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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0111100-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:599130:599776:-1 gene:Os05g0111100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Tim10/DDP-type family protein. (Os05t0111100-01)
Sequence

ATGGACGCCGCCGCCGCCATGGCCGCCGGCGGCGGGGAGGAGGAGGAGGACAAGGCGCGC
ATGGAGGCCGTCGCCGACAAGCTCCAGACCCGAGACGCGATACGGCTGTACAACTGGGTG
TCGCACCGGTGCTTCTCCGACTGCGTCACCACCTTCTACCGGCGAACCCTCGGCAAGAAG
GAGGAGGACTGCGTCAGGTCCTGCGTCCGCAAGTTCCTCCTCCTCTCCTCCGCCTCCGCC
GCCCGCTTCGCCCACCTCGCCGACCCCTCATCCGCCTTCGACGACTGA

Peptide Sequence

PEP ID

Os05t0111100-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:599130:599776:-1 gene:Os05g0111100 transcript:Os05t0111100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Tim10/DDP-type family protein. (Os05t0111100-01)
Sequence

MDAAAAMAAGGGEEEEDKARMEAVADKLQTRDAIRLYNWVSHRCFSDCVTTFYRRTLGKK
EEDCVRSCVRKFLLLSSASAARFAHLADPSSAFDD

Transcript Sequence

Transcript ID

Os05t0111100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:599130:599776:-1 gene:Os05g0111100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, Tim10/DDP-type family protein. (Os05t0111100-01)
Sequence

CTCCTTCTCCTTCTTCTTCTTCTTCTTGTGCTGCTACTGAAGAAGAGCATGGACGCCGCC
GCCGCCATGGCCGCCGGCGGCGGGGAGGAGGAGGAGGACAAGGCGCGCATGGAGGCCGTC
GCCGACAAGCTCCAGACCCGAGACGCGATACGGCTGTACAACTGGGTGTCGCACCGGTGC
TTCTCCGACTGCGTCACCACCTTCTACCGGCGAACCCTCGGCAAGAAGGAGGAGGACTGC
GTCAGGTCCTGCGTCCGCAAGTTCCTCCTCCTCTCCTCCGCCTCCGCCGCCCGCTTCGCC
CACCTCGCCGACCCCTCATCCGCCTTCGACGACTGACCTCAACCTTCTCCCAGATTAGAT
TCTTATACTCTAGCTTCTTTTCATCACATCAGATAGGATGAATGCGCGAATCCGGATTCA
TTAGTACTGTTTCAGTGGCTGGATCGGAGTAGGGGTTCCTTTCTTGCTGTTGCTGCTGTA
TCAAACAAATGGGATTTTCGAGCTTTGATTACGACATATCGAGAGTTTTTTTGACACAAA
CGAAATACTAGTATCAATTTGATGCT