Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0121800-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:1195081:1199226:1 gene:Os05g0121800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0121800-01)
Sequence

ATGGAGGCGCTCTCGCTCATCGACGTGGCCGCGGAGGACGACCTCCTGCTCGACCTCACC
TCGCCCCCGCCGCTGCATCCCGATCCGCCCCACGCAGGGTGTGATGAGGTGATGGCCGCC
GAGGCTTCTCGCCTGGATCCCGCCGGCGATTCTCCGGAGATGAGGCGGGTTGTGGATCCG
GATGGCGCTACGGAGGAGGCCCCTGAGCAGTCGGAGTCTCCGAAGCGGAGGAAAGCGAAG
GCCGGCGTTAATCTCCGCAAGAGCTTGGCTTGGGACAGCGCCTTCTTCACCAGCGAAGGT
GTTCTGGATACTGAGGAATTGGCTGTTGTAAACAGCACATTCCGCAAGGCACAGGGTTCC
AGGTTGCCTGGAATCGCTGAGGAAATGAGGAGGTCAGGGGAGTCAACAACTTCGACTCTT
GAAAGCGAAAGCTGGGTGATGGAAAATCTGGAGACTGAGCTGTTTGACAACGTCCGTGCT
TCGATCCAGAGATCGCACGGCAATCCTGGAAAAGCCCCAGGTGTTACTGCTGTTATCTCA
AAACCCCCGAAGTCCAAGGCAAATGTTCCTCGTGTTGCAGCAAGGAAGGGGGTTGATCTG
ATGCCTCAGAGTAAGATAAGGGCCCCTATTTCCACAAGCCAGGGTGCTGCTGGAGGAAAA
CAAAGGATCCAAGCTACCTTGAAAGAGCCTACAACTGCAAGAGTGCCTATTTCAGGATCT
ACAGAAGTAAAACCATCTTTGAAACCTCCGAGGGCTCTACCAAGAGTTGCTACAATGAGA
GCGCCAACTAATACAGCTGTGGCTTCTGGAATTCCAGACAAAAGGAGCAGCACTGGAGGT
GTGGTCAACAGGCAGACAGTTGGTAAATCTGTCAACAATTCAGTTAGCGCACATTCTAGG
CCTGGTGGAGTGACAAAATCTACTTCAACTTCAAAATCAGGTGCCTTACCATCATCATTA
TCATCATCAGCAGCAGCAACAGCAGCTTCAATTGGTAATATGCTAGGTCAAAAACCTAAA
TCATCAACCCTAAGCAACAAGAGCAGAATTGCTCAAAGGATTCCTGTTCGTTCAACGTCA
AGGACTGATGTCAACAAAGCTAACCCAGCAAGAGCATCGAGAAATAATATTCCAACTGGG
GGCAAAAGTAATCGTGTATCTCCAAGCATTTCGCCTAGCAGTTCTGTGGACAGCTTGAGT
TCTGTGGTTTCTGGGGCTTCAACAGCTTCCACTGTAGGGAAGATGAGCCATACATCTGAG
AGCTTCAGTACACGGTCTTCTTCATTATCCCCTTCCCTCAGAAATAGCAATGACCACGCT
CCAACAAGAGCAGATGCAGACACCCAGGGAAAAGGTTCCAAACCATCTGGTCTGCGTATG
CCTACACCCAAAATTGGTTACTTTGATGCTTCCATCGACCAACAGATTGGTGCACATATG
CAAGTGCAGCCCATGAAGATCCAGTGTTCACCTCAGCTATCTTCTGCTCAAATGGGGGAC
CCAGCATCGTCTATCTTGAGTCAGCCGGAATCGAGACTCGCAGCCTCACCTCATGAGAAA
AAAAGCAGTGTCCAGAGCAAGGCATCACCTTTACTCCCCCTTGAAGTTGTACAGATAGAA
CTTGAGCCTTCCCAGGCGATGGAACATGAAGTGTGCACACCCCAGCCCTGCCCAGTGGTA
GCAGCAGCAGCAGCAGCAGCAGCAGACACAGCAAAGGAGAACATTCCGGCTCTGCATCAG
AACATCCAGCCAAATGATGGCGCTGGTTCGTTAGCAGTTGATCTGATTTGCCAGAGATTG
TCCACCATTTCTCTTGGGGACGCCACCGACCTGGCCTCTTGA

Peptide Sequence

PEP ID

Os05t0121800-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:1195081:1199226:1 gene:Os05g0121800 transcript:Os05t0121800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0121800-01)
Sequence

MEALSLIDVAAEDDLLLDLTSPPPLHPDPPHAGCDEVMAAEASRLDPAGDSPEMRRVVDP
DGATEEAPEQSESPKRRKAKAGVNLRKSLAWDSAFFTSEGVLDTEELAVVNSTFRKAQGS
RLPGIAEEMRRSGESTTSTLESESWVMENLETELFDNVRASIQRSHGNPGKAPGVTAVIS
KPPKSKANVPRVAARKGVDLMPQSKIRAPISTSQGAAGGKQRIQATLKEPTTARVPISGS
TEVKPSLKPPRALPRVATMRAPTNTAVASGIPDKRSSTGGVVNRQTVGKSVNNSVSAHSR
PGGVTKSTSTSKSGALPSSLSSSAAATAASIGNMLGQKPKSSTLSNKSRIAQRIPVRSTS
RTDVNKANPARASRNNIPTGGKSNRVSPSISPSSSVDSLSSVVSGASTASTVGKMSHTSE
SFSTRSSSLSPSLRNSNDHAPTRADADTQGKGSKPSGLRMPTPKIGYFDASIDQQIGAHM
QVQPMKIQCSPQLSSAQMGDPASSILSQPESRLAASPHEKKSSVQSKASPLLPLEVVQIE
LEPSQAMEHEVCTPQPCPVVAAAAAAAADTAKENIPALHQNIQPNDGAGSLAVDLICQRL
STISLGDATDLAS

