Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0126200-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:1497942:1499638:-1 gene:Os05g0126200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0126200-01)
Sequence

ATGGCGCTCCTCCGAGCTCTCCGGCGAGCCCTCCCGCCGCTATCCTCCGCGGCGGCGGGG
GTTCTCCTCCGGGGCGCGACGCGTCATGCTGCTCCTCTCCCCCTTCGTCCCCCGCCTCTT
CTTCGGCTGCTGGATCCGATCGGGCTCCGCCCATTCTCCGCCGCCGCCGCCACCGCGTCG
CAGGCGCCGTCCATGGGGGCCGGCCTCTTCAGCGGGCTCATGGACACCCGGTTCCCGAAG
CGGCGGCCCGGGTTCAAGTCCCGGCGGAAGAGGGCCAGCCTCCGCCCCAAAGGTCCGTAC
TACTGGGTGAAGTGCAAGCCTGGGGAGCCTATCCCGGCGAACCAGCCGAATGAAGGCAGT
GTGCAGGGAAGGAAGGAAAAGAAGAGGATCAAGCAGCGCAAGGCCTTTATCATGGCTGAA
AAAAAGAAGCGCAAAGCACAATATTCTGCTGCTGTTAAGAGAAAGGAAGCAGAAAGGACA
GAAAGGAAGATGGCTGCAGTGGCCAGAGAGCGGGCATGGACTGAAAGGTTGGCTGATCTT
AAACGGATTGAAGAAGAGATGAAACCTGCGACGGCTTAA

Peptide Sequence

PEP ID

Os05t0126200-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:1497942:1499638:-1 gene:Os05g0126200 transcript:Os05t0126200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0126200-01)
Sequence

MALLRALRRALPPLSSAAAGVLLRGATRHAAPLPLRPPPLLRLLDPIGLRPFSAAAATAS
QAPSMGAGLFSGLMDTRFPKRRPGFKSRRKRASLRPKGPYYWVKCKPGEPIPANQPNEGS
VQGRKEKKRIKQRKAFIMAEKKKRKAQYSAAVKRKEAERTERKMAAVARERAWTERLADL
KRIEEEMKPATA

Transcript Sequence

Transcript ID

Os05t0126200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:1497942:1499638:-1 gene:Os05g0126200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0126200-01)
Sequence

AGAACCTTTTCTCCCATGGCGCTCCTCCGAGCTCTCCGGCGAGCCCTCCCGCCGCTATCC
TCCGCGGCGGCGGGGGTTCTCCTCCGGGGCGCGACGCGTCATGCTGCTCCTCTCCCCCTT
CGTCCCCCGCCTCTTCTTCGGCTGCTGGATCCGATCGGGCTCCGCCCATTCTCCGCCGCC
GCCGCCACCGCGTCGCAGGCGCCGTCCATGGGGGCCGGCCTCTTCAGCGGGCTCATGGAC
ACCCGGTTCCCGAAGCGGCGGCCCGGGTTCAAGTCCCGGCGGAAGAGGGCCAGCCTCCGC
CCCAAAGGTCCGTACTACTGGGTGAAGTGCAAGCCTGGGGAGCCTATCCCGGCGAACCAG
CCGAATGAAGGCAGTGTGCAGGGAAGGAAGGAAAAGAAGAGGATCAAGCAGCGCAAGGCC
TTTATCATGGCTGAAAAAAAGAAGCGCAAAGCACAATATTCTGCTGCTGTTAAGAGAAAG
GAAGCAGAAAGGACAGAAAGGAAGATGGCTGCAGTGGCCAGAGAGCGGGCATGGACTGAA
AGGTTGGCTGATCTTAAACGGATTGAAGAAGAGATGAAACCTGCGACGGCTTAAGTAGCT
CCCTCGAAAATGGCAAGAAATCTAACCCGCTTCTTCTGCTGCGTTTTGTCCCTGTTATTT
TGGATGACATATATGTTCTGTGCTATTCATGGATGTAAAAATCCTTTGATGGGACATTAG
TTGTACCGCTTCTATCAACAGTATTCTCAAATTTTTGTTCCCTGTATTGGAGTATCTGTT
CTATGTTGTATCTAAAATAAAAGATGTGATTTTCGTTTTGTGCCAGAGGCCAGGAATGGC
CAACATGGCAACATCTGC