCGAGATAGATGTGTCAGGTGAGGAATGGGACTCTGATGACGATAAGGATAATGTATTTG ACAATGACGTAGATGCTCCTGATGAACACCCTCGACGATTTGAAAGCATGAGAAGCGAGA AGAGCAGATCCGATCGCAGTCGGAATTATACATCTAGGGGTTCCAGAAGTTCCATTGAGA AACCAAGGAATTCAGCTACTGCTTCTGGTAGAAGCGTGTTCAGGGAAAGTGAGGATGATG AGTTAGATACTGAAGATGATGAGTTGTGGGGACCAGATTTGAAGGAAGAGAGAAACTTGA GAGCCCCTAAGGTGAATTTCGCTAACTATCACAGTGGCACCAGCAGCGAGGAGGACACTG ATGACAACTGGAAACAAGACTCCAGGACTGGCAATACGAGGAAGAATACTGATGAGAGCT GGGACAGTGACTAATGAAGAATAAGAAATCGAATATTTCGAAACTAAGATATTTCATGGC TGCCACAGGTTACATTCTCGCCTAACGGTGAACTGGATGGAAGACAATACACTTGGTTTT GGTGAGACCAACTGTTCTTTTAACAGTTCATATTGAAACCTTCAGAGTTCAGACATTGCT TTGGTCCCAACTGACATCGCTATAAATTGCCTGCATTGGATCTTAGACTGCAATGACACT GCTATCACATCCTCAAATCAGGGGCCTGCATGTTTTAGGCATGCGAATTCCTTGGGCTCT TAACAAAGAGACATGCACATATACATACTTTGATGGTCCTGTATGTCGTCGTCTATGTCG AGATATATGATGTATTCATTGAATTACTTCATTGAATGCTCTTGATAAGCTTAAGAAAGC ACTGCC