Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0121700-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:1174481:1190593:-1 gene:Os05g0121700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51B description:DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-01);DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-02)
Sequence	ATGGCGAACAAGCTGGTCTCGGAGATGCGGCTACCTCCCCACCTCGCCCACATCCTCGCC GCGCGCCGCCTCACCACCGCCAAGGACGTGCTGTCGCTGCCGGAGGTGGAGCTCATGGGC GTCCTCGACGCCGGCATCCACACCGCCCGCGCCGCCGTCGCCCACGTCAGCGAGATCGCC TGCCCTCCGTACCAAACGGCGCTTGCGCTCCTCGAGGCCTTCAGGGCAAGAGGAGATGGG CGGCTGGCCACCACGCTCCGCGGATTGGATGAGGCATTGCATGGAGGAATCCCCGCAGGG AAGCTCACTGAGGTCGTTGGGCCCTCGGGGATTGGCAAGACCCAGTTCTGTCTGAAGCTT GCTTTGCTAGCAACATTACCAGAATGCTATGGAGGCTTAAATGGTCGAGTTTTGTATATT GATACTGAATCCAAATTCTCTTCACGGAGGATGATCGAGATTGGTGAGAAAAGCTTTCCT CAAATATTTCGTCAAGAAGGCTTGGCCCAAAAGATGGCTGGGAGGATCCTAGTCCTGCGC CCAACATCATTATCTGAATTTACCAAGAGTTTGGAACAGATGAAGGTGACTCTTCTTCAG CATGATGTGAAGCTACTTGTTGTTGATAGCATGGCTGCTCTTATGTCATCTGAGATTGAG AAAAGCGCAACAGGTCTCAGACAACACCCTCTAAGATGGGCCCTTTCATTTCTTAAATCT ATAGCAGAGTTCTCACAGATTCCTGTTGTTGTTACAAACCAAGTACGCAGCCAAAGTAAT GATGATGGCTATCGTTATTCATTTGAAGTTGAGAAGAAATACGATAGTAATAATGCTGAA GGCTTTGAATCTCATCTTGTTGCTGCTCTAGGAATCCAGTGGGCTCATGCTGTAACTATA CGTCTAGTCTTTGAGGCTCACTCAGGTCACAGGTACATCAAGGTAGCTAAATCCCCTATG ACTCCAGCGGTAGCTTTTCCCTTTACTGTGGAGTCATCAGGAATAATATTACTTAGTGAT GAGGGCATTGATGTGCCATCTCCTGAAATAACCTCAATCCGTTGTCAAGGAGAAAATGTC CTGGCTCAATGA

Peptide Sequence

PEP ID	Os05t0121700-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:1174481:1190593:-1 gene:Os05g0121700 transcript:Os05t0121700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51B description:DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-01);DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-02)
Sequence	MANKLVSEMRLPPHLAHILAARRLTTAKDVLSLPEVELMGVLDAGIHTARAAVAHVSEIA CPPYQTALALLEAFRARGDGRLATTLRGLDEALHGGIPAGKLTEVVGPSGIGKTQFCLKL ALLATLPECYGGLNGRVLYIDTESKFSSRRMIEIGEKSFPQIFRQEGLAQKMAGRILVLR PTSLSEFTKSLEQMKVTLLQHDVKLLVVDSMAALMSSEIEKSATGLRQHPLRWALSFLKS IAEFSQIPVVVTNQVRSQSNDDGYRYSFEVEKKYDSNNAEGFESHLVAALGIQWAHAVTI RLVFEAHSGHRYIKVAKSPMTPAVAFPFTVESSGIILLSDEGIDVPSPEITSIRCQGENV LAQ

Transcript Sequence

Transcript ID	Os05t0121700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:1174481:1190593:-1 gene:Os05g0121700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DNA REPAIR PROTEIN RAD51B description:DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-01);DNA repair and recombination, RecA-like domain containing protein. (Os05t0121700-02)
Sequence	ATCTCTCTCTCCCCCCACACAACCCATCGGCGGTGATCGCCATGGCGAACAAGCTGGTCT CGGAGATGCGGCTACCTCCCCACCTCGCCCACATCCTCGCCGCGCGCCGCCTCACCACCG CCAAGGACGTGCTGTCGCTGCCGGAGGTGGAGCTCATGGGCGTCCTCGACGCCGGCATCC ACACCGCCCGCGCCGCCGTCGCCCACGTCAGCGAGATCGCCTGCCCTCCGTACCAAACGG CGCTTGCGCTCCTCGAGGCCTTCAGGGCAAGAGGAGATGGGCGGCTGGCCACCACGCTCC GCGGATTGGATGAGGCATTGCATGGAGGAATCCCCGCAGGGAAGCTCACTGAGGTCGTTG GGCCCTCGGGGATTGGCAAGACCCAGTTCTGTCTGAAGCTTGCTTTGCTAGCAACATTAC CAGAATGCTATGGAGGCTTAAATGGTCGAGTTTTGTATATTGATACTGAATCCAAATTCT CTTCACGGAGGATGATCGAGATTGGTGAGAAAAGCTTTCCTCAAATATTTCGTCAAGAAG GCTTGGCCCAAAAGATGGCTGGGAGGATCCTAGTCCTGCGCCCAACATCATTATCTGAAT TTACCAAGAGTTTGGAACAGATGAAGGTGACTCTTCTTCAGCATGATGTGAAGCTACTTG TTGTTGATAGCATGGCTGCTCTTATGTCATCTGAGATTGAGAAAAGCGCAACAGGTCTCA GACAACACCCTCTAAGATGGGCCCTTTCATTTCTTAAATCTATAGCAGAGTTCTCACAGA TTCCTGTTGTTGTTACAAACCAAGTACGCAGCCAAAGTAATGATGATGGCTATCGTTATT CATTTGAAGTTGAGAAGAAATACGATAGTAATAATGCTGAAGGCTTTGAATCTCATCTTG TTGCTGCTCTAGGAATCCAGTGGGCTCATGCTGTAACTATACGTCTAGTCTTTGAGGCTC ACTCAGGTCACAGGTACATCAAGGTAGCTAAATCCCCTATGACTCCAGCGGTAGCTTTTC CCTTTACTGTGGAGTCATCAGGAATAATATTACTTAGTGATGAGGGCATTGATGTGCCAT CTCCTGAAATAACCTCAATCCGTTGTCAAGGAGAAAATGTCCTGGCTCAATGACCATTTG AATGCTACCACATCTACAGTTGCAATATAAGAACTGAAGATATTTCTTCAGTCCCCAGGG ATGGCACAAATGGCTGATGATCAAGCTCATGCAGGATTCCATCCTTGATGACATCTGATA ATGTGGTGTCGAATTGAGGCAAAAAATTATCCTCGATTTCCTAGAAGATTGGCGTGTATT GCAATCCTTGTACCATCAGAGATGCTAACCCACCACCTCACCCCTAGTTGTGCAAGGAGG CCCAACAGCCAATTTGACCACGTACCTGCCACCCTGGGGGAATTAATCTAGAGGGCCATC GGTGGCGAAGAAGAGCAACTCATCGGAGAGAATGAATACGTACGCTAATATGACAATCAT CAAATCTTTCAAGATCCAGGTGACAGAATCTTAAGCATTCTAACATAGTGCCACGTAAAG GAGAAGATCTAGTTGCCCCCTCCCCCATGTGTTGGTGTAGCGTGTTTAGCAGTGGCGGTA AGTACTCCAGTACACTCACTCTGTC