Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0116700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:898855:903040:1 gene:Os05g0116700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os05t0116700-01)
Sequence	ATGCTGCGCGGCGGCGGCACCACCGGTGGCTCGCGACCCGCGGCGAAGCACCACCGCCGC TCGAGGCCGCCGTCTTCGCCGGCTCCGTCGTCGCGGCGAGCGGCACGGACGGCAACCACC TCACCGGAGTCGAAGGGCGCGACGGCGTTGCAGGATCCGGTGGTTTCCTCCATGGAAGAG ACCTCTTTCACTTTTGAATTCAAACGAGGGTCTAAAAGAGCTAAGAAAACGATGCTGCCT GAAGAATCACATAAAGGGAAAAATGATTCCACGAAGGGTTTCTCTAACAAAAGAAATCTG GTTCCTGCAAAGACACCATCTGCAAAGGAAAGACCGGAGCAAGTGGAGTTCACACATTGT TCACCTGGTATTGTTGCCAGGCTCATGGGACTTGACACCGTGCCTCGCCCCAAGAAAGCT CTTGACCGGTGCCAAAGTGACATTCAGTGCAATATGCAGCGGGTCCTATCTGGAGGTGAT CAAGTCTATGATGCTTCATCTGAGGATCAACCATGTAGCAGCAGTGCTGATGATCTTCCT GAACTCAAGGATGTTTTCGAGGTCACTGAGATGGAGAATAAGGAGACGTGCATTGGGTTG CAATCAGGGAACGAGGAGCCATGTCCCAGGAGTGATAAGGATGATTTGGAATTTGTGAGG CAGAAATTCTTGGATGCGAAGCGCCTTTCCACCGATGAATCCCATAGGAATTCTAAGGAG TTTGCTGAAGCACTTGAGATATTGTACTCCAAAAAAGATGCCTTCCTTGAAATCCTTCAG GAGAACAGTGGTGCATTGCCAGGATTCTCAGGGCACATCTTTGGTCACAATGGATTACAA TACTCCAAATTGTTTGAGCAAGAGAACTGTTCTCGCATGGGTGTTGAACGTGACGAGTTT TTTAATGTACCAAAGGAGTTGGAAAATCCTATTCCTAGTAGTCGTCTCAACGAAACTTAT GGTGTACCACTGGATTCTTTGCCACCAAAAGGGAGCAAGAGTAAAGGTTCAAGCCGTCGT TCCCAAATTGTTGTTCTGAAACCAAATCTTCAGAGGAAAAGTTTTACACCTGTCCTATCA AGTGAAACATCGCATTTTGGTGAAATGAGCACTAACAACTGTTCAAGGCCCCAACACCAT TGTATGCATAGGGGGCGAGTCACGCACTCTGCACCACTTAACAATGATCAAGTTTTACAA CCAAAACGAGACACACCTGGACTGAGGGGTGCAATAGAAACCCCTAAAATAGGTTCCAGA AGGAAATCGTCTGAGAGAGAGTGTCAGCTTGCAATTGGCAGTGGAAGGGCAACAGATACT CCTAGTTCTTTTGAAGATAACCTACCAATTTACCCACCCAATCATTCTGTTGGATCATCA GTCTGCAGAAAGGCCAAAAAGCACCTCTCGGAACGATGGCAGATGGCCTATCAATCTGAT GAAGAAATCTCAATGCCTAAAGATACCATAACATTAGGGGAGATGCTTGAGATGACCGAT AGAGATGCGACAAAAGTAATCACCCACAAGATTTCATCAGAAACCAATTACAATCATGAT AATGTGCAGAAGGCACCAGCCTGTCCTGTTGGTATCAGTAGTAAAGATGGTTGGAAGACA GGGATTTATTGTAAAGATAATTCAAGATCTGGCACATCGAGGAATTTTTCTAGGTCGAAG TCTCTACCGACCTCAGCTACCAACAATGCAAAATTACCGTGCAGGAAACAATCTGCACCA