Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0124600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:1397305:1404503:-1 gene:Os05g0124600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os05t0124600-01)
Sequence	ATGCCAATGCAAACTCTCGACAAAACCAATGCTGTGAAAGCTGTTCATTCTGAAGATAAT GGTGAAAGAACAGATATATCAGAGTCATCAGATGCAGTTGAGTGGGACCCATGGGACCCC CCGGATCCTCCTCGTCCTCCTTTTCCACCCACAGCAGACTTTACGAGCAAGGTTCAATTG ATCAAACAGTATGGATTTCAAGTACGGGCTGCACTTGCTGCCTCCAGGTCCACAAATATA ATTGCCCCAGACCGTACTCCTCAGGAGGTGCTCTTTAAATTTTGTCAAATATCCAGTGAA CTGGGTCTCATCCTTAAAAGAGATAGTGTTCGGAGCTTCCTCAGACTGTATGGGGAAAAT TTGGATTGCATGGCTTGGGGTTTGATCATCACCCCTCAAACATTCGACTTCATTGTTGCA CACAATGCCCTGCGTTGTGCTAAGGTTGTTTTAGAGGGCAAGGCGCCTAAGCTCTACGAG ATGCGTGCCAACCCCAACTGCATGAGTAACTATGGGTACTTCCCCCTCCATCAAGCTGCT GAAACTTTCTCTGTTGACATGATTAAGTTGCTGCTTCGCTATGGTGCATCGGCGAATTTA CGCACATCGGGCCAAAAGGTCATCGAGGGCCTCCTCCCACTCCATGTTGCCATTGAGAAC ACTTGCATGCACAAGTATCTTGAGGACAATCTATTAACTGACCAGAAGCACAAACAAGTG GATTTTGACTTCATCTACAAGCTTGTCCATCTGCTTTGTCTGCCTGAGATGAAGATCTTC TTGGACACGACCAGACTGCTTGCAGACTACACAGATAATGTTCTTGATGAACTATGGAAT TACATTAAGGAGGGAAAGCTTGTCCATGCAGCTATTTTGCTCCTTGCAGCTCAACGGAAA ATTCGTACATGTGCTTCCTCTAAGAGAAACACCAACCATAACCTGAGTGGGTTTGATATT ATCAAGGATCGTATTACGGGATCCATCATTTCCATAGAAACAGAAGGGCCTGGACTAACA GGTGGTAAAAATAGCAAGGCACGTAAACAGCAGGATGATATGCGAATGTTTTTTCGTAAT GCATTGGTGCTTAATTCTATGATTTCTGAAGCTGGTGAAGCTCTTGATGAATATATCCAG ACTCATTCAGAGGTATCTCACCGGGGTGTCCTTGGAAATATTTCATCAATTCTCAAGGAT CATGGCGTTGCTCCTACTGGAAAAGGAATTAACATAGGAGACCTGAAATGCTGTCCCTAT GACTGCGAAGAGTCAGATAGTGTGCTAAAGTGCAAACATGATTCTGGCATGACCAAGGCA TCTGGAGAATCGCCTAATCGGAATGTTGAAGCTAAAAATGCTGTTGGAAATAAATTACCA AGTAGACAAGAACTTGAACAAACAAGGAATATGTTCTTCCCATATTGGAGATCAGTGTTA ACATCTCGCTTTACTGTAAAACTCTTCCCATCCTATGCGCCCATGGATGACTGTCAGCCA TCTCTTCCAAAGCTTTATATGGCCGGTGGTTCTGGAAATAAACTGAAGGATAAAGGGTCT TTTCCAGTTGATGTTGGTTTGTTGGGAAAAACCCCACAACTAACAAGCATCCATCAGTCC AGAAGGCTATTTGGCACTGCTGCATTTACACTACTGAAGATGTTAAAGAAGCGTGCATGA

Peptide Sequence

PEP ID	Os05t0124600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:1397305:1404503:-1 gene:Os05g0124600 transcript:Os05t0124600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os05t0124600-01)
Sequence	MPMQTLDKTNAVKAVHSEDNGERTDISESSDAVEWDPWDPPDPPRPPFPPTADFTSKVQL IKQYGFQVRAALAASRSTNIIAPDRTPQEVLFKFCQISSELGLILKRDSVRSFLRLYGEN LDCMAWGLIITPQTFDFIVAHNALRCAKVVLEGKAPKLYEMRANPNCMSNYGYFPLHQAA ETFSVDMIKLLLRYGASANLRTSGQKVIEGLLPLHVAIENTCMHKYLEDNLLTDQKHKQV DFDFIYKLVHLLCLPEMKIFLDTTRLLADYTDNVLDELWNYIKEGKLVHAAILLLAAQRK IRTCASSKRNTNHNLSGFDIIKDRITGSIISIETEGPGLTGGKNSKARKQQDDMRMFFRN ALVLNSMISEAGEALDEYIQTHSEVSHRGVLGNISSILKDHGVAPTGKGINIGDLKCCPY DCEESDSVLKCKHDSGMTKASGESPNRNVEAKNAVGNKLPSRQELEQTRNMFFPYWRSVL TSRFTVKLFPSYAPMDDCQPSLPKLYMAGGSGNKLKDKGSFPVDVGLLGKTPQLTSIHQS RRLFGTAAFTLLKMLKKRA

