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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0110600-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:566502:568227:-1 gene:Os05g0110600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab5-interacting family protein. (Os05t0110600-01)
Sequence

ATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCGCGCAGGCGCAGCAGAACGGCGGCGCC
GGACACTCCAAGCTCGCCAGGTACTTCGACCCGGAGGCCTCCTGGGACAAGGATCAACTG
CTGGACGCCGTGCACTGGATCCGGCAGGTGCTCGGCCTCGCCTGCGGCCTGCTCTGGGGA
GCCGTCCCCCTCGTCGGCGCCATCTGGATCGCACTGTTTGTGACTATTTCTACTGGGCTC
GTTTACTGGTACTATGCATACCTGTTGAAGATTGATGAGGAAGACTTTGGAGGCCATGGA
GCACTACTTCAGGAGGGAATGTTTGCCTCTTTCACTCTTTTCCTGCTTTCATGGACACTC
ATATACAGTTTGGTTCACTTTTGA

Peptide Sequence

PEP ID

Os05t0110600-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:566502:568227:-1 gene:Os05g0110600 transcript:Os05t0110600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab5-interacting family protein. (Os05t0110600-01)
Sequence

MRKTKPSKQSRAQAQQNGGAGHSKLARYFDPEASWDKDQLLDAVHWIRQVLGLACGLLWG
AVPLVGAIWIALFVTISTGLVYWYYAYLLKIDEEDFGGHGALLQEGMFASFTLFLLSWTL
IYSLVHF

Transcript Sequence

Transcript ID

Os05t0110600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:566502:568227:-1 gene:Os05g0110600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Rab5-interacting family protein. (Os05t0110600-01)
Sequence

CCAACCAAACCAGCTCCATCCATAGACTTGTTGACTGCTCCCTCGCGATCCCATCTCCGC
CGCCGCCGCCGCCGCCGCCGAGCGAGATGAGGAAGACGAAGCCGTCGAAGCAGTCGCGCG
CGCAGGCGCAGCAGAACGGCGGCGCCGGACACTCCAAGCTCGCCAGGTACTTCGACCCGG
AGGCCTCCTGGGACAAGGATCAACTGCTGGACGCCGTGCACTGGATCCGGCAGGTGCTCG
GCCTCGCCTGCGGCCTGCTCTGGGGAGCCGTCCCCCTCGTCGGCGCCATCTGGATCGCAC
TGTTTGTGACTATTTCTACTGGGCTCGTTTACTGGTACTATGCATACCTGTTGAAGATTG
ATGAGGAAGACTTTGGAGGCCATGGAGCACTACTTCAGGAGGGAATGTTTGCCTCTTTCA
CTCTTTTCCTGCTTTCATGGACACTCATATACAGTTTGGTTCACTTTTGAGAAGCTCCTC
TGATGACATGTTGCCCATGGATGGAAGTTTGTGCACCATGTTTGGTCAGGAAGGAATCAC
CAGAACAGTGTAGATTAAGGGGGCCATTTAGAGCAAACTTTGTATTATGAAAACCGTTAA
AGGCAGTAATGTTGTTTCCTTTCAGAGTCCCAATGTAATTTTGATAGTATGGTTTTAACT
CAATGAGGTAGAACATTGCTTGTCTGAAAAACGTGCTTACCGAGTTAGAACATTTGTACT
GTATCATTCAATTGCATCCAGCCAATAAGCCTTTCT