Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0106700-00
CDS Infomation

cds chromosome:IRGSP-1.0:5:362367:365961:1 gene:Os05g0106700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os05t0106700-00)
Sequence

CAGTACCGAGTAATATATGGACAGTATTATCTTCAATTTCTAGTTACCTGGAGATCAAAT
GTGACAAATATGCACACAAGGGGAGCATCTTCAGATGTTCTTAGAGCAAGCATTTCTAGT
GCACCTAGTACATCTAGCCATGGTTCTGCACAAGATGACTGTGATTCTTTAGGTGATGTC
TACGTGTGGGGTGAAGTTTTTTGCGAAAACTCTGTACGAGTTGGTTCTGATACTATAATT
AGATCAACGGAGAAGACTGATTTCCTACTCCCAAAGCCGTTGGAATCCAGATTAGTTCTT
GATGTTTATCATGTAGATTGTGGGGTCAGGCATGCTGCACTGGTCACAAGAAATGGAGAC
GTTTTCACATGGGGTGAAGATTCTGGAGGTCGCCTCGGACATGGAACACGAGAAGATTCT
GTCCATCCTCGTCTTGTTGAGTCTTTAGCGGCTTGCAATGTAGATTTTGTTGCTTGTGGG
GAGTTTCATACTTGCGCTGTGACAACAACAGGCGAACTATATACCTGGGGAGATGGAACT
CACAATGTTGGACTTCTAGGACATGGTACTGATGCAGGACATTGGATACCCAAGAGAATT
TCTGGAGCACTGGATGGTCTTCCAGTTGCTTATGTTTCTTGTGGAACCTGGCATACAGCC
TTGATTACATCGATGGGCCAATTGTTTACTTTTGGAGATGGTTCTTTCGGGGTATTAGGC
CATGGGAATCTAACAAGCATTTCATGTCCAAAGGAGGTAGAGTCACTCTCAGGGTTGAAA
ACAATAGCAGTTGCATGTGGTGTATGGCACACTGCAGCTATTGTGGAGGTCATTGTCACT
CACTCTAGTTCAAGTGTGTCTGCTGGAAAGCTATTCACCTGGGGAGATGGCGACAAGCAT
CGACTTGGCCATGGTGACAAGGAATCACGACTCAAGCCCACCTGTGTAGCTTCGCTTATT
GATTATGATTTTTACAGGGTAGCATGTGGTCACAGTCTTACTGTATGCTTGACAACTTCT
GGAAAAGTGTTGAGCATGGGTAATTCTGTTTATGGTCAGCTCGGAAATCCTAATTCAGAT
GGAAGGCTTCCATGTTTGGTCGAAGATAGGATTGCAGGTGAACATGTTCTCCAAGTTGCT
TGTGGATCCTACCATGTTGCAGTATTGACAGGTAGGAGTGAAGTTTTTACATGGGGAAAG
GGAGCTAATGGAAGATTAGGCCATGGAGATATAGAGGATCGGAAGGTACCTACACAGGTT
GAGGCACTGAAAGATAGAGCGGTTCGGCACATAGCATGTGGTGCAAACTTCACTGCTGCT
ATATGTCTTCACAAATGGGTTTCTGGAGCTGACCAATCACAGTGCTCATCATGTCAACAG
CCATTTGGATTTACTCGAAAGAGGCATAATTGCTATAATTGTGGACTTGTCCATTGTAAT
GCATGCACCTCAAGAAAGGCTTTGAGAGCAGCATTGGCTCCTAATCCAGGGAAACCTTAC
CGTGTTTGTGATTCTTGTTTCTTGAAATTGAAGAACGCCTTGGATTCTGATTCGTTTAAT
AAGAGGAAGGACATTGTTTCCCACCTTGCAGGTGAAAGCAATGGTGATACCAAAGCATCG
AAAACCATCTTGTCTAGCAATATGGATATAATTAGGAGTTTGGATAGCAAGGCAGCAAGA
CAGGGGAAGAAAACTGATGCATTGTCATTTCTCCGGACTCCTCAAGTTAGTTCACTACTG
CAGCTGAGAGATATTGCTTTGTCTGGTAGCGCAGATATGAACAGATCAGTTCCAAGAGCA
GTGCGTACATCAGCAGTTCGGTCAGTAACCACTTCAAGAGCTGTTTCCCCTTTCTCTCGA
AAGTCTAGTCCACCACGTTCAACCACACCAGTTCCAACAACTCATGGCCTTTCTTTCTCA
AAAAGTGCTACCGATAATCTGGCAAAAACAAATGAGCTCTTAAACCAGGAAATCGATAGG
CTGCATGCGCAAGTTGATAACCTCAGACATCGTTGTGAGCATCAAGAAGTTGAGCTGCAT
AAATCAGCCAAGAAAGTTCAGGAGGCCATGACACTAGTTGCAGAGGAATCTGCAAAATCT
AAAGCTGCAAAAGAGGTTATCAAATCTCTAACAGCGCAGCTGAAGGATATGGCTGAGCGG
ATACCACCAGAACAGGGCACTTACGATGTCAGTGAGGCAAAGCCAGTGCACGTTCCGAAT
GGCATTGATTCACATATTGCAATCTACTCTAGCATAAACGTAGCTCACCAGCCACAGAAT
GAGCTCCTCAATGCTTCAAATGCGCAAAGCCTGAACTCTGGACGATCATTGCATCCAAAT
GGAATCTCAAGCCAACACAGGTTACTAGGTAATGCTACCGAAGCTAGTGAAGGCAGCGCT
CAAAGCCATCGAATTACTAGTCCCTGCAAGTTGGATGTTCCTCATCGAAGAGCGCACAGC
AACAGCGACGATATGCTGACTGCGAGTCATAGAGGGGATGATAATGTGAGCATAGATGCA
ATGTCCCTTCAGAATGGTGAGGATGGATACAAGCCTCGAGGCACAGTATCATCAATATCC
AGCAGCCAAGTTCAGGCCGAATGGATCGAGCAGTATGAACCAGGTGTATACATAACACTC
ACAACACTCTTGGATGGGACTCGGGATCTGAAGAGGGTTCGTTTCAGCCGGAGACGTTTT
GGGGAGCATCAGGCTGAGAAGTGGTGGAACGAGAACCGTGAGAAGGTGTACGAGAGATAC
AACGTGAGGAGCTCTGAAAGAGTGTCTTCTTCTTCAGCAGCCTCCACCCGCTCAGCCTAT
TGA

