Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0123200-03
CDS Infomation	cds chromosome:IRGSP-1.0:5:1291892:1295432:1 gene:Os05g0123200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to IQD1. (Os05t0123200-01);IQ calmodulin-binding region domain containing protein. (Os05t0123200-02);Similar to IQD1. (Os05t0123200-03)
Sequence	ATGGGGAAGAAGGGGAAGTGGTTTGGAGCTGTCAAGAAGGTGTTCAGCCCTGAATCCAAG GAGAAGAAGGAGGAGAGACTGAGGAGAAAATTAGCAGCTAGTAACCCGAACCCGCCAGAT CTAACCCCTTCGGCTTCTCTGGAAGTCAATGTTTCGGTGCCACCCCCTCCACCTCCTCCA CCTGTTCAACAGATTGAAGAGGTTAAGGTCCCTGAAGTTGAGCAGGAGCAAAGCAAACAT GTCACTGTGGAGGCTGTACCTGAGGCTGTCCCCGTACCCGCACAGACATCGTCATTGCCA CCTGGTGTATCAAGGGAAGAGCAAGCTACAATCAAGATCCAGACCGCCTTCCGAGGTTAC CTGGCAAGGAGGGCATTACGAGCTCTGCGGGGACTTGTCAGATTGAAGTCACTGGTTGAG GGTAACTCGGTTAAGCGTCAAGCTGCAAGCACTCTGCGTTGCATGCAGACTCTAGCACGG GTGCAGTCGCAGATACGTTCAAGGAGGCTGAAAATGTCAGAGGAGAACCAGGCCCTCCAG CGCCAGCTTCTGCTGAAACAGGAGCTGGAGAGTTTGAGGATGGGGGAGCAGTGGGATGAC AGCACTCAGTCTAAGGAACAAATTGAGGCGAGTCTTATAAGCAGGCAAGAGGCTGCAGTA AGAAGGGAGAGGGCGCTCGCATATGCATTTTCACATCAGTGGAAGAGCACTTCAAGGTCA GTCAACCCAATGTTTGTAGACCCTAACAACCCACAATGGGGATGGAGCTGGTTGGAACGC TGGATGGCAGCAAAGCCTTGGGAGGGGCGTGCTGGGACCGACAAGGAGAGCAACCTTGAC CGTGCATCAGCGAAGAGTGCAAGCTTGAATCTTGGAGAGGGTGAGATCACAAAAGCCTTC AACCGTAGGGGATCCAAGCCAGACAAGTCATCACCAACAACTCCAAAGCTGACCCGTCCA GCCTCCCGTCAATCCCCTTCAACTCCCTCCGCTAAAGTGTCACCGATCTTTGCAAAGAAG AAATCCGCGACACCGAAGAATGGGCTCTCACAGGTTGATGACGACGCGAAGAGTGTGTTC AGTGTCCAGTCTGAACGACCGAGGAGGCACAGTATAGCCACGTCAACCGTGCGTGACGAC GAGAGCCTCGCAAGCTCCCCATCTGTGCCAAGCTACATGGCTCCCACAAAATCTGCAAGA GCTAAGTTGCGCCTCCAAGGATCTGCAGTGACCGATGGTGCAGAGACACCACCGGAGAAA GTAGCCTCTGTTGGTTCAGTGAAGAAGAAGCTGTCCTTCCAAGCTGGAATGGCGCCGCCT TCTCCGATGAGGCGGCATTCGGGCCCTCCCAAGGTGGAGGTGGTGAAGGACATTGCTGAG CCACCACAGCCAGAGGCCTTGGTGATCAATGGTGGAAGCAAGTGA

Peptide Sequence

PEP ID	Os05t0123200-03
PEP Infomation	pep chromosome:IRGSP-1.0:5:1291892:1295432:1 gene:Os05g0123200 transcript:Os05t0123200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to IQD1. (Os05t0123200-01);IQ calmodulin-binding region domain containing protein. (Os05t0123200-02);Similar to IQD1. (Os05t0123200-03)
Sequence	MGKKGKWFGAVKKVFSPESKEKKEERLRRKLAASNPNPPDLTPSASLEVNVSVPPPPPPP PVQQIEEVKVPEVEQEQSKHVTVEAVPEAVPVPAQTSSLPPGVSREEQATIKIQTAFRGY LARRALRALRGLVRLKSLVEGNSVKRQAASTLRCMQTLARVQSQIRSRRLKMSEENQALQ RQLLLKQELESLRMGEQWDDSTQSKEQIEASLISRQEAAVRRERALAYAFSHQWKSTSRS VNPMFVDPNNPQWGWSWLERWMAAKPWEGRAGTDKESNLDRASAKSASLNLGEGEITKAF NRRGSKPDKSSPTTPKLTRPASRQSPSTPSAKVSPIFAKKKSATPKNGLSQVDDDAKSVF SVQSERPRRHSIATSTVRDDESLASSPSVPSYMAPTKSARAKLRLQGSAVTDGAETPPEK VASVGSVKKKLSFQAGMAPPSPMRRHSGPPKVEVVKDIAEPPQPEALVINGGSK