ATTTGTAACCTGCCCATTCTGAAAGATCTATTGAATGCACCAACTGATGAATCTGGAAGT GAACATGTCAGGAATAGATCATCTTTTAGAAAAACAAAGCAGAGAAGTGGGAAGGCTATC ATCCATGCAGGAAAGGAAAACATGCTACCTGTGAAAGAGATTCATGTAACTTCAGAGAAA GCAAGACATAGTATCTGCATTTCCGATTTGTCTCGAGCAAGCAACACACATAGTGAACAT CCTGATGGTGTTATGAGTAATGAGGATCACCAAACATCTGGTTCTACTGCTCTAGATGAT GATTTACAAAGTTCTAAAGAAAGGATGGGGTGGACAGAGCTGAAACTAACACCACCATTA CCAGTGACAAAAGAAGACACATCGATTCATAATCAGGACAACATAGTGTTGAAGGACCAG GAGGGGAGAAACCAACAAGTGGAGATTGACATCGCTGAAGCTGAATCTCAAGCAATAGAT TCTTCTCATATCATAAGCTTAGAAAATCACAAATGCTCAAATTCAACTGCTTCATTGCAA CAAATTTGTGGACATGATACTGCATATTCTGGAATTTTTAAAGGCGTCAGTGACGGTATT CAAGAACTTAGAATGCAACTTAAGATGCTGAAGATGGGTGACCAAGATGATACCTGTGGA GATGATATCTATATGTTGTCGAGTGATGAGTGCAGTGATACAGACAACTTGACCTATCAG CTGATGGAAGAGCAATTACCTGTATTTAAGGATGAGTACGACAGGGACTTCAGTTATACA AATGATATACTTGGTTCAGCATCTGATTTTCTAGTCTACCCAGAAGATTGGCAAGTGAGC CCAGATGTGTTTGTGTGGCTTGAAGACAAGTACAGCAAGCTGCTTCTATGGTCGAAATCG GACAGGAGACTTTTGTTTGACCTCATAAACTCCATCTTAGCTGATATGACTGCTCCAGGC AACAGTCTGTGTTCAAATATCATGGTGAAGTGTTGGTCTGAAATGGATCCAAGGAAGTTA GCTGAAAATGTTTGGCAAACAGTGCTCAATAGGAGGAATTATGAACCCTTTTCTTTGGAT TGTGTTGAAGCTTTGCCATTGGACCATCATTCTGAAGTTGAAGCAATAGGAGCAGAGATT GTCAAGATGTTACATGATGATATTCTAGAGGAGTCTGTAGCTGAATTCATATCACAGTAG

Peptide Sequence

PEP ID	Os05t0116700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:898855:903040:1 gene:Os05g0116700 transcript:Os05t0116700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os05t0116700-01)
Sequence	MLRGGGTTGGSRPAAKHHRRSRPPSSPAPSSRRAARTATTSPESKGATALQDPVVSSMEE TSFTFEFKRGSKRAKKTMLPEESHKGKNDSTKGFSNKRNLVPAKTPSAKERPEQVEFTHC SPGIVARLMGLDTVPRPKKALDRCQSDIQCNMQRVLSGGDQVYDASSEDQPCSSSADDLP ELKDVFEVTEMENKETCIGLQSGNEEPCPRSDKDDLEFVRQKFLDAKRLSTDESHRNSKE FAEALEILYSKKDAFLEILQENSGALPGFSGHIFGHNGLQYSKLFEQENCSRMGVERDEF FNVPKELENPIPSSRLNETYGVPLDSLPPKGSKSKGSSRRSQIVVLKPNLQRKSFTPVLS SETSHFGEMSTNNCSRPQHHCMHRGRVTHSAPLNNDQVLQPKRDTPGLRGAIETPKIGSR RKSSERECQLAIGSGRATDTPSSFEDNLPIYPPNHSVGSSVCRKAKKHLSERWQMAYQSD EEISMPKDTITLGEMLEMTDRDATKVITHKISSETNYNHDNVQKAPACPVGISSKDGWKT