Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0132500-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:1889983:1894569:-1 gene:Os05g0132500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os05t0132500-01);Similar to auxin-independent growth promoter protein. (Os05t0132500-02)
Sequence	AAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTTC CTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCTT CCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCAT TTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTTT ATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGTC GCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACGT GCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTTC ATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGAG GCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATAT TACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAAT GGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAGA TGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCAA ATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCTA AGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACTT ATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGTT GATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACTT CTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAACT TTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCGC ACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGCA TCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAAG AGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCAT GAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCCC GTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTCG GTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTAC TCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCCT GACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCCA CGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCATT GTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTGT TCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCTC CTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTCT ACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTCT AGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGAT GAGGAGATGGATCCAGATGATTGA

Peptide Sequence

PEP ID	Os05t0132500-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:1889983:1894569:-1 gene:Os05g0132500 transcript:Os05t0132500-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os05t0132500-01);Similar to auxin-independent growth promoter protein. (Os05t0132500-02)
Sequence	KLATAIGIVLSMLSLLVHLFLANYSAGGITRYSLHMDDVLPFGPRPRPRRLWGSLSTLDH LHPYAKPRKIYPALDYHNGFIYAKIYGGFEKIQSSICDLVAVARLLNATLVIPEIQATTR AKGISSKFKSFSYLYDEDQFISALSSDVAIVRGLPKDLREARKKIKFPTVSPKNSATPEY YVTEVLPKLSKSKVIGIIINGGKCLQSILPATLEEFQRLRCRVAFHALKFRPEIRALGNQ IVSRLRVSGRPYLAYHPGLLRDTLAFHGCAELFQDIHTELIQYRRNQMIKRGTVKEQLSV DSVSRKINGSCPLMPEEVGLLLQALGYPSTTIIYLAGSETFGGQRILIPLRAMYANLVDR TSVCSQRELSDLVGPEAPLASDMAHPPPPKTEKELVDEWKRAGPRPRPLPPPPARPYYAH EKVGWYGWIGENDTEPDPSPVEFRRQAHRLLWDALDYFVSVEADAFFPGFHNDGSGWPDY SSLIMGHRLYQTPSGITYRPDRKTISALFENVSDHRYHPPRNWTLAARQHLNNSASVEGI VKSAMLSKPVSFLAHPLPECSCRTPKSPGVQSTKDSHGRLLFGGEEECPDWMVRSLAMVS TKNNEPQNEDYDGDLPEDDSSQDTQQESDRSDMNKSSEQDEEMDPDD

