Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0143700-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:2521840:2522871:-1 gene:Os05g0143700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0143700-00)
Sequence

ATGGAAGCTGCATCATCATCGGGAGCTCTGCCATTGCCGTTGCCATTGCTCGTCCATGAT
CTTGGAACCCGTAGCGATGACTCGCAGACGCAATTCAGCATCTGCAACCAAGCACTCAGC
ACTGCAGCCATCGAGCTACTGAGAGATTTCAGGTGCTTCGAGACTCCACAAGGCTGGGTA
CTCACTCTGAATCCTGCGTCACTGCAAACCTTCCTATGGCGACCTCAGGACAGCAAGAAG
ATCGATCTCCCAACGGCGAAACAGAACTTCCCTAGAAGCGGCAAGTGCCTCCTCTCCGGC
AACCCAATCTCGTCGTCGTCAGATTGCGCCGTGTTGGTACTAGATCTTGACACCCCAGCG
ATGCTAGTCTGCAAGATCGGAGGCAGTGAATGGGATTCTTTCAGCTACGAGCTCTCCATG
GTCAGCAAGAACAACAAGACCCTGGAGGTTCACATGGCCAAGCTTCAGGGCATCGATGCT
GTTGCCGGCAAGGTGTACTACACATTCTCAGGAGACGCTCTCGGAGTAATCGAGTTCAGC
CTGGAGGTAAAACTCTCTACCATGGATGTCGACATGGTTGAATTGCCTGCCAGTATGCCA
AACTTCTCGACAGTCATGCGGCGAGCTGTTTCTTGTGGTCGTCTTCTTCCTCGGCCACAA
CCTGCACAGGATCGCGGAGGTGGCGGTGTACAAGATGGATTTCTCGGGGCCATCAGAGTG
GTGCAAGGTGGACGGGATCGGTGA

Peptide Sequence

PEP ID

Os05t0143700-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:2521840:2522871:-1 gene:Os05g0143700 transcript:Os05t0143700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0143700-00)
Sequence

MEAASSSGALPLPLPLLVHDLGTRSDDSQTQFSICNQALSTAAIELLRDFRCFETPQGWV
LTLNPASLQTFLWRPQDSKKIDLPTAKQNFPRSGKCLLSGNPISSSSDCAVLVLDLDTPA
MLVCKIGGSEWDSFSYELSMVSKNNKTLEVHMAKLQGIDAVAGKVYYTFSGDALGVIEFS
LEVKLSTMDVDMVELPASMPNFSTVMRRAVSCGRLLPRPQPAQDRGGGGVQDGFLGAIRV
VQGGRDR

Transcript Sequence

Transcript ID

Os05t0143700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:2521840:2522871:-1 gene:Os05g0143700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0143700-00)
Sequence

ATGGAAGCTGCATCATCATCGGGAGCTCTGCCATTGCCGTTGCCATTGCTCGTCCATGAT
CTTGGAACCCGTAGCGATGACTCGCAGACGCAATTCAGCATCTGCAACCAAGCACTCAGC
ACTGCAGCCATCGAGCTACTGAGAGATTTCAGGTGCTTCGAGACTCCACAAGGCTGGGTA
CTCACTCTGAATCCTGCGTCACTGCAAACCTTCCTATGGCGACCTCAGGACAGCAAGAAG
ATCGATCTCCCAACGGCGAAACAGAACTTCCCTAGAAGCGGCAAGTGCCTCCTCTCCGGC
AACCCAATCTCGTCGTCGTCAGATTGCGCCGTGTTGGTACTAGATCTTGACACCCCAGCG
ATGCTAGTCTGCAAGATCGGAGGCAGTGAATGGGATTCTTTCAGCTACGAGCTCTCCATG
GTCAGCAAGAACAACAAGACCCTGGAGGTTCACATGGCCAAGCTTCAGGGCATCGATGCT
GTTGCCGGCAAGGTGTACTACACATTCTCAGGAGACGCTCTCGGAGTAATCGAGTTCAGC
CTGGAGGTAAAACTCTCTACCATGGATGTCGACATGGTTGAATTGCCTGCCAGTATGCCA
AACTTCTCGACAGTCATGCGGCGAGCTGTTTCTTGTGGTCGTCTTCTTCCTCGGCCACAA
CCTGCACAGGATCGCGGAGGTGGCGGTGTACAAGATGGATTTCTCGGGGCCATCAGAGTG
GTGCAAGGTGGACGGGATCGGTGACAGTGTGTTTCTTCTCGGTGGAGATTTCATCGGAGC
TTCTAATTTTGGAGCGTCGTGCTCGGCTAGTGACCATGGTTTGTCCGGGAATTGCATCAA
TTTTGTGAACAATATTGCCGCTGAGGAGAATTTTGTTCATGTCATCGACTTGGAGAAAGG
GACTGAAGAAGTGCTTCGGCCTTTCAGACACAAAGGATACCCGCTGCCGCTGCGTCCACC
CTTCTGGCTATTAACCACCCATGATTGATATCTTTTCCTTGTAGAATTTGCACCTCACTT
GTCATATTTGTT