Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0110300-02
CDS Infomation	cds chromosome:IRGSP-1.0:5:552060:561495:1 gene:Os05g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-01);Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-02)
Sequence	CTGCGCCTCCTCCTCATCGCCTCGCCGTCGCCGGAGAAGACAACCATGACCACCATCGCC GCGCGGATGCCGTTTGCGGGCCCACGCCTCAGGCCTCCCTGCAACCTCACCGCCTCGAGG CCGGGTCCCAGGAGGGCCGGGCTGGCCGTCGTCTCCGCCGCCGCCGGTGGCCCGCTTCCC ACCGTGCTCGTCACCGGCGCAGGCGGCCGAACAGGCCAGATTGTGTACAAGAAGCTCAAG GAGAGGGCAGACCAATTTGTGGGGAGAGGGCTAGTCAGGACTGAAGAGAGCAAAGCCAAG ATTGGGGGCGCTGCCGACGTGTTCGTCGGGGACATAAGAGATCCCGCGAGCATTGCTCCT GCCATTGACGGCATCGACGCGCTTATCATCCTCACCAGTGCGGTTCCGAAAATGAAGCCT GGGTTTGATCCCAGCAAGGGGGGACGCCCAGAGTTCTACTTTGAGGATGGCTCTTATCCT GAGCAGGTGGATTGGATTGGCCAGAGGAATCAAATAGATGCTGCCAAGAGCATTGGTGTA AAACAGGTGGTTTTGGTTGGATCCATGGGCGGCACAGATGTCAATCACCCACTAAATAAG TTAGGAAATGCAAATATACTGGTTTGGAAGAGGAAGGCGGAGCAGTACCTAGCAGACTCA GGTCTACCATATACAATTATAAGGGCTGGAGGATTACAGGATAAAGATGGTGGTGTGCGG GAGTTGCTTGTTGGGAAGGATGATGAGATCTTGAAGACAGAAACAAAAACTATTACCAGA GCAGATGTTGCAGAAGTTTGTTTACAGGCCTTGCTATTTGAGGAGGCAAGGTTTAAGGCA TTTGATCTGGCATCAAAACCTGAAGGTGAAGGAGTACCTACAACTGATTTCAGGGCTCTT TTTTCGCAAGTTAATAGTCGCTTCTAA

Peptide Sequence

PEP ID	Os05t0110300-02
PEP Infomation	pep chromosome:IRGSP-1.0:5:552060:561495:1 gene:Os05g0110300 transcript:Os05t0110300-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-01);Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-02)
Sequence	LRLLLIASPSPEKTTMTTIAARMPFAGPRLRPPCNLTASRPGPRRAGLAVVSAAAGGPLP TVLVTGAGGRTGQIVYKKLKERADQFVGRGLVRTEESKAKIGGAADVFVGDIRDPASIAP AIDGIDALIILTSAVPKMKPGFDPSKGGRPEFYFEDGSYPEQVDWIGQRNQIDAAKSIGV KQVVLVGSMGGTDVNHPLNKLGNANILVWKRKAEQYLADSGLPYTIIRAGGLQDKDGGVR ELLVGKDDEILKTETKTITRADVAEVCLQALLFEEARFKAFDLASKPEGEGVPTTDFRAL FSQVNSRF

Transcript Sequence

Transcript ID	Os05t0110300-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:552060:561495:1 gene:Os05g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-01);Similar to NAD-dependent epimerase/dehydratase. (Os05t0110300-02)
Sequence	GCTGCGCCTCCTCCTCATCGCCTCGCCGTCGCCGGAGAAGACAACCATGACCACCATCGC CGCGCGGATGCCGTTTGCGGGCCCACGCCTCAGGCCTCCCTGCAACCTCACCGCCTCGAG GCCGGGTCCCAGGAGGGCCGGGCTGGCCGTCGTCTCCGCCGCCGCCGGTGGCCCGCTTCC CACCGTGCTCGTCACCGGCGCAGGCGGCCGAACAGGCCAGATTGTGTACAAGAAGCTCAA GGAGAGGGCAGACCAATTTGTGGGGAGAGGGCTAGTCAGGACTGAAGAGAGCAAAGCCAA GATTGGGGGCGCTGCCGACGTGTTCGTCGGGGACATAAGAGATCCCGCGAGCATTGCTCC TGCCATTGACGGCATCGACGCGCTTATCATCCTCACCAGTGCGGTTCCGAAAATGAAGCC TGGGTTTGATCCCAGCAAGGGGGGACGCCCAGAGTTCTACTTTGAGGATGGCTCTTATCC TGAGCAGGTGGATTGGATTGGCCAGAGGAATCAAATAGATGCTGCCAAGAGCATTGGTGT AAAACAGGTGGTTTTGGTTGGATCCATGGGCGGCACAGATGTCAATCACCCACTAAATAA GTTAGGAAATGCAAATATACTGGTTTGGAAGAGGAAGGCGGAGCAGTACCTAGCAGACTC AGGTCTACCATATACAATTATAAGGGCTGGAGGATTACAGGATAAAGATGGTGGTGTGCG GGAGTTGCTTGTTGGGAAGGATGATGAGATCTTGAAGACAGAAACAAAAACTATTACCAG AGCAGATGTTGCAGAAGTTTGTTTACAGGCCTTGCTATTTGAGGAGGCAAGGTTTAAGGC ATTTGATCTGGCATCAAAACCTGAAGGTGAAGGAGTACCTACAACTGATTTCAGGGCTCT TTTTTCGCAAGTTAATAGTCGCTTCTAAGAAGTATAATCTGTCAACGAGGCACAATATTT GTGATGGAATAATATGAAGTGTGTATTGAGTGAGGAGGCTCCTGATGGAAGAGCTCAAGA ACATTGTTGTCTGCTAATTATGGAAAACAGGCAAGTAGTTAAAGTAGACAAACACGCACC TTACTTATCAGCAGTTCCAATTCAGCAACAACATCATATATAGGTTCCTTGAGACACAGA AGTGAAGGAAGAGGGGCATGGGCCATGTTCATTTCAGATTATATAGAGATCATGTTGTCC CCATGAAATGAAGGTGGTTTTCCAATTTCGGTAGCTAATGTTTGGTAGTGAGACCAGTGT CGATGTAAACTAAAATCTTTGTATGTATCTTTCTTTCAGGGTTCAGATTGCTCCACCGTT TTTTGGGGGGATATTCTTGATGCAATATAAAAAAAGGCGAATATTAGGGATGGCTTGA