Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0132100-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:1867386:1871382:-1 gene:Os05g0132100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain acyl-CoA synthetase 1 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0132100-02);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-03);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-04)
Sequence	TTGCAGCAGCTGGGGGTGAAGCCAGGTTCCCGGATTGGAATATATGGATCAAACTGCCCT CAGTGGATAGTAGCAATGCAGGCTTGCAATGGTTACAGCTTAATCTGTGTCCCACTCTAC GATACGTTAGGTGCAGGAGCTGTTGACTTCATTATTGACCATGCTGAAATCGATGTTATC TTTGTTCAGGACAAGAAAATAAAAGAAATACTGTCCGCAAATTGCAAGTCTGCTAAGAGA GTGAAAGGACTGGTGGCATTTACTTCGGGAACAAGCGAAGAAATCACAAGTGCTGATCAG ATTGGGATGAAGTTGTACTCGTGGAAAGATTTCTTAAAAATGGGAAAGGAAAATCCAGCC CAACCTTGTGCTCCAAAACCAAATGATACATGCACCATCATGTACACAAGTGGGACAAGT GGAGAGCCCAAAGGTGTCATGCTTAGCCATGAGAGTCATGCCATATATGTGAAAGGTGTG GACCTCTTCATGGAGCAGTTTGACGATAAGATGACAACAGATGATGTGTTTCTTTCCTTT CTACCGCTTGCTCACATCCTTGACCGCATGATCGAGGAGTTTTTCTTTCACAAAGGAGCC TCAGTTGGCTATTATCATGGGGATTTGAATGCCTTGAGAGATGATCTCATGGAGCTAAAG CCAACTCTACTAGTTGGGGTGCCTCGAGTGTATGAAAAAATTTATGAAGGTATCTTGAAG GCCTTATCAGAACTCAGACCACTCAGAAGATTAATTTTCAATGCTCTGTATAACCGCAAA CTGGCAAACATGAAAGCAGGCTGCACGCACAAAACTGCTTCACCTTTTGCAGATATGTTG GCTTTCCGCAAGGTCAAAGCAAGGCTTGGTGGTCGTCTTCGCCTATTAATCTCGGGTGGG GCTCCATTAAGTAATGAGATCGAAGAGTTCTTGAGAGTAACCAGCTGCGCATACTTTATC CAAGGCTATGGTTTAACAGAAACACTGGGACCTAGCACGGTCTGTTACCCTGATGACATG TCCCTGGTTGGAACTGTTGGCGTGGCTGCTACCTATACGGAATTGCGATTGGAAGAAGTG CCTGAGATGGGTTACAATCCACTTGGTACTCCTTCCCGTGGTGAAATATGCGTCCGAGGA AACTTCTTCACCGGATACTATAAAAATCCTGAGCTCACGAATGAGGTCATGGCTGATGGA TGGTTTCACACAGGTGACATTGGAGAGATGAACTCAGATGGAATCCTGAAGGTAATTGAC CGAAAGAAAAATATATTCAAGTTGTCACAAGGGGAGTATGTTGCAGTTGAATACCTGGAG AAAGTATATGTTTTCCCTCCAACCGTTGAAGATGTCTGGGTATATGGGGACAGCTTCAGA TCAATGTTAGTGGCAGTAGTTAATCCACATGAAGAGAACACCATGAAGTGGGCAGAATCA AATGGCTGCAAGGGTTCTTTTGCTGAAATATGCAAGTCTGAAGGCCTTAAAGAGCATATC CTGAAAGAGCTGCAATCTGTTGCAGCAAAGAACAAGCTACGGGGATTTGAGTATGTCAAA GGTGTAATATTGGACCCTATTCCTTTTGACCTTGAAAGGGATTTGGTGACT

Peptide Sequence

PEP ID	Os05t0132100-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:1867386:1871382:-1 gene:Os05g0132100 transcript:Os05t0132100-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain acyl-CoA synthetase 1 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0132100-02);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-03);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-04)
Sequence	LQQLGVKPGSRIGIYGSNCPQWIVAMQACNGYSLICVPLYDTLGAGAVDFIIDHAEIDVI FVQDKKIKEILSANCKSAKRVKGLVAFTSGTSEEITSADQIGMKLYSWKDFLKMGKENPA QPCAPKPNDTCTIMYTSGTSGEPKGVMLSHESHAIYVKGVDLFMEQFDDKMTTDDVFLSF LPLAHILDRMIEEFFFHKGASVGYYHGDLNALRDDLMELKPTLLVGVPRVYEKIYEGILK ALSELRPLRRLIFNALYNRKLANMKAGCTHKTASPFADMLAFRKVKARLGGRLRLLISGG APLSNEIEEFLRVTSCAYFIQGYGLTETLGPSTVCYPDDMSLVGTVGVAATYTELRLEEV PEMGYNPLGTPSRGEICVRGNFFTGYYKNPELTNEVMADGWFHTGDIGEMNSDGILKVID RKKNIFKLSQGEYVAVEYLEKVYVFPPTVEDVWVYGDSFRSMLVAVVNPHEENTMKWAES NGCKGSFAEICKSEGLKEHILKELQSVAAKNKLRGFEYVKGVILDPIPFDLERDLVT

