Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os05t0105000-01
CDS Infomation

cds chromosome:IRGSP-1.0:5:267986:274638:-1 gene:Os05g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S- methyltransferase) (Hv-MMT1). (Os05t0105000-01)
Sequence

ATGGCCGCCGCCGCCGAGGTGGAGTCCTTCCTGGCGACGTGCGCGGCCTCCGGCGACGCG
GCGTACGGCGCAGCCAAGGCCGTGCTCGAGCGCCTCCAGGACCCCGCCTCCCGCCCCGAC
GCCCGCCGCCTCCTCGGCGCCGTCCGCCGCCGCTTCGCCGGCCCCGCCGCCGGGGAGGAA
TGCTTCCGCACCTTCCACTTCCGCATCCACGACGTCGTCCTCGATCCCCACCTCCGAGGA
TTCCAGCAGAGGAAGAAGCTAACGATGATGGAAATACCTAGCATTTTCATTCCTGAAGAC
TGGTCCTTCACTTTCTATGAGGGCCTCAATCGGCATCCAGATTCCATTTTCAGGGATAAG
ACAGTAGCTGAGCTGGGATGTGGCAATGGTTGGATATCCATTGCACTTGCAGAAAAGTGG
TCCCCTTCGAAGGTCTATGGACTGGATATAAACCCAAGAGCTGTCAAGATTGCATGGATA
AACCTTTACTTGAATGCACTAGATGACGATGGTCTCCCAATCTACGACGGGGAGGGGAAA
ACATTGCTGGATAGAGTAGAATTCTATGAATCTGATCTTCTCTCTTACTGCAGAGACAAT
AAAATTGAACTTGATCGCATTGTTGGATGCATACCACAGATTCTTAACCCAAATCCAGAA
GCAATGTCAAAGATCGTAACTGAAAATTCCAGTGAGGAGTTCTTGTATTCATTGAGTAAC
TACTGTGCTCTTCAGGGTTTTGTTGAGGACCAATTTGGCCTTGGGTTGATTGCTCGGGCT
GTTGAAGAAGGGATATCAGTCATAAAGCCTATGGGTATTATGATATTTAACATGGGTGGT
CGACCAGGACAAGGTGTCTGCGAACGACTATTTCGACGCCGTGGATTTCGGATCACAAAA
CTGTGGCAAACAAAAATTATGCAGGCTGCTGACACAGATATTTCAGCTTTAGTGGAAATT
GAGAAAAATAGCCGGCATCGCTTTGAGTTTTTCATGGATCTTGTTGGGGATCAGCCTGTC
TGTGCACGCACAGCTTGGGCATACATGAAATCTGGTGGTCGTATTTCACATGCTTTGTCA
GTGTATAGCTGTCAACTTCGCCAACCCAACCAGGTGAAGAAAATATTTGAGTTTCTTAAA
GATGGGTTCCATGAAGTCAGCAGCTCCCTGGATTTGTCTTTTGATGATGATTCTGTTGCT
GACGAAAAAATACCCTTCCTAGCATACCTAGCTAGTTTTTTGAAGGAGAATAAATACAAT
CCTTGTGAACCACCAGCTGGTTGTCTAAACTTCCGGAATCTTGTTGCTGGATTTATGAAG
AGCTACCACCATATCCCATTAACTCCTGATAATGTTGTTGTTTTCCCTTCCCGTGCTGTG
GCAATAGAAAATGCTCTTCGATTATTCTCACCAGCGCTTGCGATCGTTGATGAACATCTG
ACCAGACACTTGCCAAAGCAATGGTTAACTTCTTTAGCAATTGAGGGAAAAGCCAAAGAT
