Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0140500-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2331061:2334123:1 gene:Os05g0140500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsY14a, Y14a, Tsunagi, RBM8 description:RNA binding motif protein 8 family protein. (Os05t0140500-01);Core subunit of exon junction complex (EJC), Multiple organ development and reproduction (Os05t0140500-02)
Sequence	ATGGCTGCGGTGACCAACGCCGATGTGGAGGCGGTCGACTTCGACCCCGATGACGACGAC CTCATGGACGAGGACGCCGCCGACCCCACGCCGGCGCCCGCCCCGCGCCTCCGCTCCACC ATCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCGACGACGGGCAACGCAAGACCAAGGGC CGCGGGTTCCGCGACGACGCCGCGCCCCGCGACTCCCGCTTAGCCGGCGCCGGGCGCGCC TCCGACTTCGACTCCCTCGGCTCCGACGGTGGCCCTGGCCCCGTCCGATCCATTGAAGGA TGGATTGTGCTAGTCACTGGGGTTCATGAAGAAGCTCAGGAAGATGATCTTCACAATATT TTCCGGGACTTTGGGCAGGTCAAGAACTTGCATTTGAATTTGGATCGCCGAACTGGATTC GTGAAGGGATATGCTCTTATTGAGTATGAAACTTTCGAGGAAGCTCAGGCTGCAATAAAA GCATTGGATGGAACTGAGCTTCTAACACAAATCATAAGTGTTGATTGGGCATTTAGTAAT GGCCCTGTCAAGCGCAGGAATATTCGGAAGAGATCACCAAGACGCTCCAGATCCCCACCG AGGAGAAGATACTGA

Peptide Sequence

PEP ID	Os05t0140500-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2331061:2334123:1 gene:Os05g0140500 transcript:Os05t0140500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsY14a, Y14a, Tsunagi, RBM8 description:RNA binding motif protein 8 family protein. (Os05t0140500-01);Core subunit of exon junction complex (EJC), Multiple organ development and reproduction (Os05t0140500-02)
Sequence	MAAVTNADVEAVDFDPDDDDLMDEDAADPTPAPAPRLRSTIAGGGGGGGGGDDGQRKTKG RGFRDDAAPRDSRLAGAGRASDFDSLGSDGGPGPVRSIEGWIVLVTGVHEEAQEDDLHNI FRDFGQVKNLHLNLDRRTGFVKGYALIEYETFEEAQAAIKALDGTELLTQIISVDWAFSN GPVKRRNIRKRSPRRSRSPPRRRY

Transcript Sequence

Transcript ID	Os05t0140500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2331061:2334123:1 gene:Os05g0140500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OsY14a, Y14a, Tsunagi, RBM8 description:RNA binding motif protein 8 family protein. (Os05t0140500-01);Core subunit of exon junction complex (EJC), Multiple organ development and reproduction (Os05t0140500-02)
Sequence	AAAAAAAAATCCGACCTTTGCATCGTGCGAGCCTCAAACCCGCGAACCCCCAAACCCTAG TTTCCCCAACCGCGGCGGCGGCGGCGATGGCTGCGGTGACCAACGCCGATGTGGAGGCGG TCGACTTCGACCCCGATGACGACGACCTCATGGACGAGGACGCCGCCGACCCCACGCCGG CGCCCGCCCCGCGCCTCCGCTCCACCATCGCGGGCGGCGGCGGCGGCGGCGGCGGCGGCG ACGACGGGCAACGCAAGACCAAGGGCCGCGGGTTCCGCGACGACGCCGCGCCCCGCGACT CCCGCTTAGCCGGCGCCGGGCGCGCCTCCGACTTCGACTCCCTCGGCTCCGACGGTGGCC CTGGCCCCGTCCGATCCATTGAAGGATGGATTGTGCTAGTCACTGGGGTTCATGAAGAAG CTCAGGAAGATGATCTTCACAATATTTTCCGGGACTTTGGGCAGGTCAAGAACTTGCATT TGAATTTGGATCGCCGAACTGGATTCGTGAAGGGATATGCTCTTATTGAGTATGAAACTT TCGAGGAAGCTCAGGCTGCAATAAAAGCATTGGATGGAACTGAGCTTCTAACACAAATCA TAAGTGTTGATTGGGCATTTAGTAATGGCCCTGTCAAGCGCAGGAATATTCGGAAGAGAT CACCAAGACGCTCCAGATCCCCACCGAGGAGAAGATACTGAGTGCTCCCCACCATGTGAT GATGGTGCTTTAGAATGCAAGAATTGCTTGTAGGATTCCGGTTGTTTGCTTGGCCTCCTA CCGTAGTTTGATTATCAATATTAGCTCGTCTGCTATTTTCAGTCGATGGCTGTGATAGTT CTGTGGCATTGTAACTCTTTTCAGTATATGGATGGAGCTGTGTTTACTGTTCCAAGTTTG GCACGCTAGTTGCCGTGGATTGT