Transcript Sequence

Transcript ID	Os05t0123200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:1291892:1295432:1 gene:Os05g0123200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to IQD1. (Os05t0123200-01);IQ calmodulin-binding region domain containing protein. (Os05t0123200-02);Similar to IQD1. (Os05t0123200-03)
Sequence	AAAGGGGGGATTATTTGGCCCTCTTTCTCTTTCCTTTCGCAGGAAGATTTGGTGATTCTT CTTCTGAGGGCTCCTCTAAGGATTTGGGAGGATGGGGAAGAAGGGGAAGTGGTTTGGAGC TGTCAAGAAGGTGTTCAGCCCTGAATCCAAGGAGAAGAAGGAGGAGAGACTGAGGAGAAA ATTAGCAGCTAGTAACCCGAACCCGCCAGATCTAACCCCTTCGGCTTCTCTGGAAGTCAA TGTTTCGGTGCCACCCCCTCCACCTCCTCCACCTGTTCAACAGATTGAAGAGGTTAAGGT CCCTGAAGTTGAGCAGGAGCAAAGCAAACATGTCACTGTGGAGGCTGTACCTGAGGCTGT CCCCGTACCCGCACAGACATCGTCATTGCCACCTGGTGTATCAAGGGAAGAGCAAGCTAC AATCAAGATCCAGACCGCCTTCCGAGGTTACCTGGCAAGGAGGGCATTACGAGCTCTGCG GGGACTTGTCAGATTGAAGTCACTGGTTGAGGGTAACTCGGTTAAGCGTCAAGCTGCAAG CACTCTGCGTTGCATGCAGACTCTAGCACGGGTGCAGTCGCAGATACGTTCAAGGAGGCT GAAAATGTCAGAGGAGAACCAGGCCCTCCAGCGCCAGCTTCTGCTGAAACAGGAGCTGGA GAGTTTGAGGATGGGGGAGCAGTGGGATGACAGCACTCAGTCTAAGGAACAAATTGAGGC GAGTCTTATAAGCAGGCAAGAGGCTGCAGTAAGAAGGGAGAGGGCGCTCGCATATGCATT TTCACATCAGTGGAAGAGCACTTCAAGGTCAGTCAACCCAATGTTTGTAGACCCTAACAA CCCACAATGGGGATGGAGCTGGTTGGAACGCTGGATGGCAGCAAAGCCTTGGGAGGGGCG TGCTGGGACCGACAAGGAGAGCAACCTTGACCGTGCATCAGCGAAGAGTGCAAGCTTGAA TCTTGGAGAGGGTGAGATCACAAAAGCCTTCAACCGTAGGGGATCCAAGCCAGACAAGTC ATCACCAACAACTCCAAAGCTGACCCGTCCAGCCTCCCGTCAATCCCCTTCAACTCCCTC CGCTAAAGTGTCACCGATCTTTGCAAAGAAGAAATCCGCGACACCGAAGAATGGGCTCTC ACAGGTTGATGACGACGCGAAGAGTGTGTTCAGTGTCCAGTCTGAACGACCGAGGAGGCA CAGTATAGCCACGTCAACCGTGCGTGACGACGAGAGCCTCGCAAGCTCCCCATCTGTGCC AAGCTACATGGCTCCCACAAAATCTGCAAGAGCTAAGTTGCGCCTCCAAGGATCTGCAGT GACCGATGGTGCAGAGACACCACCGGAGAAAGTAGCCTCTGTTGGTTCAGTGAAGAAGAA GCTGTCCTTCCAAGCTGGAATGGCGCCGCCTTCTCCGATGAGGCGGCATTCGGGCCCTCC CAAGGTGGAGGTGGTGAAGGACATTGCTGAGCCACCACAGCCAGAGGCCTTGGTGATCAA TGGTGGAAGCAAGTGACTCATATGACAAGTACCAGGAGGGAGCAATGGATTCTGCAGATA TATTTCATCCAATGAACAAAGGTTTAAGATTATATATCAGCTGTATGAGTTGCCGGCATT GTTTTTCCAGTTATAACCACATTATTTGCTCTAGCAGATTCGCAAGTACCCTGCCAGTCG ATTCCATTTGTTGTTTCTGTAAAACTATATCGATTTGTCACTTGAAACCTTTGGTGTTTG TATGT