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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0107900-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:446567:448695:1 gene:Os05g0107900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought-induced 19-6 description:Similar to Protein DEHYDRATION-INDUCED 19 homolog 6. (Os05t0107900-01)
Sequence

GATGATGAGTGGTGGGAGTACATCCCTTGCCCCTTCTGCTACATTGAGGTGGAGGTTCAT
TTCCTTTGTGACCATCTCCAGGAGGAGCATTGCTTTGACATGAAAAATGCTGTGTGTCCA
ATCTGCGCCGACAACCTTGACAAGGACACTGATGAACATTTCAGGGTTCAGCACTCACAT
CTACTCAAGAGGAGGAAGTCTTCTTCTTTTTCTTGCAAGCCAAGCTCAGCAGCAGCTGAC
AAGGGATCATATGAAGAGGACTCCTACTTTGAAGCACCCTCACACTGCATGGGCAGGCCG
GCTCCTGATTCCTCTCCTGACCCTCTTCTCTCCCAGTTCATCTGCTGCAGCCTCGCTCCT
CCGGTCGATTCGCCGCGCCGCAGCGAAGCCGATGCCGAGGGCCATGGTTCATCTTCCTCA
GATGATCAAAAAAGGAGAGAGCAGGGTGTGATGGATGATGCATCAAAGGAGGAGCTTGAG
GAGAGGTTGCAGAGAATCGAGTTCGTGAAGCAGATGCTGATGACAACAATTGCTTATTAG

Peptide Sequence

PEP ID

Os05t0107900-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:446567:448695:1 gene:Os05g0107900 transcript:Os05t0107900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought-induced 19-6 description:Similar to Protein DEHYDRATION-INDUCED 19 homolog 6. (Os05t0107900-01)
Sequence

DDEWWEYIPCPFCYIEVEVHFLCDHLQEEHCFDMKNAVCPICADNLDKDTDEHFRVQHSH
LLKRRKSSSFSCKPSSAAADKGSYEEDSYFEAPSHCMGRPAPDSSPDPLLSQFICCSLAP
PVDSPRRSEADAEGHGSSSSDDQKRREQGVMDDASKEELEERLQRIEFVKQMLMTTIAY

Transcript Sequence

Transcript ID

Os05t0107900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:446567:448695:1 gene:Os05g0107900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:drought-induced 19-6 description:Similar to Protein DEHYDRATION-INDUCED 19 homolog 6. (Os05t0107900-01)
Sequence

TTGGTCACTTTGATCTCTTCTTGGTTGGTTGTTGAATGTTCTTTGGCCTGCCTGAGATGA
TGAGTGGTGGGAGTACATCCCTTGCCCCTTCTGCTACATTGAGGTGGAGGTTCATTTCCT
TTGTGACCATCTCCAGGAGGAGCATTGCTTTGACATGAAAAATGCTGTGTGTCCAATCTG
CGCCGACAACCTTGACAAGGACACTGATGAACATTTCAGGGTTCAGCACTCACATCTACT
CAAGAGGAGGAAGTCTTCTTCTTTTTCTTGCAAGCCAAGCTCAGCAGCAGCTGACAAGGG
ATCATATGAAGAGGACTCCTACTTTGAAGCACCCTCACACTGCATGGGCAGGCCGGCTCC
TGATTCCTCTCCTGACCCTCTTCTCTCCCAGTTCATCTGCTGCAGCCTCGCTCCTCCGGT
CGATTCGCCGCGCCGCAGCGAAGCCGATGCCGAGGGCCATGGTTCATCTTCCTCAGATGA
TCAAAAAAGGAGAGAGCAGGGTGTGATGGATGATGCATCAAAGGAGGAGCTTGAGGAGAG
GTTGCAGAGAATCGAGTTCGTGAAGCAGATGCTGATGACAACAATTGCTTATTAGAAGAC
TGTTTCTCTAGGGTTCATTTCGGCAGTTTGGGTAGGCTTTTCAGGATTTGGGACAAGTGC
AGAATGATGTGCCATTTAATTTATGCTGACCTTCGGCACATGTATACCTACAATGTTTGG
ATATCTATATAATCATCAATCGTAATCCTATCAATTT