Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0108100-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:453992:458256:-1 gene:Os05g0108100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os05t0108100-01)
Sequence	ATGGGAAAACTTGCAGCTGTTGTTCGCAGTGTACTTAGATTAACAAATGAAAGCATGAGG ATTGTTATGGTAACAATTATTGGAGTGCTCTTGGGCTTCTTCATTGGAATTTCATTCCCA TCAGTCAGCATAACAAAGCTTCACTTTCCTTCTAGCTTTGTATCATACATAGAAGACAGA AACTCTGGGCTCACAACACAAGCTTTGCTTAATCACGCCTGGACTTCCGCCCGAAATGCA AGGGAAAACAGTTCTGAACCAAGTTCAAACACTACTTTGAAGATTTATGTCCCAACGAAC CCCAAGGGTGCAGAGAGACTAGCACCAGCTATTGTTGTGCCAGAAACTGACTTCCATTTG CGCAGGTTATGGGGAGAACCAAGTGAGGACCTGCCCTTCAAACCAAAGTACCTTGTTACT TTCACTGTTGGATATGCACAGAAAGAAAATATCAACAGAGCAGTGAAGAAGTTCTCTGAC AATTTTGCTATTCTGTTGTTCCATTATGATGGTCGGGTGAGTGAGTGGGACGAGTTTGAG TGGTCGAAACGAGCCATCCATATAAGTGCCAGGAAACAAACTAAGTGGTGGTATGCCAAA AGATTCCTGCATCCTGATATTGTGGCAGCTTATGAGTACATATTCATCTGGGATGAGGAC CTTGGGGTGGAGCATTTCAATGCGGAGGAATACATCAAACTTGTCAAGAAATACCATCTG GAGATCTCTCAACCTGGTTTAGAGCCTGATCGGGGATTGACATGGCAGATGACAAAAAGA AGAGGTGACCGCGAGGTCCACAAGGTTACAGAGGAGAGGCCGGGCTGGTGTTCTGACCCT CATCTTCCGCCTTGTGCTGCCTTTGTTGAAATAATGGCTCCAGTCTTCTCTAGAGATGCA TGGAGATGTGTATGGCATATGATTCAGAATGACTTGGTTCATGGATGGGGCCTTGATTTT GCTCTCAGGAAATGCGTGGAGCCTGCTCACGAAAAGATTGGGGTTGTTGATTCACAGTGG ATTGTTCACCAAGTGGTTCCATCTCTCGGGAACCAGGGCAAGTCAGAGAATGGAAGACCA GCATGGGAAGGGGTGAGGGCGCGGTGCAGGAAGGAATGGGGGATGTTTCAGACGAGAATG GCGGAGGCGGAGAAGGCGTACTACAAGATGATGGGCATCACCCCTCCGAACTCCACACTG GTGTAG

Peptide Sequence

PEP ID	Os05t0108100-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:453992:458256:-1 gene:Os05g0108100 transcript:Os05t0108100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os05t0108100-01)
Sequence	MGKLAAVVRSVLRLTNESMRIVMVTIIGVLLGFFIGISFPSVSITKLHFPSSFVSYIEDR NSGLTTQALLNHAWTSARNARENSSEPSSNTTLKIYVPTNPKGAERLAPAIVVPETDFHL RRLWGEPSEDLPFKPKYLVTFTVGYAQKENINRAVKKFSDNFAILLFHYDGRVSEWDEFE WSKRAIHISARKQTKWWYAKRFLHPDIVAAYEYIFIWDEDLGVEHFNAEEYIKLVKKYHL EISQPGLEPDRGLTWQMTKRRGDREVHKVTEERPGWCSDPHLPPCAAFVEIMAPVFSRDA WRCVWHMIQNDLVHGWGLDFALRKCVEPAHEKIGVVDSQWIVHQVVPSLGNQGKSENGRP AWEGVRARCRKEWGMFQTRMAEAEKAYYKMMGITPPNSTLV

