Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0113000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:701583:705308:1 gene:Os05g0113000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid-binding ACT domain containing protein. (Os05t0113000-01);Similar to Amino acid binding protein. (Os05t0113000-02)
Sequence	ATGCCGCCGGTGGGGGAGGTGGCGGCGGCGGAGGCGAGATCGGGGATGGTGCTCGGGGGA GGGGCGGCGGCGGCGGCGGTGGGGGGAGGGGAGGACGCGGTGGTGATGCAGGTGGCGGGG GCGGAGGGGCAGGACAGCGTCATCACCATCAACTGCCCCGACCAGGCGGGCCTCGGCTGC GACCTCTGCCGCACCATCCTCGAGTTCGGCCTCCGCATCACGCGCGGCGCAGATGTGTCT ACGGATGGGCAATGGTGCTTCGTTGTGTTCTGGGTCGTGCCCCGCACGCCATCAATCAAG GTCCGGTGGGCGAATCTCAAGAACCGCCTCATGTCAATGTGCCCGTCAAATTACCCAATG ACTTTCTACCCTGAGATCACCCAGCCAGGCCCCTCCCAGTTCTACCTTCTCAAGCTTTTC TCAGCTGATCGCAAAGGGCTATTGCACGATGTTACGCATATATTATCGGAACTAGAGCTT ATAATCCACAGAGTGAAGGTGTCAACCACGCCAGATGGCAGAGTTATTGACCTCTTCTTC ATCACCGACGGCATGGAATTATTGCACACAAAGGAAAGACAAGAAGAGACTTGTTCGATG CTGATTGCTACCTTAGGTCCTTCCATAAGCTGTGAAATCCTATTAGCAGAAGGGTTCCAG CAAGGATTCTCTTCTCTCCCACCGACAATCTCTGAGGAGCTGTTCAGGTTGGAACTGGCT GATGGTGACAACTGTTCAAGGTCAATTTGTGCGGAGATGAAAAGAGTGCAGAAAGCAACC ATCAACTTTGACAATACCCTGAGCCCCGCACACACACTGCTCCAAATTAACTGTGCTGAT CAAAAGGGGCTCCTTTATGATATTTTGAGAACAATGAAGGACTGCAGCATTCAGGTAACA TATGGCCGATTCTGGTCAGACAAGAAAGGTTTTCGAGAGGTGGATCTTTTTATCAAGCAA GCGGATGGAAAGAAGATTATTGATCCTGAGAAACAGGATGTTCTCAGCTCACGCCTGAGG TCAGAGATGCTCCATCCTCTCAGGGTGATGATTGTCAACCGGGGTCCCGATGTAGAACTC CTTGTTGCTAACCCTGTTGAGCTATCCGGGAAGGGACGACCACGTGTATTCTACGATGCT ACATTTGCTCTGAAAGCGCTTGGGATCTGCATTTTCTCTGTAAGAATCACAGAATATTCA GAGAGGGTTCAAAATGAATTTGTATTTACTCTCTTGCTTATGCATTTCAGGCTGAAATTG GGAGGCAGGCAGCATCAGAGCGTCAATGGGAGGTCTACAGATTCCTCCTGGATGATAGCA GTGAGTTCCCATTGTCAAACAGCCTTGTCAATAGGAACCGTATTGTCGACAGGGTAA

Peptide Sequence

PEP ID	Os05t0113000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:701583:705308:1 gene:Os05g0113000 transcript:Os05t0113000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid-binding ACT domain containing protein. (Os05t0113000-01);Similar to Amino acid binding protein. (Os05t0113000-02)
Sequence	MPPVGEVAAAEARSGMVLGGGAAAAAVGGGEDAVVMQVAGAEGQDSVITINCPDQAGLGC DLCRTILEFGLRITRGADVSTDGQWCFVVFWVVPRTPSIKVRWANLKNRLMSMCPSNYPM TFYPEITQPGPSQFYLLKLFSADRKGLLHDVTHILSELELIIHRVKVSTTPDGRVIDLFF ITDGMELLHTKERQEETCSMLIATLGPSISCEILLAEGFQQGFSSLPPTISEELFRLELA DGDNCSRSICAEMKRVQKATINFDNTLSPAHTLLQINCADQKGLLYDILRTMKDCSIQVT YGRFWSDKKGFREVDLFIKQADGKKIIDPEKQDVLSSRLRSEMLHPLRVMIVNRGPDVEL LVANPVELSGKGRPRVFYDATFALKALGICIFSVRITEYSERVQNEFVFTLLLMHFRLKL GGRQHQSVNGRSTDSSWMIAVSSHCQTALSIGTVLSTG

