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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0140300-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:2325838:2326680:1 gene:Os05g0140300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0140300-00)
Sequence

ATGGCGACCACGACGACGACGGAGTCGCTGCTGCCGATCGGCCGCGTCGAGGCGGCGGCG
GCGGAGGAGGAGGTGGTGCTCGGCGCCGGAGACGACGACAGTGACGTGGAGAGTGGTGGT
GAGTCGTCGTTTAGCAGGGAGGTCAGGAAGCGTGTGTCACGCCTCTCCGTCGAGGGCGGC
GGCGGCGGCGGCGGAGGCGGCGTGAGGGATCGCCGGGGTAGCAGTGGAGGTGGCCGGAGG
GTGCTGCCGCCGCCGCACGCGTGGCTGGCGGTGGAGGAGACGGCGGCGAGGAAGAGCTAC
GGGAGCGACCCGGAGGAGCAGTGGATGCGGGTGCTGCAGGGGGGAGCTTACGGCGGCGGC
GGGGTGGCGGCGGCGGCGGCGGCGCAGAGGCAGGTGCAGCGGCGGAGCAGCTTCAGCGTG
GTGCGGCGGGAGAGGGCCGCGAGGGAGGCGTGGCTGGACAGGGCGTGGGAGATGAAGCGG
AGCTGGCACGAGCGGAACGGCGGCGCGCCCGACGCCGACACGCCGGTGGTGGTGGTCGTC
GGGAAGGGCCCCCCGTCGTCGCCGACGTCACACGCCGCCGGCTCTGTCGGCGGCGGCGGT
GTCGCCATGGACATGGAGGAGGTCCGCGCCTGCAGGGACCTCGGCCTGGAGCTCCCCTCC
GACTGCACCGTGGAGATACAATGCTACGGCCTCTCCGCCACCAGCAGCCCCACCCACACC
AACTCCGGCAGCTGCAGCAGCGGCGCCGCCTCCCCCTCCGCCGCCGCCGCCTGCTCCCTC
CCCAGTCCCGGTACGTCCTCTCTCCAACAAAGTATTTTCTACGCCTATAAGTATCTGATT
TAA

Peptide Sequence

PEP ID

Os05t0140300-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:2325838:2326680:1 gene:Os05g0140300 transcript:Os05t0140300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0140300-00)
Sequence

MATTTTTESLLPIGRVEAAAAEEEVVLGAGDDDSDVESGGESSFSREVRKRVSRLSVEGG
GGGGGGGVRDRRGSSGGGRRVLPPPHAWLAVEETAARKSYGSDPEEQWMRVLQGGAYGGG
GVAAAAAAQRQVQRRSSFSVVRRERAAREAWLDRAWEMKRSWHERNGGAPDADTPVVVVV
GKGPPSSPTSHAAGSVGGGGVAMDMEEVRACRDLGLELPSDCTVEIQCYGLSATSSPTHT
NSGSCSSGAASPSAAAACSLPSPGTSSLQQSIFYAYKYLI

Transcript Sequence

Transcript ID

Os05t0140300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:2325838:2326680:1 gene:Os05g0140300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0140300-00)
Sequence

ATGGCGACCACGACGACGACGGAGTCGCTGCTGCCGATCGGCCGCGTCGAGGCGGCGGCG
GCGGAGGAGGAGGTGGTGCTCGGCGCCGGAGACGACGACAGTGACGTGGAGAGTGGTGGT
GAGTCGTCGTTTAGCAGGGAGGTCAGGAAGCGTGTGTCACGCCTCTCCGTCGAGGGCGGC
GGCGGCGGCGGCGGAGGCGGCGTGAGGGATCGCCGGGGTAGCAGTGGAGGTGGCCGGAGG
GTGCTGCCGCCGCCGCACGCGTGGCTGGCGGTGGAGGAGACGGCGGCGAGGAAGAGCTAC
GGGAGCGACCCGGAGGAGCAGTGGATGCGGGTGCTGCAGGGGGGAGCTTACGGCGGCGGC
GGGGTGGCGGCGGCGGCGGCGGCGCAGAGGCAGGTGCAGCGGCGGAGCAGCTTCAGCGTG
GTGCGGCGGGAGAGGGCCGCGAGGGAGGCGTGGCTGGACAGGGCGTGGGAGATGAAGCGG
AGCTGGCACGAGCGGAACGGCGGCGCGCCCGACGCCGACACGCCGGTGGTGGTGGTCGTC
GGGAAGGGCCCCCCGTCGTCGCCGACGTCACACGCCGCCGGCTCTGTCGGCGGCGGCGGT
GTCGCCATGGACATGGAGGAGGTCCGCGCCTGCAGGGACCTCGGCCTGGAGCTCCCCTCC
GACTGCACCGTGGAGATACAATGCTACGGCCTCTCCGCCACCAGCAGCCCCACCCACACC
AACTCCGGCAGCTGCAGCAGCGGCGCCGCCTCCCCCTCCGCCGCCGCCGCCTGCTCCCTC
CCCAGTCCCGGTACGTCCTCTCTCCAACAAAGTATTTTCTACGCCTATAAGTATCTGATT
TAA