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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0142200-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:2452663:2453318:-1 gene:Os05g0142200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0142200-00)
Sequence

ATGGCTCGTGCCAAGAACTCCTCTTCTGGCAATGGCGAGGTGGATGTCCAGAAGGTGGAG
AAGATCGCCCCGGTCTACAACCTCGTCACCAAGCCCTCCGTCTACGGCGCCAACCGGAGG
GCGACGACGGTGAAGGCGAGGCCGGCGACCACTGCCGTCGCCGCCGGCTTCGCCGGGAGC
AGCAACAGTAGGCAGCCGGCGCCGGCGCCGGCGAGCTGGCCGCATGGATCAGTGGTCACC
AAGGAGTTCATCAGCAAGTACATCGAGGACAAGAAGAGGCAGTTTAATCAAGGAGACGAA
TGA

Peptide Sequence

PEP ID

Os05t0142200-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:2452663:2453318:-1 gene:Os05g0142200 transcript:Os05t0142200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0142200-00)
Sequence

MARAKNSSSGNGEVDVQKVEKIAPVYNLVTKPSVYGANRRATTVKARPATTAVAAGFAGS
SNSRQPAPAPASWPHGSVVTKEFISKYIEDKKRQFNQGDE

Transcript Sequence

Transcript ID

Os05t0142200-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:2452663:2453318:-1 gene:Os05g0142200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0142200-00)
Sequence

AGCAATCAAGCAGGCAAAGCTCAGCTTCAGCAACAACACAATTCAATTACAGTCACAATT
AGTGAGCCAAGAAAGAAAGAAATTAGAAACGCCATGGCTCGTGCCAAGAACTCCTCTTCT
GGCAATGGCGAGGTGGATGTCCAGAAGGTGGAGAAGATCGCCCCGGTCTACAACCTCGTC
ACCAAGCCCTCCGTCTACGGCGCCAACCGGAGGGCGACGACGGTGAAGGCGAGGCCGGCG
ACCACTGCCGTCGCCGCCGGCTTCGCCGGGAGCAGCAACAGTAGGCAGCCGGCGCCGGCG
CCGGCGAGCTGGCCGCATGGATCAGTGGTCACCAAGGAGTTCATCAGCAAGTACATCGAG
GACAAGAAGAGGCAGTTTAATCAAGGAGACGAATGAGCAGTAAACTCAGATTAATATTAT
CAGTTGATCGATCAGTGCAATATTATCATGTAATATTTAGTATAAATACAGCTACATATC
TACATAAGAAGATGCTCTACTTATTAGTTATTATGTATTAATTAGAAATGCATATAATAT
GTAAGTATTCCATGAGAGTAGAACTCATGAATATGTATATCTAGCTTCCAGATGGAGTTG
TTTATAAAGTATATTAACGAGTTATATATATGACCTGAAATTTATGGTTTTCAGCT