Peptide Sequence

PEP ID

Os05t0106700-00
PEP Infomation

pep chromosome:IRGSP-1.0:5:362367:365961:1 gene:Os05g0106700 transcript:Os05t0106700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os05t0106700-00)
Sequence

QYRVIYGQYYLQFLVTWRSNVTNMHTRGASSDVLRASISSAPSTSSHGSAQDDCDSLGDV
YVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGD
VFTWGEDSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGDGT
HNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTWHTALITSMGQLFTFGDGSFGVLG
HGNLTSISCPKEVESLSGLKTIAVACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKH
RLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMGNSVYGQLGNPNSD
GRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRSEVFTWGKGANGRLGHGDIEDRKVPTQV
EALKDRAVRHIACGANFTAAICLHKWVSGADQSQCSSCQQPFGFTRKRHNCYNCGLVHCN
ACTSRKALRAALAPNPGKPYRVCDSCFLKLKNALDSDSFNKRKDIVSHLAGESNGDTKAS
KTILSSNMDIIRSLDSKAARQGKKTDALSFLRTPQVSSLLQLRDIALSGSADMNRSVPRA
VRTSAVRSVTTSRAVSPFSRKSSPPRSTTPVPTTHGLSFSKSATDNLAKTNELLNQEIDR
LHAQVDNLRHRCEHQEVELHKSAKKVQEAMTLVAEESAKSKAAKEVIKSLTAQLKDMAER
IPPEQGTYDVSEAKPVHVPNGIDSHIAIYSSINVAHQPQNELLNASNAQSLNSGRSLHPN
GISSQHRLLGNATEASEGSAQSHRITSPCKLDVPHRRAHSNSDDMLTASHRGDDNVSIDA
MSLQNGEDGYKPRGTVSSISSSQVQAEWIEQYEPGVYITLTTLLDGTRDLKRVRFSRRRF
GEHQAEKWWNENREKVYERYNVRSSERVSSSSAASTRSAY

Transcript Sequence

Transcript ID

Os05t0106700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:362367:365961:1 gene:Os05g0106700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to PRAF1; Ran GTPase binding / chromatin binding / zinc ion binding. (Os05t0106700-00)
Sequence