GIYCKDNSRSGTSRNFSRSKSLPTSATNNAKLPCRKQSAPICNLPILKDLLNAPTDESGS EHVRNRSSFRKTKQRSGKAIIHAGKENMLPVKEIHVTSEKARHSICISDLSRASNTHSEH PDGVMSNEDHQTSGSTALDDDLQSSKERMGWTELKLTPPLPVTKEDTSIHNQDNIVLKDQ EGRNQQVEIDIAEAESQAIDSSHIISLENHKCSNSTASLQQICGHDTAYSGIFKGVSDGI QELRMQLKMLKMGDQDDTCGDDIYMLSSDECSDTDNLTYQLMEEQLPVFKDEYDRDFSYT NDILGSASDFLVYPEDWQVSPDVFVWLEDKYSKLLLWSKSDRRLLFDLINSILADMTAPG NSLCSNIMVKCWSEMDPRKLAENVWQTVLNRRNYEPFSLDCVEALPLDHHSEVEAIGAEI VKMLHDDILEESVAEFISQ

Transcript Sequence

Transcript ID	Os05t0116700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:898855:903040:1 gene:Os05g0116700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF3741 domain containing protein. (Os05t0116700-01)
Sequence	AGTGGAGAGAGAGACGAGCAAAGCAGAGCAGAGAGAGAGAAGGCCTGCGCCGGCGAAGCC TCGAGAGGAAAAGGATGCTGCGCGGCGGCGGCACCACCGGTGGCTCGCGACCCGCGGCGA AGCACCACCGCCGCTCGAGGCCGCCGTCTTCGCCGGCTCCGTCGTCGCGGCGAGCGGCAC GGACGGCAACCACCTCACCGGAGTCGAAGGGCGCGACGGCGTTGCAGGATCCGGTGGTTT CCTCCATGGAAGAGACCTCTTTCACTTTTGAATTCAAACGAGGGTCTAAAAGAGCTAAGA AAACGATGCTGCCTGAAGAATCACATAAAGGGAAAAATGATTCCACGAAGGGTTTCTCTA ACAAAAGAAATCTGGTTCCTGCAAAGACACCATCTGCAAAGGAAAGACCGGAGCAAGTGG AGTTCACACATTGTTCACCTGGTATTGTTGCCAGGCTCATGGGACTTGACACCGTGCCTC GCCCCAAGAAAGCTCTTGACCGGTGCCAAAGTGACATTCAGTGCAATATGCAGCGGGTCC TATCTGGAGGTGATCAAGTCTATGATGCTTCATCTGAGGATCAACCATGTAGCAGCAGTG CTGATGATCTTCCTGAACTCAAGGATGTTTTCGAGGTCACTGAGATGGAGAATAAGGAGA CGTGCATTGGGTTGCAATCAGGGAACGAGGAGCCATGTCCCAGGAGTGATAAGGATGATT TGGAATTTGTGAGGCAGAAATTCTTGGATGCGAAGCGCCTTTCCACCGATGAATCCCATA GGAATTCTAAGGAGTTTGCTGAAGCACTTGAGATATTGTACTCCAAAAAAGATGCCTTCC TTGAAATCCTTCAGGAGAACAGTGGTGCATTGCCAGGATTCTCAGGGCACATCTTTGGTC ACAATGGATTACAATACTCCAAATTGTTTGAGCAAGAGAACTGTTCTCGCATGGGTGTTG AACGTGACGAGTTTTTTAATGTACCAAAGGAGTTGGAAAATCCTATTCCTAGTAGTCGTC TCAACGAAACTTATGGTGTACCACTGGATTCTTTGCCACCAAAAGGGAGCAAGAGTAAAG GTTCAAGCCGTCGTTCCCAAATTGTTGTTCTGAAACCAAATCTTCAGAGGAAAAGTTTTA CACCTGTCCTATCAAGTGAAACATCGCATTTTGGTGAAATGAGCACTAACAACTGTTCAA GGCCCCAACACCATTGTATGCATAGGGGGCGAGTCACGCACTCTGCACCACTTAACAATG