Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0108000-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:448854:453209:-1 gene:Os05g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase B family protein. (Os05t0108000-01)
Sequence	ATGCTTCGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCC TCCTCGCCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTAC CCGCTCTACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCC GCCGCCGATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGG TACCTCCGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCC TCCTCCTCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGG CTGCACGCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAG GACAAGCACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTC GACAACGCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGC CTCGTCTTCTTCGACGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGAT GGCGAGGATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAG AAAGGCCCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAG GTGAGGCACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTG CCGCCGAGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGG ACTTCATTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCAT GCTGGTACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACC AAAGTTGTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGA GAAGCTACATCAACCTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCATGGGAACAC ATTAAAGATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTT CCTCCAATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGG GGTGAAACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGC AGTTTAGAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATT CGATCCCTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTG CGGAGAGACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAG GAACAAATCACAAAGGGATATTTATGA

Peptide Sequence

PEP ID	Os05t0108000-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:448854:453209:-1 gene:Os05g0108000 transcript:Os05t0108000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase B family protein. (Os05t0108000-01)
Sequence	MLRTGGGARATAAAQLLSSSSSPPPLRLPRRFLSLTATPYPLYYDLLLYRPSYPNPPKSS AADDRHTRPTDDHLDRAKRRYLRKRRSRLLPDPDATTAKPSSSSSSEFVELKPEVVDFPR LHAREEALYFHDAFALPWEKDKHYRMLYRLEKKYFPDQSLDNAFVPADASPPSSDAADKG LVFFDDDDNNKEAEVKKKKDGEDRGEVLERKVEDFFRSLKKGPGHGEANVMKAKKKEPPQ VRHEADEWPQPHLASRRTELPPRWNGPTGTVVLIDKPKGWTSFTVCGKLRRLVNVQKVGH AGTLDPMATGLLIVCVGKATKVVDRYQGMVKGYSGVFRLGEATSTWDADSPVIQREPWEH IKDEDIRKVAASFRGEIWQVPPMFSAIKVGGEKMYDKARRGETVELSPRRISIHQFDIER SLEDRQNLIFRVICSKGTYIRSLCADLGKALGSCAHLTALRRDSIGDFSVNDAWSFAELE EQITKGYL

Transcript Sequence

Transcript ID	Os05t0108000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:448854:453209:-1 gene:Os05g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding description:tRNA pseudouridine synthase B family protein. (Os05t0108000-01)
Sequence	GATCGCCGTTGGATCTCCCCTCCTCGCCGTCACTCGCTGCCGGATAAGGAACCAATGCTT CGCACCGGCGGCGGAGCGCGAGCCACGGCGGCGGCGCAGCTGCTCTCCTCCTCCTCCTCG CCGCCGCCGCTCCGCCTCCCCCGACGCTTCCTCTCGCTGACGGCCACCCCCTACCCGCTC TACTACGACCTCCTCCTCTACCGCCCCTCCTACCCCAATCCGCCCAAATCCTCCGCCGCC GATGACCGCCACACCCGGCCCACCGACGACCACCTCGACCGCGCCAAGCGCCGGTACCTC CGGAAGCGCCGCAGCCGCCTCCTCCCCGACCCCGACGCCACCACCGCCAAGCCCTCCTCC TCCTCCTCGTCGGAGTTCGTGGAGCTGAAGCCGGAGGTGGTGGACTTCCCGCGGCTGCAC GCGCGGGAGGAGGCGCTCTACTTCCACGACGCGTTCGCGCTACCCTGGGAGAAGGACAAG CACTACCGCATGCTCTACCGCCTCGAGAAGAAGTACTTCCCGGACCAATCCCTCGACAAC GCCTTCGTCCCCGCCGACGCCTCGCCGCCTTCCTCCGACGCCGCCGACAAGGGCCTCGTC TTCTTCGACGACGACGATAACAACAAGGAGGCGGAGGTGAAGAAGAAGAAGGATGGCGAG GATCGAGGGGAGGTGTTGGAGAGGAAGGTGGAGGATTTCTTCAGGTCATTGAAGAAAGGC CCTGGCCATGGCGAGGCTAACGTGATGAAGGCGAAGAAGAAGGAGCCTCCGCAGGTGAGG CACGAGGCGGATGAATGGCCGCAGCCGCATCTCGCGAGCAGGAGAACGGAGCTGCCGCCG AGGTGGAACGGCCCGACCGGGACAGTCGTGCTCATCGACAAGCCCAAAGGCTGGACTTCA TTTACTGTTTGTGGAAAGCTGCGGCGATTAGTGAATGTGCAAAAGGTCGGGCATGCTGGT ACTCTGGATCCAATGGCAACTGGACTGTTGATTGTTTGTGTGGGTAAAGCAACCAAAGTT GTTGATAGATATCAAGGAATGGTTAAAGGCTATAGTGGTGTTTTTCGACTTGGAGAAGCT ACATCAACCTGGGATGCAGATTCACCAGTTATCCAGAGAGAACCATGGGAACACATTAAA GATGAAGATATTAGAAAGGTAGCAGCATCATTCAGGGGCGAGATATGGCAAGTTCCTCCA ATGTTTTCTGCCATTAAGGTTGGTGGTGAAAAAATGTATGACAAAGCAAGGAGGGGTGAA ACAGTAGAGCTTTCACCAAGGCGAATATCAATACACCAGTTTGATATTGAGCGCAGTTTA GAAGACAGACAAAATCTGATATTTCGAGTTATTTGCTCAAAAGGAACATATATTCGATCC CTCTGTGCAGATTTGGGGAAAGCGCTCGGAAGCTGTGCTCATTTAACTGCCTTGCGGAGA GACTCAATTGGCGACTTTTCAGTCAATGATGCTTGGAGTTTTGCTGAGCTGGAGGAACAA ATCACAAAGGGATATTTATGATTACTCACCATGCCATTTGGCAAAATTGCAGCCATCGTT GGGTTCAGTTTGAGTTTCAGCGCTTAGCGAACAATTGCTTTCTTCCAATCTTCCCTGGTA GGCAATTGGTCGTTGAGTACTGAGAAGCTATTAACCAACAGTAACGCTCAACCCAGAGAT CAGCACTTAATCTGACGTTTCAGACCTTGGGGGAAAGGAATTCATTCTGGTGTCCCTGGA CACTACGGATGTAGCAGCTTTATATATTGCAATGATGCATACCTGATGTAGCATGCATCC TAAATTTTGATGTGGAACATTGTCAACATTACGATGAAATAGAATGTGGTTATACTTGAT TATG