ACAGTTACTGTAATTGAGGCACCACGCCAATCTGATTTGTTGATTGAGTTGATCAGGAAA
CTGAAGCCTCAGGTGGTTGTTACTGGCATGGCTCAGTTTGAGGCTATCACAAGTGCTGCT
TTTGAGAACTTATTAAGTGTAACGAAGGATGTTGGTTCTCGGTTATTCATCGATATTTCA
GAGCATCTGGAGTTGTCTAGTTTGCCAAGCTCTAATGGTGTATTAAAATACCTTGCTGGA
AAGACCCTACCTTCCCATGCAGCTATACTATGCGGTTTAGTAAAGAATCAGGTTTATTCT
GATCTGGAGGTTGCTTTTGCCATTTCTGAAGATGCAGCTGTTTATAGGGCATTATCACAA
ACTATTGAGCTATTGGAAGGGCATACGTCTCAGATCAGCCAGCACTATTATGGTTGTCTT
TTCCATGAGCTACTGGCATTTCAAATTGCTGATCGGCATCCACAACAAGAAAGACTGCCT
GCAGAAGTGATACCTCAGAAGATGATAGGATTTTCAAGTTCAGCTATGTCTACCCTAAAA
GAAGCTGAATTTTTCATTCCTGACTCCAAAAAATCCAGTGTCATTCATATGGATTTAGAT
CGCAGCTTCTTGCCAGTGCCTTCTGCAGTGAATGCCTCCATTTTTGAAAGTTTTGTTAGG
CAGAACATTACTGAGTCTGAAACTGATGTCCGTTCCAGCATTCAGCAGCTGGTGAAAGAT
AGCTATGGTTTCCCAGCAGATGGTTGTTCTGAAATATTATATGGCAACACCTGTCTTGCA
CTCTTCAACAAGCTTGCCCTTTGCTGCATCCAAGACCAGGGCACCTTACTTTTCCCCTTG
GGCGCTAATGGTCACTATGTCTCAGCAGCAAAGTTTGTGAATGCAAATACGCTGACTATT
CCGACAAAGTTAGAATCAGGCTTCAAGATTGAACCACGGGTTCTAGCTGACACACTTGAG
ACAGTATCTAGGCCATGGGTTTATATTTCTGGCCCCACAATTAACCCTACTGGTTTCCTG
TACAGTGACAGTGATATTCAAGAGCTCCTTTCTGTTTGTGGTAAATATGGAGCTAGGGTA
GTAATAGATACCTCCTTCTCTGGTCTGGAATTCCAAACTGATGGCTGGAGTCGATGGAAT
TTGGAAAGATGTCTTTCTGCTGTGAATTGTCCAAAACCCTCGTTCTCTGTAGCTCTTCTC
GGAGAACTGTCCTTTGAGCTGACTGCTGCAGGGCATGACTTTGGGTTTCTGATTTTGAAT
GACTCATCCTTGGTTGACACATTTCACAGTTTCCCAAGCTTGAGTCGTCCCCACAGTACG
CTGAAGTACACTTTCAAAAAACTACTGGGCCTCAAGAATCAGAAGGATGAACACTTCTCC
AATCTCATTATGGAGCAGAAGGACACACTAAAGAGTCGTGCTGACCACTTGATAAAGACA
CTTGAGGGCTGTGGCTGGGATGTTGCTGGCAGTCATGGTGGCATATCGATGCTGGCGAAA
CCGACTGCCTACATCGGCAAAATAATCAAGGTGGATGGTTTTGATGGCAAGCTAGATGGC
TGCAACATCAAGGAAGCCATTCTCAGGTCCACCGGGTTGTGCATAAACAGCAGCTCATGG
ACAGGAATACCGGATCACTGTCGGTTCAGCTTTGCTCTGGAGAGCAGCGAATTCGAGCGT
GCAATGGGCTGCATAGTTCGCTTCAAGGAGTTGGTTCTTGGAAGCAAGGCTTTTCATCAG
ATCAATGGTAACTAA

