Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0116000-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:873167:875943:-1 gene:Os05g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os05t0116000-01);Cupin, RmlC-type domain containing protein. (Os05t0116000-02)
Sequence	ATGGCGTCCGTGGATCTGACCCCGAGGCAGGCGAGGAAGGCGTACGGCGGCGATGGTGGG ACCTACTACGAGTGGAGCCCCGCAGACCTGCCCATGCTGGAACTCGCCAACATCGGCGGC GCCAAGCTGTCGCTCAACGCCGGTGGCCTCGCCCTGCCCAGCTTTTCCGACTCCGGAAAG GTTGCGTATGTTCTTCAAGGCAAGGGCACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAG GAGAAGGTGATCGCCGTGAAGGAGGGAGACTCCCTGGCACTCCCCTTTGGCGTGGTGACA TGGTGGCATAACCTCCCGGAGTCCCCAATCGAGCTCGTCATCCTCTTCCTCGGCGACACA TCGAAGGCGCACAAGGCCGGCCAATTCACAAACATGCAGCTCACCGGTGCCACCGGCATC TTCACCGGCTTCTCCACGGAGTTCGTCGGCCGCGCATGGGACCTCGCCGAGTCCGACGCC GTCAAGCTCGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGATCAAGTCCGGCCAGAAG CTCCCCGAGCCGTCGGCCGCCGACCGCGAGGGCATGGCGCTCAACTGCCTGGAGGCGCCG CTCGACGTGGACATCAAGAACGGCGGCCGCGTGGTGGTGCTCAACACGGCGAACCTGCCG ATGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC TCGCCGGGGTTCTCGTGCGACTCGGCGTACCAGGTCACCTACTTCATCCGCGGCAGCGGC CGCGTCCAGGTGGTCGGCGCCGACGGGAAGCGCGTGCTGGACACCCACGTCGAGGGCGGC AACCTGTTCATCGTGCCGCGCTTCTGCGTCGTCTCCAAGATCGCCGACGCCTCCGGCCTG CAGTGGTTCTCCATTATCACCACACCAAACCCGATCTTCAGTCACCTGGCGGGGAAGACG TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGCGTCGTTCAACGCGACGCCGGAG ATGGAGAAGCTGTTCCGGTCCAAAAGGATCGACTCGGAGATCTTCTTCGCGCCCAACTGA

Peptide Sequence

PEP ID	Os05t0116000-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:873167:875943:-1 gene:Os05g0116000 transcript:Os05t0116000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os05t0116000-01);Cupin, RmlC-type domain containing protein. (Os05t0116000-02)
Sequence	MASVDLTPRQARKAYGGDGGTYYEWSPADLPMLELANIGGAKLSLNAGGLALPSFSDSGK VAYVLQGKGTCGIVLPEASKEKVIAVKEGDSLALPFGVVTWWHNLPESPIELVILFLGDT SKAHKAGQFTNMQLTGATGIFTGFSTEFVGRAWDLAESDAVKLVSSQPASGIVKIKSGQK LPEPSAADREGMALNCLEAPLDVDIKNGGRVVVLNTANLPMVKEVGLGADLVRIDGHSMC SPGFSCDSAYQVTYFIRGSGRVQVVGADGKRVLDTHVEGGNLFIVPRFCVVSKIADASGL QWFSIITTPNPIFSHLAGKTSVWKAISPEVLEASFNATPEMEKLFRSKRIDSEIFFAPN

Transcript Sequence

Transcript ID	Os05t0116000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:873167:875943:-1 gene:Os05g0116000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os05t0116000-01);Cupin, RmlC-type domain containing protein. (Os05t0116000-02)
Sequence	ACCAAAACCTCTCCAATCCCCAAATCCTCCTCATCTCCTCTTCCAGAACCTTTCTTTTTC GATTTCGTGTTCGAGTTCTTTGTGATTGCAGCGATGGCGTCCGTGGATCTGACCCCGAGG CAGGCGAGGAAGGCGTACGGCGGCGATGGTGGGACCTACTACGAGTGGAGCCCCGCAGAC CTGCCCATGCTGGAACTCGCCAACATCGGCGGCGCCAAGCTGTCGCTCAACGCCGGTGGC CTCGCCCTGCCCAGCTTTTCCGACTCCGGAAAGGTTGCGTATGTTCTTCAAGGCAAGGGC ACTTGTGGCATTGTCCTGCCGGAGGCGAGCAAGGAGAAGGTGATCGCCGTGAAGGAGGGA GACTCCCTGGCACTCCCCTTTGGCGTGGTGACATGGTGGCATAACCTCCCGGAGTCCCCA ATCGAGCTCGTCATCCTCTTCCTCGGCGACACATCGAAGGCGCACAAGGCCGGCCAATTC ACAAACATGCAGCTCACCGGTGCCACCGGCATCTTCACCGGCTTCTCCACGGAGTTCGTC GGCCGCGCATGGGACCTCGCCGAGTCCGACGCCGTCAAGCTCGTGTCCAGCCAGCCTGCC TCCGGCATCGTCAAGATCAAGTCCGGCCAGAAGCTCCCCGAGCCGTCGGCCGCCGACCGC GAGGGCATGGCGCTCAACTGCCTGGAGGCGCCGCTCGACGTGGACATCAAGAACGGCGGC CGCGTGGTGGTGCTCAACACGGCGAACCTGCCGATGGTGAAGGAGGTCGGGCTCGGCGCC GACCTGGTGAGGATCGACGGCCACTCCATGTGCTCGCCGGGGTTCTCGTGCGACTCGGCG TACCAGGTCACCTACTTCATCCGCGGCAGCGGCCGCGTCCAGGTGGTCGGCGCCGACGGG AAGCGCGTGCTGGACACCCACGTCGAGGGCGGCAACCTGTTCATCGTGCCGCGCTTCTGC GTCGTCTCCAAGATCGCCGACGCCTCCGGCCTGCAGTGGTTCTCCATTATCACCACACCA AACCCGATCTTCAGTCACCTGGCGGGGAAGACGTCGGTGTGGAAGGCGATCTCGCCGGAG GTGCTGGAGGCGTCGTTCAACGCGACGCCGGAGATGGAGAAGCTGTTCCGGTCCAAAAGG ATCGACTCGGAGATCTTCTTCGCGCCCAACTGAGCAGCTTCCCTTTGCCATTGCGTCGTC GCGTCGGTGTCGTCTTAAATTAGGATTAAGTCATTAATAATTTCATCTCTTATCATGAGA TGTTACTACCTTCTGTCAGTCTTATGCTATTGCGGTTGAACTGTGGTGATTCGCCACTTA AAATTCTATTCTATTCGAGAGTGCCTTCTGGTGCAAATTTGCTC