Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0139100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:2246835:2248876:1 gene:Os05g0139100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL16 description:Helix-loop-helix DNA-binding domain containing protein. (Os05t0139100-01)
Sequence	ATGCTACGCGGGAACGACACCGGCAGCGACCTGGCCGAGCTGCTCTGGGACAACGGCGCC CCGGCGCCGCTCAGGCCGCCTCCGCCTCCGCCCTTCCAGCCCTTCACCTGCAGCGCCGCC GCCACCACGTCGCCGCCGGCGCACGACTACCTCTTCATCAAGAATCTCATGCGGGGCGGC GGCGCCGCCAACCACCACCACCACGATGACGATGACGACGACGACGACGACGTGCCGTGG TTGCATTACCACCCTGTCGTGGACGACGACGACGACGCCGACGCTGACACGGCGCCGCTG CCTCCCGACTACTGCGCCGCCTTGCTCTCCGGCCTCTCCGACCACCTCCCGCCGCCCGCC GCTGCGGCGAGCAGGGTGGACCCCGACCCCTGCTCCTCCTCCCACGGCGCCGTCGTCCCG TCCACGTCCGCCGCCGCCGCCAAGCAGGCTCGCACGAGCGGCGGCGGCGGCGGCGGCGTC ATGAACTTCACCTTCTTCTCGAGGCCTCTGCAGCAGCGCCCCTCCGGCGGCGAGACCGCG TCGGCGTCGGCGTCGGCGGCGGCCACCTCGACCGTCCCCGTCGAGTCGACGGTGGTGCAG GCGGCGACGAACCGGCTGAGAAGCACCCCGCTCTTCTCCGACCAGAGGATGGCATGGCTG CACCCGCCCAAGCCGTCGCCACGCGCCGCCGCACCGCCGCCGCCGCCGCCTCTGGCCCCT ACCACTCGGCACCGACTCGACACCGCCGCCGCGACGGCGACGGTGGCGCAGAGGTTGCCG CCGTCCGAGGCAAGAGCTCCCGACGCGCCCCCGCCTGCCGCGACCGCGACGGCGACGACC TCGTCCGTCTGCTCCGGCAACGGCGACCGGAGACAGCTCAATTGGAGGGACAGCCACAAC AACCAGTCCGCCGAGTGGTCGGCCAGTCAAGACGAGCTGGACCTCGACGACGAGCTCGCA GGCGTCCACCGGAGGTCGGCGGCGAGGAGCTCCAAGCGCAGCCGCACCGCCGAAGTCCAC AACCTGTCAGAGCGGAGGAGAAGAGACCGGATCAACGAGAAGATGCGGGCGCTGCAAGAG CTCATCCCAAACTGCAACAAGATTGACAAGGCGTCGATGCTGGAGGAAGCCATCGAGTAC CTCAAGACGCTGCAGCTGCAGGTGCAGATGATGTCGATGGGGACGGGGATGTTCGTGCCG CCGATGATGCTGCCGGCGGCGGCGGCGGCAATGCAGCACCACCACATGCAGATGCAGCAG ATGGCCGGGCCAATGGCGGCGGCGGCGCATTTCCCCCACCTCGGCGCCGCCGCCGCCATG GGGCTCGCCGGCTTCGGCATGCCCGCCGCCGCGCAGTTCCCTTGCCCGATGTTCCCCGCC GCGCCGCCGATGTCCATGTTCGCGCCGCCGCCGCCGCCGCCGCCGTTCCCTCACGCGGCC GCCACCGCCGTCGAGCAGACGCCGTCTCCGCCGGGAGCAGCAGACGCCGGCAACGCCCCC GCCGTGAAGCAGGCGTGA

Peptide Sequence

PEP ID	Os05t0139100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:2246835:2248876:1 gene:Os05g0139100 transcript:Os05t0139100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL16 description:Helix-loop-helix DNA-binding domain containing protein. (Os05t0139100-01)
Sequence	MLRGNDTGSDLAELLWDNGAPAPLRPPPPPPFQPFTCSAAATTSPPAHDYLFIKNLMRGG GAANHHHHDDDDDDDDDVPWLHYHPVVDDDDDADADTAPLPPDYCAALLSGLSDHLPPPA AAASRVDPDPCSSSHGAVVPSTSAAAAKQARTSGGGGGGVMNFTFFSRPLQQRPSGGETA SASASAAATSTVPVESTVVQAATNRLRSTPLFSDQRMAWLHPPKPSPRAAAPPPPPPLAP TTRHRLDTAAATATVAQRLPPSEARAPDAPPPAATATATTSSVCSGNGDRRQLNWRDSHN NQSAEWSASQDELDLDDELAGVHRRSAARSSKRSRTAEVHNLSERRRRDRINEKMRALQE LIPNCNKIDKASMLEEAIEYLKTLQLQVQMMSMGTGMFVPPMMLPAAAAAMQHHHMQMQQ MAGPMAAAAHFPHLGAAAAMGLAGFGMPAAAQFPCPMFPAAPPMSMFAPPPPPPPFPHAA ATAVEQTPSPPGAADAGNAPAVKQA