Peptide Sequence

PEP ID

Os05t0105000-01
PEP Infomation

pep chromosome:IRGSP-1.0:5:267986:274638:-1 gene:Os05g0105000 transcript:Os05t0105000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S- methyltransferase) (Hv-MMT1). (Os05t0105000-01)
Sequence

MAAAAEVESFLATCAASGDAAYGAAKAVLERLQDPASRPDARRLLGAVRRRFAGPAAGEE
CFRTFHFRIHDVVLDPHLRGFQQRKKLTMMEIPSIFIPEDWSFTFYEGLNRHPDSIFRDK
TVAELGCGNGWISIALAEKWSPSKVYGLDINPRAVKIAWINLYLNALDDDGLPIYDGEGK
TLLDRVEFYESDLLSYCRDNKIELDRIVGCIPQILNPNPEAMSKIVTENSSEEFLYSLSN
YCALQGFVEDQFGLGLIARAVEEGISVIKPMGIMIFNMGGRPGQGVCERLFRRRGFRITK
LWQTKIMQAADTDISALVEIEKNSRHRFEFFMDLVGDQPVCARTAWAYMKSGGRISHALS
VYSCQLRQPNQVKKIFEFLKDGFHEVSSSLDLSFDDDSVADEKIPFLAYLASFLKENKYN
PCEPPAGCLNFRNLVAGFMKSYHHIPLTPDNVVVFPSRAVAIENALRLFSPALAIVDEHL
TRHLPKQWLTSLAIEGKAKDTVTVIEAPRQSDLLIELIRKLKPQVVVTGMAQFEAITSAA
FENLLSVTKDVGSRLFIDISEHLELSSLPSSNGVLKYLAGKTLPSHAAILCGLVKNQVYS
DLEVAFAISEDAAVYRALSQTIELLEGHTSQISQHYYGCLFHELLAFQIADRHPQQERLP
AEVIPQKMIGFSSSAMSTLKEAEFFIPDSKKSSVIHMDLDRSFLPVPSAVNASIFESFVR
QNITESETDVRSSIQQLVKDSYGFPADGCSEILYGNTCLALFNKLALCCIQDQGTLLFPL
GANGHYVSAAKFVNANTLTIPTKLESGFKIEPRVLADTLETVSRPWVYISGPTINPTGFL
YSDSDIQELLSVCGKYGARVVIDTSFSGLEFQTDGWSRWNLERCLSAVNCPKPSFSVALL
GELSFELTAAGHDFGFLILNDSSLVDTFHSFPSLSRPHSTLKYTFKKLLGLKNQKDEHFS
NLIMEQKDTLKSRADHLIKTLEGCGWDVAGSHGGISMLAKPTAYIGKIIKVDGFDGKLDG
CNIKEAILRSTGLCINSSSWTGIPDHCRFSFALESSEFERAMGCIVRFKELVLGSKAFHQ
INGN

Transcript Sequence

Transcript ID

Os05t0105000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:5:267986:274638:-1 gene:Os05g0105000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Methionine S-methyltransferase (EC 2.1.1.12) (AdoMet:Met S- methyltransferase) (Hv-MMT1). (Os05t0105000-01)
Sequence

