Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0108600-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:486058:488356:1 gene:Os05g0108600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xylem cysteine proteinase 2 precursor (EC 3.4.22.-) (AtXCP2). (Os05t0108600-01)
Sequence	ATGGAGACGAAGGTGACCGTGGGCGTCGTCCTCCTGCTGCTGTGCCTGTGCGGCGGCGCC GCGTGCGCCGCCGGCCGCAGCGGCGGCGAGTTCTCCATTGTCGGGTACTCGGAGGAGGAC CTGGCGTCGCACGACCGGCTGATCGAGCTGTTCGAGAAGTGGGTGGCAAAGTACCGGAAG GCGTACGCGAGCTTCGAGGAGAAGGTGAGGAGGTTCGAGGTGTTCAAGGACAACCTCAAC CACATCGACGACATCAACAAGAAGGTCACCAGCTACTGGCTGGGGCTCAACGAGTTCGCC GACCTCACCCACGACGAGTTCAAGGCGACCTACCTCGGCCTCACGCCGCCGCCGACGAGG TCGAACAGCAAGCACTACTCGTCGGAGGAGTTCAGGTACGGGAAGATGAGCAACGGCGAG GTGCCGAAGGAGATGGACTGGAGGAAGAAGAACGCGGTGACGGAGGTGAAGAACCAGGGG CAGTGCGGCAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGGGATCAACGCGATC GTGACGGGGAACCTGACGTCGCTGTCGGAGCAGGAGCTGATCGACTGCAGCACGGACGGG AACAACGGGTGCAATGGCGGCCTCATGGACTACGCCTTCTCCTACATCGCCTCCACCGGC GGGCTGCGCACGGAGGAGGCGTACCCGTACGCCATGGAGGAGGGCGACTGCGACGAGGGG AAGGGCGCGGCGGTGGTGACCATCTCCGGGTACGAGGACGTGCCGGCCAACGACGAGCAG GCGCTGGTGAAGGCGTTGGCGCATCAGCCTGTCAGCGTCGCCATTGAAGCATCCGGTCGC CACTTCCAGTTCTACAGCGGGGGTGTGTTTGATGGTCCATGCGGTGAGCAACTGGATCAC GGTGTGACGGCCGTTGGATATGGTACAAGCAAGGGCCAAGATTACATCATCGTGAAGAAC TCATGGGGCCCACATTGGGGCGAGAAGGGGTACATCCGCATGAAGAGGGGCACTGGCAAG GGTGAAGGTCTATGTGGCATCAACAAGATGGCCTCTTACCCCACCAAGGACAACTAA

Peptide Sequence

PEP ID	Os05t0108600-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:486058:488356:1 gene:Os05g0108600 transcript:Os05t0108600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xylem cysteine proteinase 2 precursor (EC 3.4.22.-) (AtXCP2). (Os05t0108600-01)
Sequence	METKVTVGVVLLLLCLCGGAACAAGRSGGEFSIVGYSEEDLASHDRLIELFEKWVAKYRK AYASFEEKVRRFEVFKDNLNHIDDINKKVTSYWLGLNEFADLTHDEFKATYLGLTPPPTR SNSKHYSSEEFRYGKMSNGEVPKEMDWRKKNAVTEVKNQGQCGSCWAFSTVAAVEGINAI VTGNLTSLSEQELIDCSTDGNNGCNGGLMDYAFSYIASTGGLRTEEAYPYAMEEGDCDEG KGAAVVTISGYEDVPANDEQALVKALAHQPVSVAIEASGRHFQFYSGGVFDGPCGEQLDH GVTAVGYGTSKGQDYIIVKNSWGPHWGEKGYIRMKRGTGKGEGLCGINKMASYPTKDN

Transcript Sequence

Transcript ID	Os05t0108600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:486058:488356:1 gene:Os05g0108600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Xylem cysteine proteinase 2 precursor (EC 3.4.22.-) (AtXCP2). (Os05t0108600-01)
Sequence	TCAGAAACAGTTTCTTTCGTCTTCAGTTAAAAAAAGAAGAAGGAGAAGAGGAAAAATTCA GACAGAGATCGACATGGAGACGAAGGTGACCGTGGGCGTCGTCCTCCTGCTGCTGTGCCT GTGCGGCGGCGCCGCGTGCGCCGCCGGCCGCAGCGGCGGCGAGTTCTCCATTGTCGGGTA CTCGGAGGAGGACCTGGCGTCGCACGACCGGCTGATCGAGCTGTTCGAGAAGTGGGTGGC AAAGTACCGGAAGGCGTACGCGAGCTTCGAGGAGAAGGTGAGGAGGTTCGAGGTGTTCAA GGACAACCTCAACCACATCGACGACATCAACAAGAAGGTCACCAGCTACTGGCTGGGGCT CAACGAGTTCGCCGACCTCACCCACGACGAGTTCAAGGCGACCTACCTCGGCCTCACGCC GCCGCCGACGAGGTCGAACAGCAAGCACTACTCGTCGGAGGAGTTCAGGTACGGGAAGAT GAGCAACGGCGAGGTGCCGAAGGAGATGGACTGGAGGAAGAAGAACGCGGTGACGGAGGT GAAGAACCAGGGGCAGTGCGGCAGCTGCTGGGCGTTCTCGACGGTGGCGGCGGTGGAGGG GATCAACGCGATCGTGACGGGGAACCTGACGTCGCTGTCGGAGCAGGAGCTGATCGACTG CAGCACGGACGGGAACAACGGGTGCAATGGCGGCCTCATGGACTACGCCTTCTCCTACAT CGCCTCCACCGGCGGGCTGCGCACGGAGGAGGCGTACCCGTACGCCATGGAGGAGGGCGA CTGCGACGAGGGGAAGGGCGCGGCGGTGGTGACCATCTCCGGGTACGAGGACGTGCCGGC CAACGACGAGCAGGCGCTGGTGAAGGCGTTGGCGCATCAGCCTGTCAGCGTCGCCATTGA AGCATCCGGTCGCCACTTCCAGTTCTACAGCGGGGGTGTGTTTGATGGTCCATGCGGTGA GCAACTGGATCACGGTGTGACGGCCGTTGGATATGGTACAAGCAAGGGCCAAGATTACAT CATCGTGAAGAACTCATGGGGCCCACATTGGGGCGAGAAGGGGTACATCCGCATGAAGAG GGGCACTGGCAAGGGTGAAGGTCTATGTGGCATCAACAAGATGGCCTCTTACCCCACCAA GGACAACTAAACTCCTACTACTAAATAACTCAATTGAATCAACACATGAGGATCATACAT ATGATGGTCCTTCAAAGTTTCTCTCTTCTCCTCTTGTTTTATTAGCCTTTAATTCCACTG TTTTTTCTTCTTTCCAAAGATTTGGAGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG AGAGAAGCACAAGCTGTTTGTTTGTATTCGATTTTCTTTTGCGCGCTTTGAAATCATCGA TGAAATAATAAATGTCAGAAGCTTCTTTT