Transcript Sequence

Transcript ID	Os05t0124600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:1397305:1404503:-1 gene:Os05g0124600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ankyrin repeat domain containing protein. (Os05t0124600-01)
Sequence	TCGGTCTCTTCGTTCGTTCGTCGTCAGTGGCGATTCCCCCTCCCTCCGGCCGCCAAAGGT CAGTGACGATTTCCCTCCCTTCTCTCCCTCTCCTCTGCCATCGTCCCCGCCGACGATCCG TGCACGCCACGGCCCAACACATACGGCCAAACCCTAGCAATGCCAATGCAAACTCTCGAC AAAACCAATGCTGTGAAAGCTGTTCATTCTGAAGATAATGGTGAAAGAACAGATATATCA GAGTCATCAGATGCAGTTGAGTGGGACCCATGGGACCCCCCGGATCCTCCTCGTCCTCCT TTTCCACCCACAGCAGACTTTACGAGCAAGGTTCAATTGATCAAACAGTATGGATTTCAA GTACGGGCTGCACTTGCTGCCTCCAGGTCCACAAATATAATTGCCCCAGACCGTACTCCT CAGGAGGTGCTCTTTAAATTTTGTCAAATATCCAGTGAACTGGGTCTCATCCTTAAAAGA GATAGTGTTCGGAGCTTCCTCAGACTGTATGGGGAAAATTTGGATTGCATGGCTTGGGGT TTGATCATCACCCCTCAAACATTCGACTTCATTGTTGCACACAATGCCCTGCGTTGTGCT AAGGTTGTTTTAGAGGGCAAGGCGCCTAAGCTCTACGAGATGCGTGCCAACCCCAACTGC ATGAGTAACTATGGGTACTTCCCCCTCCATCAAGCTGCTGAAACTTTCTCTGTTGACATG ATTAAGTTGCTGCTTCGCTATGGTGCATCGGCGAATTTACGCACATCGGGCCAAAAGGTC ATCGAGGGCCTCCTCCCACTCCATGTTGCCATTGAGAACACTTGCATGCACAAGTATCTT GAGGACAATCTATTAACTGACCAGAAGCACAAACAAGTGGATTTTGACTTCATCTACAAG CTTGTCCATCTGCTTTGTCTGCCTGAGATGAAGATCTTCTTGGACACGACCAGACTGCTT GCAGACTACACAGATAATGTTCTTGATGAACTATGGAATTACATTAAGGAGGGAAAGCTT GTCCATGCAGCTATTTTGCTCCTTGCAGCTCAACGGAAAATTCGTACATGTGCTTCCTCT AAGAGAAACACCAACCATAACCTGAGTGGGTTTGATATTATCAAGGATCGTATTACGGGA TCCATCATTTCCATAGAAACAGAAGGGCCTGGACTAACAGGTGGTAAAAATAGCAAGGCA CGTAAACAGCAGGATGATATGCGAATGTTTTTTCGTAATGCATTGGTGCTTAATTCTATG ATTTCTGAAGCTGGTGAAGCTCTTGATGAATATATCCAGACTCATTCAGAGGTATCTCAC CGGGGTGTCCTTGGAAATATTTCATCAATTCTCAAGGATCATGGCGTTGCTCCTACTGGA AAAGGAATTAACATAGGAGACCTGAAATGCTGTCCCTATGACTGCGAAGAGTCAGATAGT GTGCTAAAGTGCAAACATGATTCTGGCATGACCAAGGCATCTGGAGAATCGCCTAATCGG AATGTTGAAGCTAAAAATGCTGTTGGAAATAAATTACCAAGTAGACAAGAACTTGAACAA ACAAGGAATATGTTCTTCCCATATTGGAGATCAGTGTTAACATCTCGCTTTACTGTAAAA CTCTTCCCATCCTATGCGCCCATGGATGACTGTCAGCCATCTCTTCCAAAGCTTTATATG GCCGGTGGTTCTGGAAATAAACTGAAGGATAAAGGGTCTTTTCCAGTTGATGTTGGTTTG TTGGGAAAAACCCCACAACTAACAAGCATCCATCAGTCCAGAAGGCTATTTGGCACTGCT GCATTTACACTACTGAAGATGTTAAAGAAGCGTGCATGAGATGGCAGGTGCTCCCCTGAA TATTGTTGTGGAGCACAACCATTTCCCCTACGTCAAGATAGTCATTTCTGCCCTTAATTC GCTTGGCTTGGTTTTGTGCTGGATATGCCGTTCTGGCATAGACCTGATAACATGTACGAT GGCATGTCTAGCTTGAAGCTTCAAGACGAGGACTGCCACCACCTGTTGGTTGCGACTTCA CGGCGGCGGTGTGGAGAATTATCAGAAAGAAGATGGTGCAATGCTAGCTTCCAAACTCCG GCAGATGAGGAGAACACACTGGCTGACTGGTGGTTGGCAACAAGACGCTGTTTCCGGACA AGCTACAGAACGGATTTTGATAGTGCATTCATGCTAATTTGTTGGTTGATTTGGAAGGAG CGTAATGCAAAAATTTTCCAACACGTGTCCAAAACGCTGGATCAACTGGCGGAGGATATT AAAGAGGAAATTGCTGTCTGGGGGGTGGCTGGGATTTTCTCCCAATTTCGCGAGTAATTG CCATGACTATCTGCGGGGTTTAGCCCTGCTTTCTTTTCTCGTTCTTGGTTGGATGGGGTC CTTCACTGGCTACCGCGGTATTGTAATGTCATTGTAACATTTTACTGTATTTCCTCCAAA TCTTAATGAAATTGGTTGGCAAACCTCTCT