Transcript Sequence

Transcript ID	Os05t0139100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:2246835:2248876:1 gene:Os05g0139100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIL16 description:Helix-loop-helix DNA-binding domain containing protein. (Os05t0139100-01)
Sequence	GATTCTCCCGCCTCCGCCGCGCGCCGCCATCCATCCTCCTCTCCGGCGACCTCATCCGTC TGCATGCTACGCGGGAACGACACCGGCAGCGACCTGGCCGAGCTGCTCTGGGACAACGGC GCCCCGGCGCCGCTCAGGCCGCCTCCGCCTCCGCCCTTCCAGCCCTTCACCTGCAGCGCC GCCGCCACCACGTCGCCGCCGGCGCACGACTACCTCTTCATCAAGAATCTCATGCGGGGC GGCGGCGCCGCCAACCACCACCACCACGATGACGATGACGACGACGACGACGACGTGCCG TGGTTGCATTACCACCCTGTCGTGGACGACGACGACGACGCCGACGCTGACACGGCGCCG CTGCCTCCCGACTACTGCGCCGCCTTGCTCTCCGGCCTCTCCGACCACCTCCCGCCGCCC GCCGCTGCGGCGAGCAGGGTGGACCCCGACCCCTGCTCCTCCTCCCACGGCGCCGTCGTC CCGTCCACGTCCGCCGCCGCCGCCAAGCAGGCTCGCACGAGCGGCGGCGGCGGCGGCGGC GTCATGAACTTCACCTTCTTCTCGAGGCCTCTGCAGCAGCGCCCCTCCGGCGGCGAGACC GCGTCGGCGTCGGCGTCGGCGGCGGCCACCTCGACCGTCCCCGTCGAGTCGACGGTGGTG CAGGCGGCGACGAACCGGCTGAGAAGCACCCCGCTCTTCTCCGACCAGAGGATGGCATGG CTGCACCCGCCCAAGCCGTCGCCACGCGCCGCCGCACCGCCGCCGCCGCCGCCTCTGGCC CCTACCACTCGGCACCGACTCGACACCGCCGCCGCGACGGCGACGGTGGCGCAGAGGTTG CCGCCGTCCGAGGCAAGAGCTCCCGACGCGCCCCCGCCTGCCGCGACCGCGACGGCGACG ACCTCGTCCGTCTGCTCCGGCAACGGCGACCGGAGACAGCTCAATTGGAGGGACAGCCAC AACAACCAGTCCGCCGAGTGGTCGGCCAGTCAAGACGAGCTGGACCTCGACGACGAGCTC GCAGGCGTCCACCGGAGGTCGGCGGCGAGGAGCTCCAAGCGCAGCCGCACCGCCGAAGTC CACAACCTGTCAGAGCGGAGGAGAAGAGACCGGATCAACGAGAAGATGCGGGCGCTGCAA GAGCTCATCCCAAACTGCAACAAGATTGACAAGGCGTCGATGCTGGAGGAAGCCATCGAG TACCTCAAGACGCTGCAGCTGCAGGTGCAGATGATGTCGATGGGGACGGGGATGTTCGTG CCGCCGATGATGCTGCCGGCGGCGGCGGCGGCAATGCAGCACCACCACATGCAGATGCAG CAGATGGCCGGGCCAATGGCGGCGGCGGCGCATTTCCCCCACCTCGGCGCCGCCGCCGCC ATGGGGCTCGCCGGCTTCGGCATGCCCGCCGCCGCGCAGTTCCCTTGCCCGATGTTCCCC GCCGCGCCGCCGATGTCCATGTTCGCGCCGCCGCCGCCGCCGCCGCCGTTCCCTCACGCG GCCGCCACCGCCGTCGAGCAGACGCCGTCTCCGCCGGGAGCAGCAGACGCCGGCAACGCC CCCGCCGTGAAGCAGGCGTGACGGCCATCACATCTCTGCATTTGCAATCGCCAATTCGCC ATTGCGGTGGCCTCGCCTAGCTTAGCTAGCTTTGATCTGAACAATTTTCAGTCTCACCTA GCTTGCTGTAGCAGAAACGTTCCAACTTTGTTCTAGCTGTAGCTTTGTAGTTGTAAAATT GAGGAAAATTTATGTAGATGAGCTACTGAAGTAGTAGTTCTTTTTTTGTTCGG