Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0145000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2598549:2604164:-1 gene:Os05g0145000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLEN TUBE BLOCKED 1 description:RING-type E3 ubiquitin ligase, Control of pollen tube growth, Regulation of seed setting rate (Os05t0145000-01)
Sequence	ATGGCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCGCC ACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGTTG CACATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCGTC GATAATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTCGT TTTTGTGGGAGAATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTTGG GTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGGAA GGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTATT GCGTGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCACAA CAGGGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATTGG GCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATCCT GGTCTTTATTTAACAGCTGCCCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCCCG AAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTGGAGGAA TTCCATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGTGC ATCGACCAGTGGCTCCGGCTGAATGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCCCC AACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGTCG GCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTGGG CAGAGCTACCTGCTGCGGCTGCAGGGGCTGCTGCTGCGGCAGGTGGTGGTTCGGCACGGC GGCGGCGACGACATGGCGAGCGCCGAGAACGGCGCTTCTCATGTGGCCGCCGCGGTGACC GCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGACGGTGGG CATCAGCTGCCGGATCGCTGA

Peptide Sequence

PEP ID	Os05t0145000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2598549:2604164:-1 gene:Os05g0145000 transcript:Os05t0145000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLEN TUBE BLOCKED 1 description:RING-type E3 ubiquitin ligase, Control of pollen tube growth, Regulation of seed setting rate (Os05t0145000-01)
Sequence	MAMRGVDFKWYDGFFLSMLATSLIIVSINWKRYRLCAHPLHIWIVVDYTTVFIFRLLMFV DNGLAAGMGLDLGWQQRYARFCGRIVVLSVLVLLLYPFLWVWTVIGTLWFSTARGCLPEE GQKWGFLIWLLFSYCGLACIACVAVGKWLSRRHALQQRAQQGIPVSEYGVLVDMIRVPDW AFEAVGLEMRGMGQDTAYHPGLYLTAAQREAVEALIQELPKFRLKAVPTDCSECPICLEE FHVGNEVRGLPCAHNFHVECIDQWLRLNVKCPRCRCSVFPNLDLSALNNLRPSSEPDRPS ASEVTAATMARYVRSSQPAGQSYLLRLQGLLLRQVVVRHGGGDDMASAENGASHVAAAVT APATTGGVESELPSIVVDGGHQLPDR

Transcript Sequence

Transcript ID	Os05t0145000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2598549:2604164:-1 gene:Os05g0145000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:POLLEN TUBE BLOCKED 1 description:RING-type E3 ubiquitin ligase, Control of pollen tube growth, Regulation of seed setting rate (Os05t0145000-01)
Sequence	GAAAAGCTTCTTCGCTTCGCCGCCTCCTCCCCCTCTCTCCGGCGCGTTCGCCGCTCGCGA TCCTCCCGGCGCCGCCGCCGCCGCCGCGCGGGGGCCCTACTCGCGTCGACGCCGGGAGGG GGACGCCGTACTCCCTCCTCCTCGCGTCGCCCCGCCCCGCCGCCGAGTGCGACGCCGCTC TCTCTCTCTCTCTCCTCGCGAGAAACCCTAGCTGGAGTTGAAGTGAGGGGCTCACTGAAG TGAGCGGAGTGCGGGGGCGTGGATGCTGCCGCGCTCCTCCGGCCAGATCTAGCTAGCAGG CCATGGCGATGCGGGGGGTCGATTTCAAGTGGTACGATGGATTCTTCCTCTCCATGCTCG CCACCAGCCTAATCATTGTCTCCATCAACTGGAAGAGGTATCGTCTCTGCGCCCACCCGT TGCACATATGGATCGTGGTTGACTACACCACCGTCTTCATCTTCCGCCTTCTCATGTTCG TCGATAATGGCCTTGCCGCCGGCATGGGATTGGATCTTGGATGGCAACAGAGATATGCTC GTTTTTGTGGGAGAATTGTTGTCTTGTCGGTTCTTGTGCTTCTTCTCTATCCCTTTCTTT GGGTTTGGACTGTGATAGGAACATTGTGGTTTAGCACTGCAAGAGGCTGTTTACCCGAGG AAGGACAAAAATGGGGCTTCCTTATATGGCTGCTTTTCAGCTACTGTGGTCTCGCCTGTA TTGCGTGTGTGGCTGTTGGAAAGTGGCTAAGCCGAAGGCATGCTCTCCAGCAGAGGGCAC AACAGGGAATACCAGTCTCTGAATATGGGGTTTTGGTTGACATGATCCGTGTGCCTGATT GGGCATTTGAGGCCGTTGGCTTGGAAATGAGAGGAATGGGCCAAGATACTGCATATCATC CTGGTCTTTATTTAACAGCTGCCCAAAGAGAGGCAGTTGAGGCACTGATTCAAGAACTCC CGAAGTTCAGACTGAAAGCTGTTCCTACAGACTGCAGTGAGTGTCCAATCTGCCTGGAGG AATTCCATGTTGGCAACGAGGTCCGTGGGCTCCCGTGCGCGCACAATTTCCATGTGGAGT GCATCGACCAGTGGCTCCGGCTGAATGTCAAGTGCCCCCGTTGCCGGTGCTCCGTCTTCC CCAACCTCGACCTGAGCGCGCTCAACAACCTCCGGCCATCCTCCGAGCCGGACCGGCCGT CGGCCAGCGAGGTGACAGCGGCGACGATGGCGCGGTACGTGAGGTCGTCGCAGCCGGCTG GGCAGAGCTACCTGCTGCGGCTGCAGGGGCTGCTGCTGCGGCAGGTGGTGGTTCGGCACG GCGGCGGCGACGACATGGCGAGCGCCGAGAACGGCGCTTCTCATGTGGCCGCCGCGGTGA CCGCGCCGGCGACCACCGGCGGCGTGGAGAGCGAGCTGCCTAGCATAGTGGTTGACGGTG GGCATCAGCTGCCGGATCGCTGAAGCGCCCGGTGGACGGCGTGATGTAGACTGATAGTTA TATGTGTGGGGAAGGGGAGGATCGAAGCTATGCAGCAGCATGTTTTTTTTTTCTTTGATC TTATCTCCTGTGTGCAGAGTGTATAAATATTATGTAAAGGAGATCATTATTGCAAGCTTT TGTTTCCCTTT