Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os05t0105900-01
CDS Infomation	cds chromosome:IRGSP-1.0:5:317219:320666:1 gene:Os05g0105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os05t0105900-01)
Sequence	ATGGCCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTAC TCGCGCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCC GCGGGGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCT CCGCCCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGAT CATCTCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGAT AGGGTGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCA GAGAAGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGA TTCGCGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCA CCAAAAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAA CAGCAGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGA TCTCCTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGC CGTCGAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCC CCAATCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTA TCACCAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGG CTGACTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGC AGTAGATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGG GGTCGGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACT CCTCCAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGA GGAAGAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAAT TAA

Peptide Sequence

PEP ID	Os05t0105900-01
PEP Infomation	pep chromosome:IRGSP-1.0:5:317219:320666:1 gene:Os05g0105900 transcript:Os05t0105900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os05t0105900-01)
Sequence	MATKPRRRSPSLSSSSSTSYSRSPASPSSSPSRSRSPPRPAGGARSPSPPPPPPPPRKAS PPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADA EKALLYLDGGQIDGNVVKVRFALPPQQQRAAASPKALHPSPKRDVVDHNKVGPSAEKATK QQPRKPASPQRKPAPSPRRRSPPSRRVESPRCRPDSPPIRRRTAPSPIRHGGTPSRRPGS PIRRRSPSPPPRRLRSPRHLSPRRDRGSPIRRRSPLPRRRLTPPRRMWSPPRRPQSLRHR SRSPIHRPIRSPSRSISPRRGRGPPVRRGRSSSSYSDSPTPPRRGPRRVLRSRSPRRPLR GRSASSYSRSSSSSGSPIRN

Transcript Sequence

Transcript ID	Os05t0105900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:5:317219:320666:1 gene:Os05g0105900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Nucleotide-binding, alpha-beta plait domain containing protein. (Os05t0105900-01)
Sequence	CCAAACCCAAACCCATCCATCACCGCATCTCATCGTCTCCGTCTCCGTCTCCGGCGATGG CCACCAAGCCCCGCCGCCGCTCCCCGTCGCTCTCCTCCTCCTCCTCAACATCCTACTCGC GCTCCCCCGCATCGCCCTCCTCCTCCCCGTCGCGCAGCCGCTCCCCTCCCCGCCCCGCGG GGGGGGCCCGCTCGCCTTCGCCGCCGCCGCCACCGCCTCCTCCCAGGAAAGCGTCTCCGC CCCCTGAGTCCACCGTCCTCCATGTTGACCATCTCTCCAGGAACGTCAATGAGGATCATC TCAAGGAGATTTTTGAAAATTATGGTGAAGTCGTCAATGTGGAGCTCTCCATGGATAGGG TGGTCAATCTTCCCCGTGGGTATGGATATGTTGAGTTCAAGAATAGAGCTGATGCAGAGA AGGCTCTTCTTTACTTGGATGGTGGCCAAATTGATGGAAATGTTGTTAAAGTCAGATTCG CGCTTCCACCACAGCAGCAAAGAGCTGCTGCTTCTCCAAAAGCTCTTCACCCTTCACCAA AAAGGGATGTGGTTGATCATAATAAAGTTGGTCCTAGTGCTGAAAAGGCCACCAAACAGC AGCCCAGGAAACCAGCATCTCCTCAAAGAAAGCCAGCTCCATCTCCAAGAAGGCGATCTC CTCCAAGTCGAAGAGTTGAATCACCTAGGTGTAGGCCTGATTCTCCTCCAATTCGCCGTC GAACAGCTCCTTCTCCAATCAGGCATGGTGGAACTCCTAGCAGGAGACCAGGATCCCCAA TCAGAAGGCGCTCACCCTCTCCGCCCCCTCGAAGACTAAGATCACCAAGGCACCTATCAC CAAGAAGAGATCGGGGCAGTCCAATCCGCAGGCGCTCCCCATTGCCTCGTAGAAGGCTGA CTCCTCCAAGGAGGATGTGGAGTCCTCCCAGAAGACCACAGTCACTTCGCCATCGCAGTA GATCTCCCATTCACCGACCAATTCGCTCCCCTTCCAGATCGATTTCTCCACGCAGGGGTC GGGGTCCTCCTGTGCGCCGTGGACGGTCATCCTCATCGTATTCTGATTCACCTACTCCTC CAAGAAGGGGACCAAGAAGGGTGCTCAGAAGTCGCAGTCCTAGAAGGCCTTTAAGAGGAA GAAGTGCCTCTAGCTACAGCCGTAGTAGCAGCAGCTCAGGTTCCCCTATCCGCAATTAAA ACTCTTGGCATGGCATGGCATGGAATGGAATGGTGTGGTGATCCTGGTAGGTAAATCTTT CCGTCTCGTCCCTTTTTATCGCTGATTTTGTGTCTTTTTGTCTTTGCTGCTGCTGTTTTT GTTGTCAAGCTTTGGTTCTTCGTGTGAGTTTGGGGCTTTGCGCGATGGTGCATGCGTTCC CTACGATCAAGCTGGCACTGGAACATTTAGATATTGCTGGAAGTTAAACATTTTCAAGCT TCTTGGAGGCTCTGTCTGAACTCTGGATTTCTCCTCTTGGAGGGAGCGATGACTTATGCA TGTCAATGCTGCAGTAAATAAAGTGGAGTACATTAGTATTCTGTAGTAGCCTATTAAAGC ACAGATTTCTGTGGGTTGGGAATCCAGGAGCACCAACATTTACTGGTGAAATTGAATTCA CCACTCACTTGTCGAACCTGAAGGCAAGATTGACTTGACAATTTCTCTTTGTAATGGTTA TGTTTTGTTATCTACGTGGAGTTATTTTGGACATCT