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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0113900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:738208:739079:1 gene:Os05g0113900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os05t0113900-01)
Sequence

ATGGACGTCGGCGTCGGCGGCAAGGCGGCGAAGAAGGCGGTGGGGCGGAAGCTGGGCGGG
CCGAAGAAGAAGCCGGTGTCGCGCTCCGTCAAGGCCGGGCTCCAGTTCCCCGTCGGCCGC
ATCGGCCGCTACCTCAAGAAGGGCCGCTACGCCCAGCGCGTCGGCACCGGCGCCCCCGTC
TACCTCGCCGCCGTCCTCGAGTACCTCGCCGCAGAGGTGCTGGAGCTCGCCGGGAACGCG
GCGCGGGACAACAAGAAGAACCGGATCATCCCGAGGCACGTGCTGCTGGCGATCCGCAAC
GACGAGGAGCTCGGGAAGCTGCTCGCCGGGGTCACCATCGCGCACGGCGGCGTGCTGCCG
AACATCAACCCGGTGCTGCTCCCGAAGAAGACCGCGGAGAAGGCCGACAAGCCGGCCAAG
GCGTCCAAGGACAAAGCCGCCAAGTCCCCCAAGAAGCAGGCGCGCTCCTAG

Peptide Sequence

PEP ID

Os05t0113900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:738208:739079:1 gene:Os05g0113900 transcript:Os05t0113900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os05t0113900-01)
Sequence

MDVGVGGKAAKKAVGRKLGGPKKKPVSRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPV
YLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLP
NINPVLLPKKTAEKADKPAKASKDKAAKSPKKQARS

Transcript Sequence

Transcript ID

Os05t0113900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:738208:739079:1 gene:Os05g0113900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Histone H2A. (Os05t0113900-01)
Sequence

TCCAAATCGGCGCCGGAAATCCCTTCAAATCCCCCCCGAATTCCGCTCCATTTCACCCTC
ACGTTTCCCGGAGATGGACGTCGGCGTCGGCGGCAAGGCGGCGAAGAAGGCGGTGGGGCG
GAAGCTGGGCGGGCCGAAGAAGAAGCCGGTGTCGCGCTCCGTCAAGGCCGGGCTCCAGTT
CCCCGTCGGCCGCATCGGCCGCTACCTCAAGAAGGGCCGCTACGCCCAGCGCGTCGGCAC
CGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCAGAGGTGCTGGAGCT
CGCCGGGAACGCGGCGCGGGACAACAAGAAGAACCGGATCATCCCGAGGCACGTGCTGCT
GGCGATCCGCAACGACGAGGAGCTCGGGAAGCTGCTCGCCGGGGTCACCATCGCGCACGG
CGGCGTGCTGCCGAACATCAACCCGGTGCTGCTCCCGAAGAAGACCGCGGAGAAGGCCGA
CAAGCCGGCCAAGGCGTCCAAGGACAAAGCCGCCAAGTCCCCCAAGAAGCAGGCGCGCTC
CTAGCTTCATGTCCTTCCATTCATTGGTCACTGTATATGCAGTACTTAGTTTGTTCGATT
CGAGATTAGTTCGTATCACTAGGCATTTAACTGGATGTTTTCGATTTTAGCTTGCAAGAC
ACTAGGGTAGTTCTAATGAGAAGATGAAGTGTCTCGCTTTGTCTTCTGGATCCCATGTGC
TTCAATATGTGGTTTCTCAATTGAAATTTGTTTGTGTTCAGTAAGTTTAATAGCCTGATT
GTGAATCTGATCT