ATCAAGTTTTACAACCAAAACGAGACACACCTGGACTGAGGGGTGCAATAGAAACCCCTA AAATAGGTTCCAGAAGGAAATCGTCTGAGAGAGAGTGTCAGCTTGCAATTGGCAGTGGAA GGGCAACAGATACTCCTAGTTCTTTTGAAGATAACCTACCAATTTACCCACCCAATCATT CTGTTGGATCATCAGTCTGCAGAAAGGCCAAAAAGCACCTCTCGGAACGATGGCAGATGG CCTATCAATCTGATGAAGAAATCTCAATGCCTAAAGATACCATAACATTAGGGGAGATGC TTGAGATGACCGATAGAGATGCGACAAAAGTAATCACCCACAAGATTTCATCAGAAACCA ATTACAATCATGATAATGTGCAGAAGGCACCAGCCTGTCCTGTTGGTATCAGTAGTAAAG ATGGTTGGAAGACAGGGATTTATTGTAAAGATAATTCAAGATCTGGCACATCGAGGAATT TTTCTAGGTCGAAGTCTCTACCGACCTCAGCTACCAACAATGCAAAATTACCGTGCAGGA AACAATCTGCACCAATTTGTAACCTGCCCATTCTGAAAGATCTATTGAATGCACCAACTG ATGAATCTGGAAGTGAACATGTCAGGAATAGATCATCTTTTAGAAAAACAAAGCAGAGAA GTGGGAAGGCTATCATCCATGCAGGAAAGGAAAACATGCTACCTGTGAAAGAGATTCATG TAACTTCAGAGAAAGCAAGACATAGTATCTGCATTTCCGATTTGTCTCGAGCAAGCAACA CACATAGTGAACATCCTGATGGTGTTATGAGTAATGAGGATCACCAAACATCTGGTTCTA CTGCTCTAGATGATGATTTACAAAGTTCTAAAGAAAGGATGGGGTGGACAGAGCTGAAAC TAACACCACCATTACCAGTGACAAAAGAAGACACATCGATTCATAATCAGGACAACATAG TGTTGAAGGACCAGGAGGGGAGAAACCAACAAGTGGAGATTGACATCGCTGAAGCTGAAT CTCAAGCAATAGATTCTTCTCATATCATAAGCTTAGAAAATCACAAATGCTCAAATTCAA CTGCTTCATTGCAACAAATTTGTGGACATGATACTGCATATTCTGGAATTTTTAAAGGCG TCAGTGACGGTATTCAAGAACTTAGAATGCAACTTAAGATGCTGAAGATGGGTGACCAAG ATGATACCTGTGGAGATGATATCTATATGTTGTCGAGTGATGAGTGCAGTGATACAGACA ACTTGACCTATCAGCTGATGGAAGAGCAATTACCTGTATTTAAGGATGAGTACGACAGGG ACTTCAGTTATACAAATGATATACTTGGTTCAGCATCTGATTTTCTAGTCTACCCAGAAG ATTGGCAAGTGAGCCCAGATGTGTTTGTGTGGCTTGAAGACAAGTACAGCAAGCTGCTTC TATGGTCGAAATCGGACAGGAGACTTTTGTTTGACCTCATAAACTCCATCTTAGCTGATA TGACTGCTCCAGGCAACAGTCTGTGTTCAAATATCATGGTGAAGTGTTGGTCTGAAATGG ATCCAAGGAAGTTAGCTGAAAATGTTTGGCAAACAGTGCTCAATAGGAGGAATTATGAAC CCTTTTCTTTGGATTGTGTTGAAGCTTTGCCATTGGACCATCATTCTGAAGTTGAAGCAA TAGGAGCAGAGATTGTCAAGATGTTACATGATGATATTCTAGAGGAGTCTGTAGCTGAAT TCATATCACAGTAGAGCTGCATCTCTGTCAGATGTACATAGCCTGCTGCAAATCACTGGT TTGCAAGAAGGTTTTACCATGTACTATTATGTGGGGGCTCCATTTAATTACATTTGATAT GGAGCGTTTGTAAGCTGTGAAACCTATTGTACCTGGGAGCCCTGGACTAATTGTGCTACT ACCAACTAACACTACTCTAGTAGAACATACTGATGTCAAATTTTCC