Transcript Sequence

Transcript ID	Os05t0132100-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:1867386:1871382:-1 gene:Os05g0132100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:long-chain acyl-CoA synthetase 1 description:AMP-dependent synthetase and ligase domain containing protein. (Os05t0132100-02);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-03);Similar to cDNA clone:001-200-C01, full insert sequence. (Os05t0132100-04)
Sequence	TTTGCAGCAGCTGGGGGTGAAGCCAGGTTCCCGGATTGGAATATATGGATCAAACTGCCC TCAGTGGATAGTAGCAATGCAGGCTTGCAATGGTTACAGCTTAATCTGTGTCCCACTCTA CGATACGTTAGGTGCAGGAGCTGTTGACTTCATTATTGACCATGCTGAAATCGATGTTAT CTTTGTTCAGGACAAGAAAATAAAAGAAATACTGTCCGCAAATTGCAAGTCTGCTAAGAG AGTGAAAGGACTGGTGGCATTTACTTCGGGAACAAGCGAAGAAATCACAAGTGCTGATCA GATTGGGATGAAGTTGTACTCGTGGAAAGATTTCTTAAAAATGGGAAAGGAAAATCCAGC CCAACCTTGTGCTCCAAAACCAAATGATACATGCACCATCATGTACACAAGTGGGACAAG TGGAGAGCCCAAAGGTGTCATGCTTAGCCATGAGAGTCATGCCATATATGTGAAAGGTGT GGACCTCTTCATGGAGCAGTTTGACGATAAGATGACAACAGATGATGTGTTTCTTTCCTT TCTACCGCTTGCTCACATCCTTGACCGCATGATCGAGGAGTTTTTCTTTCACAAAGGAGC CTCAGTTGGCTATTATCATGGGGATTTGAATGCCTTGAGAGATGATCTCATGGAGCTAAA GCCAACTCTACTAGTTGGGGTGCCTCGAGTGTATGAAAAAATTTATGAAGGTATCTTGAA GGCCTTATCAGAACTCAGACCACTCAGAAGATTAATTTTCAATGCTCTGTATAACCGCAA ACTGGCAAACATGAAAGCAGGCTGCACGCACAAAACTGCTTCACCTTTTGCAGATATGTT GGCTTTCCGCAAGGTCAAAGCAAGGCTTGGTGGTCGTCTTCGCCTATTAATCTCGGGTGG GGCTCCATTAAGTAATGAGATCGAAGAGTTCTTGAGAGTAACCAGCTGCGCATACTTTAT CCAAGGCTATGGTTTAACAGAAACACTGGGACCTAGCACGGTCTGTTACCCTGATGACAT GTCCCTGGTTGGAACTGTTGGCGTGGCTGCTACCTATACGGAATTGCGATTGGAAGAAGT GCCTGAGATGGGTTACAATCCACTTGGTACTCCTTCCCGTGGTGAAATATGCGTCCGAGG AAACTTCTTCACCGGATACTATAAAAATCCTGAGCTCACGAATGAGGTCATGGCTGATGG ATGGTTTCACACAGGTGACATTGGAGAGATGAACTCAGATGGAATCCTGAAGGTAATTGA CCGAAAGAAAAATATATTCAAGTTGTCACAAGGGGAGTATGTTGCAGTTGAATACCTGGA GAAAGTATATGTTTTCCCTCCAACCGTTGAAGATGTCTGGGTATATGGGGACAGCTTCAG ATCAATGTTAGTGGCAGTAGTTAATCCACATGAAGAGAACACCATGAAGTGGGCAGAATC AAATGGCTGCAAGGGTTCTTTTGCTGAAATATGCAAGTCTGAAGGCCTTAAAGAGCATAT CCTGAAAGAGCTGCAATCTGTTGCAGCAAAGAACAAGCTACGGGGATTTGAGTATGTCAA AGGTGTAATATTGGACCCTATTCCTTTTGACCTTGAAAGGGATTTGGTGACT