Transcript Sequence

Transcript ID

Os05t0121800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:1195081:1199226:1 gene:Os05g0121800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os05t0121800-01)
Sequence

AACGTCTCTCTCCCCAGCTCGCCGCCGCCGCCTCTCCCCCACCCCGCGGCGATCTAGGGT
TTGGACCCCCGCCTCCGCCGCCGCCGTCGCTGTCTCCCGCGCCCGGCCGGACGGCCTCCC
CTCCCTCCCTCTCATGGAGGCGCTCTCGCTCATCGACGTGGCCGCGGAGGACGACCTCCT
GCTCGACCTCACCTCGCCCCCGCCGCTGCATCCCGATCCGCCCCACGCAGGGTGTGATGA
GGTGATGGCCGCCGAGGCTTCTCGCCTGGATCCCGCCGGCGATTCTCCGGAGATGAGGCG
GGTTGTGGATCCGGATGGCGCTACGGAGGAGGCCCCTGAGCAGTCGGAGTCTCCGAAGCG
GAGGAAAGCGAAGGCCGGCGTTAATCTCCGCAAGAGCTTGGCTTGGGACAGCGCCTTCTT
CACCAGCGAAGGTGTTCTGGATACTGAGGAATTGGCTGTTGTAAACAGCACATTCCGCAA
GGCACAGGGTTCCAGGTTGCCTGGAATCGCTGAGGAAATGAGGAGGTCAGGGGAGTCAAC
AACTTCGACTCTTGAAAGCGAAAGCTGGGTGATGGAAAATCTGGAGACTGAGCTGTTTGA
CAACGTCCGTGCTTCGATCCAGAGATCGCACGGCAATCCTGGAAAAGCCCCAGGTGTTAC
TGCTGTTATCTCAAAACCCCCGAAGTCCAAGGCAAATGTTCCTCGTGTTGCAGCAAGGAA
GGGGGTTGATCTGATGCCTCAGAGTAAGATAAGGGCCCCTATTTCCACAAGCCAGGGTGC
TGCTGGAGGAAAACAAAGGATCCAAGCTACCTTGAAAGAGCCTACAACTGCAAGAGTGCC
TATTTCAGGATCTACAGAAGTAAAACCATCTTTGAAACCTCCGAGGGCTCTACCAAGAGT
TGCTACAATGAGAGCGCCAACTAATACAGCTGTGGCTTCTGGAATTCCAGACAAAAGGAG
CAGCACTGGAGGTGTGGTCAACAGGCAGACAGTTGGTAAATCTGTCAACAATTCAGTTAG
CGCACATTCTAGGCCTGGTGGAGTGACAAAATCTACTTCAACTTCAAAATCAGGTGCCTT
ACCATCATCATTATCATCATCAGCAGCAGCAACAGCAGCTTCAATTGGTAATATGCTAGG
TCAAAAACCTAAATCATCAACCCTAAGCAACAAGAGCAGAATTGCTCAAAGGATTCCTGT
TCGTTCAACGTCAAGGACTGATGTCAACAAAGCTAACCCAGCAAGAGCATCGAGAAATAA
TATTCCAACTGGGGGCAAAAGTAATCGTGTATCTCCAAGCATTTCGCCTAGCAGTTCTGT
GGACAGCTTGAGTTCTGTGGTTTCTGGGGCTTCAACAGCTTCCACTGTAGGGAAGATGAG
CCATACATCTGAGAGCTTCAGTACACGGTCTTCTTCATTATCCCCTTCCCTCAGAAATAG
CAATGACCACGCTCCAACAAGAGCAGATGCAGACACCCAGGGAAAAGGTTCCAAACCATC
TGGTCTGCGTATGCCTACACCCAAAATTGGTTACTTTGATGCTTCCATCGACCAACAGAT
TGGTGCACATATGCAAGTGCAGCCCATGAAGATCCAGTGTTCACCTCAGCTATCTTCTGC
TCAAATGGGGGACCCAGCATCGTCTATCTTGAGTCAGCCGGAATCGAGACTCGCAGCCTC
ACCTCATGAGAAAAAAAGCAGTGTCCAGAGCAAGGCATCACCTTTACTCCCCCTTGAAGT
TGTACAGATAGAACTTGAGCCTTCCCAGGCGATGGAACATGAAGTGTGCACACCCCAGCC
CTGCCCAGTGGTAGCAGCAGCAGCAGCAGCAGCAGCAGACACAGCAAAGGAGAACATTCC
GGCTCTGCATCAGAACATCCAGCCAAATGATGGCGCTGGTTCGTTAGCAGTTGATCTGAT
TTGCCAGAGATTGTCCACCATTTCTCTTGGGGACGCCACCGACCTGGCCTCTTGATCTTG
TAGAGGGATTTAGTCGTATGGTATGCTGGTTGTTTCTGATACATCCTTATTATTGGAAGG
CAATTGCAGCTGAAGTTCTTTCTCTGGCATGTGTTGTTTTAACTCTTATGTCTTGAGTGT
AAAATCCTTTTTCTGTACATCGCATGCCATGATAAGGATTTCGCTCTCGGTTGTAATCAG
ATTGCAGAACACTTAAGAGAGTTGACACTGCTATGTCAACTACAGGTTTGCAAGTAATCG
TATATCAGTCACATTTGTTC