Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0120800-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:1103397:1105229:1 gene:Os05g0120800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2870 domain containing protein. (Os05t0120800-01)
Sequence

ATGGTGGTGCTCCACGTCAGGTGGGCTGCAGCCTCCTCCTCCTCCTCGCCGCCGCCACCG
TCATCGCCGGAGGAGGAAGAGATGGAGTTCCTCCACGAGTGCGCCGCCTCCACCCCCGTC
GAGGACGTGGCGGCCGCGCTCGCCGGCGTCGCGGCACTCCAGGCCCGCCTGCTCTCCCTC
TGCCGCTCCCTTCGAGAGAGGGGCGCGGCGGCGGCAGCAGCGGCGGGTGAGGTCGAGAGG
GCGGTGGCGGAGGCTGAATCCTACGCCTCCAAGGAGCAAGTGCGGTACAACAGATTCTTA
TCCCCTCGTGCTCTAAGGGAGCATATCAAGAACATCGAAAAGACAGCTGTTACCGCTCTA
CAGGAGTCTCCTGAAGCGTTGTGCCTGCAACAGAAATCATCAGGCGACAAGCTTGAGAAT
GTTCAACTTTGGTGGGCTGGAAAAGAGCTGGCCATGGGCAAGAAGTTATGTGACTATATT
GGTGTTAATGACAAAACAAAGATTATCATCAGGTTAAAGCATGTTCCTCAATCCTCATGA

Peptide Sequence

PEP ID

Os05t0120800-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:1103397:1105229:1 gene:Os05g0120800 transcript:Os05t0120800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2870 domain containing protein. (Os05t0120800-01)
Sequence

MVVLHVRWAAASSSSSPPPPSSPEEEEMEFLHECAASTPVEDVAAALAGVAALQARLLSL
CRSLRERGAAAAAAAGEVERAVAEAESYASKEQVRYNRFLSPRALREHIKNIEKTAVTAL
QESPEALCLQQKSSGDKLENVQLWWAGKELAMGKKLCDYIGVNDKTKIIIRLKHVPQSS

Transcript Sequence

Transcript ID

Os05t0120800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:1103397:1105229:1 gene:Os05g0120800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF2870 domain containing protein. (Os05t0120800-01)
Sequence

GGGGAAGGAAGAAGCTCCGCGAAGTCCGGCGCGGCGGCGAGCACGAGATGGTGGTGCTCC
ACGTCAGGTGGGCTGCAGCCTCCTCCTCCTCCTCGCCGCCGCCACCGTCATCGCCGGAGG
AGGAAGAGATGGAGTTCCTCCACGAGTGCGCCGCCTCCACCCCCGTCGAGGACGTGGCGG
CCGCGCTCGCCGGCGTCGCGGCACTCCAGGCCCGCCTGCTCTCCCTCTGCCGCTCCCTTC
GAGAGAGGGGCGCGGCGGCGGCAGCAGCGGCGGGTGAGGTCGAGAGGGCGGTGGCGGAGG
CTGAATCCTACGCCTCCAAGGAGCAAGTGCGGTACAACAGATTCTTATCCCCTCGTGCTC
TAAGGGAGCATATCAAGAACATCGAAAAGACAGCTGTTACCGCTCTACAGGAGTCTCCTG
AAGCGTTGTGCCTGCAACAGAAATCATCAGGCGACAAGCTTGAGAATGTTCAACTTTGGT
GGGCTGGAAAAGAGCTGGCCATGGGCAAGAAGTTATGTGACTATATTGGTGTTAATGACA
AAACAAAGATTATCATCAGGTTAAAGCATGTTCCTCAATCCTCATGAGCTTTGAGTGTGC
TTCAACTACCCTTCATTGTTCCTGCAGAGTTAGTTTACTTTTGTTTTTGGGTAGTATGCT
AGTAGTATGCAAGTTATCCCCGTTGTAAATTATTATTCATCTTCTTCAGAAAACTCCTAT
TTTTATCTGTGCCATTGAAAACCTGTATAGACACCTTAACTGTAACATTTTCTTTTGATA
TCTTAGTATTCAATTTTGTCTTCAAGAGATGTGACCATTC