Transcript Sequence

Transcript ID	Os05t0132500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:1889983:1894569:-1 gene:Os05g0132500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF246, plant family protein. (Os05t0132500-01);Similar to auxin-independent growth promoter protein. (Os05t0132500-02)
Sequence	CAAGTTGGCCACAGCGATTGGCATCGTGCTGTCGATGCTATCGCTGCTGGTGCACCTTTT CCTTGCGAATTATTCTGCTGGGGGAATCACAAGATATAGTCTGCATATGGATGATGTCCT TCCGTTTGGACCAAGGCCTCGACCCCGGAGATTGTGGGGTTCGTTGAGTACACTTGATCA TTTACACCCTTATGCGAAACCTAGAAAAATCTACCCTGCTCTGGATTATCATAATGGTTT TATTTATGCAAAGATCTATGGTGGCTTTGAGAAGATACAATCTTCAATCTGTGATCTTGT CGCCGTTGCCAGGCTCTTAAATGCCACCCTAGTTATTCCTGAGATTCAAGCAACGACACG TGCAAAAGGCATCAGTTCAAAATTCAAGAGCTTTTCATATCTATATGATGAAGATCAGTT CATTTCCGCACTTTCCAGTGATGTAGCTATTGTGCGTGGTTTGCCAAAGGATCTCAGGGA GGCTAGAAAAAAGATAAAATTTCCCACAGTATCACCTAAAAACTCGGCTACTCCAGAATA TTACGTGACAGAAGTCCTGCCAAAACTTTCCAAGTCAAAAGTTATTGGGATAATCATTAA TGGAGGCAAATGTCTCCAGTCAATCCTTCCAGCAACCTTGGAGGAATTTCAGAGGCTTAG ATGCAGGGTAGCCTTCCATGCTTTGAAGTTCCGTCCAGAAATTCGTGCTCTCGGGAACCA AATAGTTAGCAGATTACGTGTATCTGGTCGTCCTTATCTAGCATATCACCCAGGACTGCT AAGAGATACTCTAGCTTTTCATGGTTGTGCTGAACTGTTCCAGGATATTCATACAGAACT TATTCAATATAGAAGGAATCAGATGATCAAACGAGGAACTGTAAAGGAACAATTATCAGT TGATTCAGTGTCCAGGAAGATAAATGGTTCATGTCCACTCATGCCAGAAGAGGTTGGACT TCTGCTTCAGGCATTAGGTTATCCATCAACTACAATAATATACTTGGCTGGTTCTGAAAC TTTTGGTGGACAGAGAATACTTATTCCACTACGAGCTATGTATGCCAACTTAGTTGATCG CACTTCTGTATGTAGTCAGAGGGAGTTATCTGATTTAGTTGGCCCAGAGGCTCCTCTTGC ATCAGATATGGCACACCCTCCACCTCCCAAAACTGAGAAAGAACTCGTTGACGAATGGAA GAGAGCAGGGCCTCGCCCAAGACCGCTGCCACCACCTCCTGCAAGGCCATACTATGCTCA TGAAAAAGTAGGCTGGTATGGCTGGATTGGTGAGAATGACACAGAACCAGATCCTTCTCC CGTTGAATTTAGAAGGCAAGCGCATCGGTTGCTCTGGGACGCACTTGATTATTTTGTTTC GGTTGAAGCTGATGCATTCTTTCCTGGGTTTCATAATGATGGGAGTGGCTGGCCAGACTA CTCAAGTTTGATCATGGGGCATCGGCTATACCAAACCCCATCTGGTATAACCTATAGGCC TGACAGAAAGACTATTTCTGCGCTTTTCGAAAATGTTAGTGACCATCGGTATCACCCGCC ACGGAATTGGACATTGGCTGCACGCCAACATCTCAATAACAGTGCAAGTGTAGAAGGCAT TGTAAAATCAGCGATGCTGTCAAAACCTGTATCTTTTCTTGCCCACCCATTACCAGAGTG TTCTTGTAGAACGCCAAAGTCACCTGGTGTTCAGTCGACGAAAGATAGCCATGGTAGGCT CCTATTTGGAGGTGAAGAAGAGTGTCCTGATTGGATGGTTCGCAGCTTGGCCATGGTGTC TACCAAGAATAATGAGCCTCAAAATGAGGATTACGACGGCGACTTGCCTGAAGATGATTC TAGCCAAGACACACAGCAGGAATCTGATAGAAGTGACATGAATAAATCCTCAGAACAGGA TGAGGAGATGGATCCAGATGATTGAACACATGCGGAGCTTGGTACTATGGCGCACCTTTT ATCCGCTATATCAGCTCCAGGTAACCTTGAGTGATATCAGCACACATTGCAATTTGCAGG GATCTACTGGACAAATCGGATCAGTTTGCAGCAACACATCCTGAGCTAGGAGAGCCCAAG AATGATATATGATATGTACACCTCGGATGCTTTGCTTGGACTACTATCTTGAGTTATACG ACCTCGACACAGGAACTAACACTTAGGTTCTTTTTCCTCCTTTTACGCCTTCTTTTTGAC CTGAAGAAATTGCTTGTGTACAAATGTCTATTAACAGGGAATACATTGATTTTTTTGGGG TG