TTGATGATATCCAACTCATTTTAGCGTATAGTTTGATCAGCATTTTGTTTGCAAGCACTC
CTGACAGTACCGAGTAATATATGGACAGTATTATCTTCAATTTCTAGTTACCTGGAGATC
AAATGTGACAAATATGCACACAAGGGGAGCATCTTCAGATGTTCTTAGAGCAAGCATTTC
TAGTGCACCTAGTACATCTAGCCATGGTTCTGCACAAGATGACTGTGATTCTTTAGGTGA
TGTCTACGTGTGGGGTGAAGTTTTTTGCGAAAACTCTGTACGAGTTGGTTCTGATACTAT
AATTAGATCAACGGAGAAGACTGATTTCCTACTCCCAAAGCCGTTGGAATCCAGATTAGT
TCTTGATGTTTATCATGTAGATTGTGGGGTCAGGCATGCTGCACTGGTCACAAGAAATGG
AGACGTTTTCACATGGGGTGAAGATTCTGGAGGTCGCCTCGGACATGGAACACGAGAAGA
TTCTGTCCATCCTCGTCTTGTTGAGTCTTTAGCGGCTTGCAATGTAGATTTTGTTGCTTG
TGGGGAGTTTCATACTTGCGCTGTGACAACAACAGGCGAACTATATACCTGGGGAGATGG
AACTCACAATGTTGGACTTCTAGGACATGGTACTGATGCAGGACATTGGATACCCAAGAG
AATTTCTGGAGCACTGGATGGTCTTCCAGTTGCTTATGTTTCTTGTGGAACCTGGCATAC
AGCCTTGATTACATCGATGGGCCAATTGTTTACTTTTGGAGATGGTTCTTTCGGGGTATT
AGGCCATGGGAATCTAACAAGCATTTCATGTCCAAAGGAGGTAGAGTCACTCTCAGGGTT
GAAAACAATAGCAGTTGCATGTGGTGTATGGCACACTGCAGCTATTGTGGAGGTCATTGT
CACTCACTCTAGTTCAAGTGTGTCTGCTGGAAAGCTATTCACCTGGGGAGATGGCGACAA
GCATCGACTTGGCCATGGTGACAAGGAATCACGACTCAAGCCCACCTGTGTAGCTTCGCT
TATTGATTATGATTTTTACAGGGTAGCATGTGGTCACAGTCTTACTGTATGCTTGACAAC
TTCTGGAAAAGTGTTGAGCATGGGTAATTCTGTTTATGGTCAGCTCGGAAATCCTAATTC
AGATGGAAGGCTTCCATGTTTGGTCGAAGATAGGATTGCAGGTGAACATGTTCTCCAAGT
TGCTTGTGGATCCTACCATGTTGCAGTATTGACAGGTAGGAGTGAAGTTTTTACATGGGG
AAAGGGAGCTAATGGAAGATTAGGCCATGGAGATATAGAGGATCGGAAGGTACCTACACA
GGTTGAGGCACTGAAAGATAGAGCGGTTCGGCACATAGCATGTGGTGCAAACTTCACTGC
TGCTATATGTCTTCACAAATGGGTTTCTGGAGCTGACCAATCACAGTGCTCATCATGTCA
ACAGCCATTTGGATTTACTCGAAAGAGGCATAATTGCTATAATTGTGGACTTGTCCATTG
TAATGCATGCACCTCAAGAAAGGCTTTGAGAGCAGCATTGGCTCCTAATCCAGGGAAACC
TTACCGTGTTTGTGATTCTTGTTTCTTGAAATTGAAGAACGCCTTGGATTCTGATTCGTT
TAATAAGAGGAAGGACATTGTTTCCCACCTTGCAGGTGAAAGCAATGGTGATACCAAAGC
ATCGAAAACCATCTTGTCTAGCAATATGGATATAATTAGGAGTTTGGATAGCAAGGCAGC
AAGACAGGGGAAGAAAACTGATGCATTGTCATTTCTCCGGACTCCTCAAGTTAGTTCACT
ACTGCAGCTGAGAGATATTGCTTTGTCTGGTAGCGCAGATATGAACAGATCAGTTCCAAG
AGCAGTGCGTACATCAGCAGTTCGGTCAGTAACCACTTCAAGAGCTGTTTCCCCTTTCTC
TCGAAAGTCTAGTCCACCACGTTCAACCACACCAGTTCCAACAACTCATGGCCTTTCTTT
CTCAAAAAGTGCTACCGATAATCTGGCAAAAACAAATGAGCTCTTAAACCAGGAAATCGA
TAGGCTGCATGCGCAAGTTGATAACCTCAGACATCGTTGTGAGCATCAAGAAGTTGAGCT
GCATAAATCAGCCAAGAAAGTTCAGGAGGCCATGACACTAGTTGCAGAGGAATCTGCAAA
ATCTAAAGCTGCAAAAGAGGTTATCAAATCTCTAACAGCGCAGCTGAAGGATATGGCTGA
GCGGATACCACCAGAACAGGGCACTTACGATGTCAGTGAGGCAAAGCCAGTGCACGTTCC
GAATGGCATTGATTCACATATTGCAATCTACTCTAGCATAAACGTAGCTCACCAGCCACA
GAATGAGCTCCTCAATGCTTCAAATGCGCAAAGCCTGAACTCTGGACGATCATTGCATCC
AAATGGAATCTCAAGCCAACACAGGTTACTAGGTAATGCTACCGAAGCTAGTGAAGGCAG
CGCTCAAAGCCATCGAATTACTAGTCCCTGCAAGTTGGATGTTCCTCATCGAAGAGCGCA
CAGCAACAGCGACGATATGCTGACTGCGAGTCATAGAGGGGATGATAATGTGAGCATAGA
TGCAATGTCCCTTCAGAATGGTGAGGATGGATACAAGCCTCGAGGCACAGTATCATCAAT
ATCCAGCAGCCAAGTTCAGGCCGAATGGATCGAGCAGTATGAACCAGGTGTATACATAAC
ACTCACAACACTCTTGGATGGGACTCGGGATCTGAAGAGGGTTCGTTTCAGCCGGAGACG
TTTTGGGGAGCATCAGGCTGAGAAGTGGTGGAACGAGAACCGTGAGAAGGTGTACGAGAG
ATACAACGTGAGGAGCTCTGAAAGAGTGTCTTCTTCTTCAGCAGCCTCCACCCGCTCAGC
CTATTGA