Transcript Sequence

Transcript ID	Os05t0113000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:701583:705308:1 gene:Os05g0113000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Amino acid-binding ACT domain containing protein. (Os05t0113000-01);Similar to Amino acid binding protein. (Os05t0113000-02)
Sequence	GGACTCCACAGGAGGAGGAGGAGGAGGAGGAGAGAGGGATCCGGAATCTCGCGGGGGGGA TGCCGCCGGTGGGGGAGGTGGCGGCGGCGGAGGCGAGATCGGGGATGGTGCTCGGGGGAG GGGCGGCGGCGGCGGCGGTGGGGGGAGGGGAGGACGCGGTGGTGATGCAGGTGGCGGGGG CGGAGGGGCAGGACAGCGTCATCACCATCAACTGCCCCGACCAGGCGGGCCTCGGCTGCG ACCTCTGCCGCACCATCCTCGAGTTCGGCCTCCGCATCACGCGCGGCGCAGATGTGTCTA CGGATGGGCAATGGTGCTTCGTTGTGTTCTGGGTCGTGCCCCGCACGCCATCAATCAAGG TCCGGTGGGCGAATCTCAAGAACCGCCTCATGTCAATGTGCCCGTCAAATTACCCAATGA CTTTCTACCCTGAGATCACCCAGCCAGGCCCCTCCCAGTTCTACCTTCTCAAGCTTTTCT CAGCTGATCGCAAAGGGCTATTGCACGATGTTACGCATATATTATCGGAACTAGAGCTTA TAATCCACAGAGTGAAGGTGTCAACCACGCCAGATGGCAGAGTTATTGACCTCTTCTTCA TCACCGACGGCATGGAATTATTGCACACAAAGGAAAGACAAGAAGAGACTTGTTCGATGC TGATTGCTACCTTAGGTCCTTCCATAAGCTGTGAAATCCTATTAGCAGAAGGGTTCCAGC AAGGATTCTCTTCTCTCCCACCGACAATCTCTGAGGAGCTGTTCAGGTTGGAACTGGCTG ATGGTGACAACTGTTCAAGGTCAATTTGTGCGGAGATGAAAAGAGTGCAGAAAGCAACCA TCAACTTTGACAATACCCTGAGCCCCGCACACACACTGCTCCAAATTAACTGTGCTGATC AAAAGGGGCTCCTTTATGATATTTTGAGAACAATGAAGGACTGCAGCATTCAGGTAACAT ATGGCCGATTCTGGTCAGACAAGAAAGGTTTTCGAGAGGTGGATCTTTTTATCAAGCAAG CGGATGGAAAGAAGATTATTGATCCTGAGAAACAGGATGTTCTCAGCTCACGCCTGAGGT CAGAGATGCTCCATCCTCTCAGGGTGATGATTGTCAACCGGGGTCCCGATGTAGAACTCC TTGTTGCTAACCCTGTTGAGCTATCCGGGAAGGGACGACCACGTGTATTCTACGATGCTA CATTTGCTCTGAAAGCGCTTGGGATCTGCATTTTCTCTGTAAGAATCACAGAATATTCAG AGAGGGTTCAAAATGAATTTGTATTTACTCTCTTGCTTATGCATTTCAGGCTGAAATTGG GAGGCAGGCAGCATCAGAGCGTCAATGGGAGGTCTACAGATTCCTCCTGGATGATAGCAG TGAGTTCCCATTGTCAAACAGCCTTGTCAATAGGAACCGTATTGTCGACAGGGTAAGGAA AACGCTGCTGGGCTGTTACAACTGAGACTTGGTTTCTATCTCCACCAATCCAAAGCTCAA AGACAACTGATACAGTCAGTATCCAAACTGTTCCAGTTAATTACCAGGCGAACGCTCAGA CTAGGACTACTCCAGGTTTGTCACTGCCGGTGATAAACTTGCTGCCATAACTGGCTGGTA TCACTGCCTACAATTGCCAGTTTTCTGTTCATGTCATCATGTCATTGAAGGATATGTTAC GGGTTTGTGACCAACTCATCGTGTTCAGTGGTGATGGAAGAAAGTATCTTTATGAAGGTC GCCTGCTTGTCATCTTCAGAAAGAGCTGGCAATATGTGTAACAAAGGAGCGGATGACATA CCCAGAATATGTTATTTGGAGTTACATACTCTGAGCACTGTTGTAAATGGTTTCTGAAAA TGACAAATGAGCATAATTGCATCTCCGTCTCCCAATTCCAATCCATTTTCACGTTGCTCA CATGTTATGTCATGAAGAGAGAAAGAAAGAGAGGAAAAAGGCATATGTTTGGTGGGAGGA GCAAATCGGAGCTTCAATTATTGTGCTTTGTTTTGGCCAGGGTATTACTGGATGCTGACA CAGATACATGAGCTTGTTGTAAAGTAGTGCAAGATGTGCCATCTGCCTCACCTGCCTTGC TTTCCTGCCTCCTTCCTACCTTCCTGTATGATTGCTATTTCTTGAGTAGATTAACCCTGT TCCCTGATGTGGGGTTTGTACTTGTCACTTTGTCAGCATTCATGCTAGTTTCTAGAGCTT AGAGCCCTAGTTTGTTAATGCAAAAGCATATTATAAATATATGTACCATCTGGTTGTAAA TGACTCGATGAAATTCTCTAGTGACCACTATTCTCGTGTACATTGTTTTGAACCAAACAC CTGAATAATTTGATCAGTAATT