Transcript Sequence

Transcript ID	Os05t0108100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:453992:458256:-1 gene:Os05g0108100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF707 family protein. (Os05t0108100-01)
Sequence	CTTTGGTTCCTTCTTCTTCCATTCCATTGTGTTGATGAGTTGAGTTGGCTCATCTCATCG TCGCCGTCCTTGAATTGCCGCCTCCCATCCCACGAATTCCGCCCCTCCCACCCTCCTGAG ATCTCTCTCTCTCCCCCACCTCCGTATTTAGGTAGGCGGCGGGCGCATCACGTTCTATTG CCCCCTCCTGCCCGCCGCCGCCGCCGCACAGCCGGCGATCGAGCGGAATTCCCATTCCTT TCCGCCCGGTTTCCGGCGCTGCCGCCCCCCTCTTACCATCCCGGGGGGGCCCAGAGGCCA GGAGCTGTCGCCGGAGGATTTCAATTTTTCGGAGCCATTTGATGCTAATGCCACACCACC ACTCCTGCTAAAGCTGCCCTCATTATGAACTCGCTGGACAATGAGTAGCAATTGCACATT GCTGATTTCCATCTCCTGCGGTTACATTCGTACACGACAGCATGGGAAAACTTGCAGCTG TTGTTCGCAGTGTACTTAGATTAACAAATGAAAGCATGAGGATTGTTATGGTAACAATTA TTGGAGTGCTCTTGGGCTTCTTCATTGGAATTTCATTCCCATCAGTCAGCATAACAAAGC TTCACTTTCCTTCTAGCTTTGTATCATACATAGAAGACAGAAACTCTGGGCTCACAACAC AAGCTTTGCTTAATCACGCCTGGACTTCCGCCCGAAATGCAAGGGAAAACAGTTCTGAAC CAAGTTCAAACACTACTTTGAAGATTTATGTCCCAACGAACCCCAAGGGTGCAGAGAGAC TAGCACCAGCTATTGTTGTGCCAGAAACTGACTTCCATTTGCGCAGGTTATGGGGAGAAC CAAGTGAGGACCTGCCCTTCAAACCAAAGTACCTTGTTACTTTCACTGTTGGATATGCAC AGAAAGAAAATATCAACAGAGCAGTGAAGAAGTTCTCTGACAATTTTGCTATTCTGTTGT TCCATTATGATGGTCGGGTGAGTGAGTGGGACGAGTTTGAGTGGTCGAAACGAGCCATCC ATATAAGTGCCAGGAAACAAACTAAGTGGTGGTATGCCAAAAGATTCCTGCATCCTGATA TTGTGGCAGCTTATGAGTACATATTCATCTGGGATGAGGACCTTGGGGTGGAGCATTTCA ATGCGGAGGAATACATCAAACTTGTCAAGAAATACCATCTGGAGATCTCTCAACCTGGTT TAGAGCCTGATCGGGGATTGACATGGCAGATGACAAAAAGAAGAGGTGACCGCGAGGTCC ACAAGGTTACAGAGGAGAGGCCGGGCTGGTGTTCTGACCCTCATCTTCCGCCTTGTGCTG CCTTTGTTGAAATAATGGCTCCAGTCTTCTCTAGAGATGCATGGAGATGTGTATGGCATA TGATTCAGAATGACTTGGTTCATGGATGGGGCCTTGATTTTGCTCTCAGGAAATGCGTGG AGCCTGCTCACGAAAAGATTGGGGTTGTTGATTCACAGTGGATTGTTCACCAAGTGGTTC CATCTCTCGGGAACCAGGGCAAGTCAGAGAATGGAAGACCAGCATGGGAAGGGGTGAGGG CGCGGTGCAGGAAGGAATGGGGGATGTTTCAGACGAGAATGGCGGAGGCGGAGAAGGCGT ACTACAAGATGATGGGCATCACCCCTCCGAACTCCACACTGGTGTAGATCTAAGCTAGGC TGATTCTTCATCTTCATCTTCACTCCCATCTCTGCCTCTGTCTGAATGACGAGGATTCTG ATGTGTTTTACCTGCTGTACAGACAGTTCTGATGAACTGATGAGTGTGTAGGTAGGTGGT CAGATAGAGTGTGGATTGGATGGTGATGATTGTAGAGCATACATTTACACATGAGGGAGG GAGGGCCATCGATCATGAGGAGGGTGTTATACATACCATCTATAAAATCGATTATTTTGT GTTTTTGTGGTGGT