Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0107700-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:437043:443269:1 gene:Os05g0107700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 5 description:Transcription factor IIA small subunit (Transcription factor IIA gamma subunit). (Os05t0107700-01)
Sequence	ATGGCCACCTTCGAGCTCTACCGGAGGTCCACCATTGGCATGTGCCTCACTGAGACGCTC GACGAGATGGTCTCCAGCGGCACCCTCAGCCCGGAGCTCGCCATTCAAGTTCTTGTCCAG TTTGATAAGTCTATGACGGAAGCCTTGGAGAACCAAGTCAAGAGCAAGGTTTCTATCAAG GGCCACCTGCACACTTACAGGTTCTGTGACAATGTATGGACATTCATCTTGACTGAAGCA TCATTCAAGAACGAGGAGACTACAGAACAAGTTGGCAAGGTGAAGATTGTGGCCTGTGAT TCCAAACTACTCAGCCAATAA

Peptide Sequence

PEP ID	Os05t0107700-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:437043:443269:1 gene:Os05g0107700 transcript:Os05t0107700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 5 description:Transcription factor IIA small subunit (Transcription factor IIA gamma subunit). (Os05t0107700-01)
Sequence	MATFELYRRSTIGMCLTETLDEMVSSGTLSPELAIQVLVQFDKSMTEALENQVKSKVSIK GHLHTYRFCDNVWTFILTEASFKNEETTEQVGKVKIVACDSKLLSQ

Transcript Sequence

Transcript ID	Os05t0107700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:437043:443269:1 gene:Os05g0107700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:XANTHOMONAS ORYZAE PV. ORYZAE RESISTANCE 5 description:Transcription factor IIA small subunit (Transcription factor IIA gamma subunit). (Os05t0107700-01)
Sequence	GTCTCCTCCGCTCCTCCTCTCCTTGCGCCAACAAGCCGACTCGCGATCTCCATCGGGCAA GAAGAGCAGAGCAGAGCAGGGGAGGGGATCCTGCAGATCTGGAAGAAGCTCTTAATTTCA GAGCCTTAACCTCTCTTAATACTACAAGTAACAACAGTTTTGTTGTTTGTTCCCCCCACC CCAAAAAGTTTAGGCGCACGCATCGCCCATGGCCACCTTCGAGCTCTACCGGAGGTCCAC CATTGGCATGTGCCTCACTGAGACGCTCGACGAGATGGTCTCCAGCGGCACCCTCAGCCC GGAGCTCGCCATTCAAGTTCTTGTCCAGTTTGATAAGTCTATGACGGAAGCCTTGGAGAA CCAAGTCAAGAGCAAGGTTTCTATCAAGGGCCACCTGCACACTTACAGGTTCTGTGACAA TGTATGGACATTCATCTTGACTGAAGCATCATTCAAGAACGAGGAGACTACAGAACAAGT TGGCAAGGTGAAGATTGTGGCCTGTGATTCCAAACTACTCAGCCAATAAATTGATAACTG CGAGGTCAGGGTTTGCCTGGTATTTGTTAGTCTCTTCTGCTAGACCTGGCTCCGCCTGAA GTGTACTGTACCACCACATTGTTTGTTTCATAATCAATGTGTGTCAATACAATCGTATGT GCTACCAGAGTATATCACAGCAGCAACTGTTTTAATTTGTATGCTTATGTAATTGTTATG CTACTGCTGTGTTGATAATGTGATATAAATGACTAAACGATGAGTAGTAGAAATTGTGCG GAGTCACCCTCCCCCTTCCTCATTTCTGAACCCTTTGGTTCTGTGTGACTCTTTGTATGT AACATGAACAAATACCTCCTTTCCCGTCTTTTTTTTGGATCCTATGTTAATGGTACCTTT ACATT