Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0128100-02
CDS Infomation

cds chromosome:IRGSP-1.0:5:1652029:1654377:1 gene:Os05g0128100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0128100-01);Hypothetical conserved gene. (Os05t0128100-02);Conserved hypothetical protein. (Os05t0128100-03)
Sequence

ATGGAGGCGGCGGCTGCGCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGT
CTCGCGCATGGCGGCGCCGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCG
AGGTGGTCGGGGCGGCGGCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCC
GAGCAGCTGGTCCCCGGCTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATC
AGTGCTCTGATGCTGTTCTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATG
AAGGATTTGCAGGAGCCCAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCA
GCAACCATGTCGGTCGCCGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAG
AAGACAAAGAAGAACAAGAAGGCTGCCATGAAGGTGTAG

Peptide Sequence

PEP ID

Os05t0128100-02
PEP Infomation

pep chromosome:IRGSP-1.0:5:1652029:1654377:1 gene:Os05g0128100 transcript:Os05t0128100-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0128100-01);Hypothetical conserved gene. (Os05t0128100-02);Conserved hypothetical protein. (Os05t0128100-03)
Sequence

MEAAAALTTTTGAQYSCCFGLAHGGAAQRRRRTAAGFGAARWSGRRLRALPPQVSEFLSP
EQLVPGSPADTGDVSSLIPISALMLFFYFVSNWVVPELIMKDLQEPKKAEESEEAASSPA
ATMSVAGDGQPEAKIRLKVKKTKKNKKAAMKV

Transcript Sequence

Transcript ID

Os05t0128100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:1652029:1654377:1 gene:Os05g0128100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os05t0128100-01);Hypothetical conserved gene. (Os05t0128100-02);Conserved hypothetical protein. (Os05t0128100-03)
Sequence

CACTAGCTACTCCAGTCAGCTAATCCCTTCCCGAAAATATCTCGCCGTCGTTGCGCGCGG
TAGCTAGCTAGCTAGCTGCGCCATCGACGACGAAGTCTCATCCATGGAGGCGGCGGCTGC
GCTGACGACGACGACCGGCGCCCAGTACAGCTGCTGCTTCGGTCTCGCGCATGGCGGCGC
CGCACAACGGAGGAGGAGGACGGCGGCGGGTTTCGGGGCGGCGAGGTGGTCGGGGCGGCG
GCTGCGGGCGCTGCCGCCGCAGGTGAGCGAGTTCCTCAGCCCCGAGCAGCTGGTCCCCGG
CTCGCCGGCCGACACCGGCGACGTCTCCTCCCTCATCCCAATCAGTGCTCTGATGCTGTT
CTTCTACTTCGTGTCCAACTGGGTGGTGCCTGAGTTAATCATGAAGGATTTGCAGGAGCC
CAAAAAGGCTGAAGAATCAGAAGAAGCTGCCTCTTCACCGGCAGCAACCATGTCGGTCGC
CGGCGACGGCCAACCTGAAGCTAAAATCAGACTCAAGGTGAAGAAGACAAAGAAGAACAA
GAAGGCTGCCATGAAGGTGTAGTGCACACAAACATGCATCAATATAATGCATGCTAGTAT
GTTATTGCCCCCCTCATGATGATAATAGATAGCATCATCAGTCAAAGATCACACTAAAGT
GCTAATTATAATCAAAGAGAAGATTAATTCTCCATCAGAAGGGGGGGGCTTACATATAGT
ATGTACTCATCATGTTCTGAATCTGTGAGCCATTCAATTGAAAGATAATTATTCCATTGC
ATATTTGCATCTATGCTTAGCTAGCCAGTACTAAGTATCAACAACAGCTAGCACTAGCTA
ATAAAGTTTTGGGAGAAGAATGAAAGGTGGAGAGGGCATTGGTACAAACAGGTGGGGCTT
GTATTGTGGTAGCAGGCAAAAGTGGGCAAATCAGTCGGTTATCAGTGTGGTGGGCTGAAC
TCCACAAAATCCTCTCATCTCATCAACTGGTTGTTGTTGTTGTTGTTGTTGCCATCACAC
ACAACAGCATCAATGGGAAAGCTTAGGCATGCTCAGCTCAAAAGTAGGAAGGGACCAAGG
GCAGGCAGGATCATCAACTTGCAAAGCATGTGTAGGTTTCAGTTTCATGGTTCAATTCAA
CAATCAACACCAAAAACACTTCATGGATCAGAGAGATTTTTTAATACGTGAAAATCGTTC
GTTAGCGCCTTTTTAGGAACAAATTAGGAATGACATAGGATTATTTGAGGAATTTTTTTT
CAGGGTATGGAATTCTAAGAATCTTATGGAGAATTTTATC