TCCGCCTGTTTTAGTTTTCCTCCTTTCCACATCTCATCCATCGATTCATCCGATCCGACT
CCGACCTAACCAATCCAATGGCCGCCGCCGCCGAGGTGGAGTCCTTCCTGGCGACGTGCG
CGGCCTCCGGCGACGCGGCGTACGGCGCAGCCAAGGCCGTGCTCGAGCGCCTCCAGGACC
CCGCCTCCCGCCCCGACGCCCGCCGCCTCCTCGGCGCCGTCCGCCGCCGCTTCGCCGGCC
CCGCCGCCGGGGAGGAATGCTTCCGCACCTTCCACTTCCGCATCCACGACGTCGTCCTCG
ATCCCCACCTCCGAGGATTCCAGCAGAGGAAGAAGCTAACGATGATGGAAATACCTAGCA
TTTTCATTCCTGAAGACTGGTCCTTCACTTTCTATGAGGGCCTCAATCGGCATCCAGATT
CCATTTTCAGGGATAAGACAGTAGCTGAGCTGGGATGTGGCAATGGTTGGATATCCATTG
CACTTGCAGAAAAGTGGTCCCCTTCGAAGGTCTATGGACTGGATATAAACCCAAGAGCTG
TCAAGATTGCATGGATAAACCTTTACTTGAATGCACTAGATGACGATGGTCTCCCAATCT
ACGACGGGGAGGGGAAAACATTGCTGGATAGAGTAGAATTCTATGAATCTGATCTTCTCT
CTTACTGCAGAGACAATAAAATTGAACTTGATCGCATTGTTGGATGCATACCACAGATTC
TTAACCCAAATCCAGAAGCAATGTCAAAGATCGTAACTGAAAATTCCAGTGAGGAGTTCT
TGTATTCATTGAGTAACTACTGTGCTCTTCAGGGTTTTGTTGAGGACCAATTTGGCCTTG
GGTTGATTGCTCGGGCTGTTGAAGAAGGGATATCAGTCATAAAGCCTATGGGTATTATGA
TATTTAACATGGGTGGTCGACCAGGACAAGGTGTCTGCGAACGACTATTTCGACGCCGTG
GATTTCGGATCACAAAACTGTGGCAAACAAAAATTATGCAGGCTGCTGACACAGATATTT
CAGCTTTAGTGGAAATTGAGAAAAATAGCCGGCATCGCTTTGAGTTTTTCATGGATCTTG
TTGGGGATCAGCCTGTCTGTGCACGCACAGCTTGGGCATACATGAAATCTGGTGGTCGTA
TTTCACATGCTTTGTCAGTGTATAGCTGTCAACTTCGCCAACCCAACCAGGTGAAGAAAA
TATTTGAGTTTCTTAAAGATGGGTTCCATGAAGTCAGCAGCTCCCTGGATTTGTCTTTTG
ATGATGATTCTGTTGCTGACGAAAAAATACCCTTCCTAGCATACCTAGCTAGTTTTTTGA
AGGAGAATAAATACAATCCTTGTGAACCACCAGCTGGTTGTCTAAACTTCCGGAATCTTG
TTGCTGGATTTATGAAGAGCTACCACCATATCCCATTAACTCCTGATAATGTTGTTGTTT
TCCCTTCCCGTGCTGTGGCAATAGAAAATGCTCTTCGATTATTCTCACCAGCGCTTGCGA
TCGTTGATGAACATCTGACCAGACACTTGCCAAAGCAATGGTTAACTTCTTTAGCAATTG
AGGGAAAAGCCAAAGATACAGTTACTGTAATTGAGGCACCACGCCAATCTGATTTGTTGA
TTGAGTTGATCAGGAAACTGAAGCCTCAGGTGGTTGTTACTGGCATGGCTCAGTTTGAGG
CTATCACAAGTGCTGCTTTTGAGAACTTATTAAGTGTAACGAAGGATGTTGGTTCTCGGT
TATTCATCGATATTTCAGAGCATCTGGAGTTGTCTAGTTTGCCAAGCTCTAATGGTGTAT
TAAAATACCTTGCTGGAAAGACCCTACCTTCCCATGCAGCTATACTATGCGGTTTAGTAA
AGAATCAGGTTTATTCTGATCTGGAGGTTGCTTTTGCCATTTCTGAAGATGCAGCTGTTT
ATAGGGCATTATCACAAACTATTGAGCTATTGGAAGGGCATACGTCTCAGATCAGCCAGC
ACTATTATGGTTGTCTTTTCCATGAGCTACTGGCATTTCAAATTGCTGATCGGCATCCAC
AACAAGAAAGACTGCCTGCAGAAGTGATACCTCAGAAGATGATAGGATTTTCAAGTTCAG
CTATGTCTACCCTAAAAGAAGCTGAATTTTTCATTCCTGACTCCAAAAAATCCAGTGTCA
TTCATATGGATTTAGATCGCAGCTTCTTGCCAGTGCCTTCTGCAGTGAATGCCTCCATTT
TTGAAAGTTTTGTTAGGCAGAACATTACTGAGTCTGAAACTGATGTCCGTTCCAGCATTC
AGCAGCTGGTGAAAGATAGCTATGGTTTCCCAGCAGATGGTTGTTCTGAAATATTATATG
GCAACACCTGTCTTGCACTCTTCAACAAGCTTGCCCTTTGCTGCATCCAAGACCAGGGCA
CCTTACTTTTCCCCTTGGGCGCTAATGGTCACTATGTCTCAGCAGCAAAGTTTGTGAATG
CAAATACGCTGACTATTCCGACAAAGTTAGAATCAGGCTTCAAGATTGAACCACGGGTTC
TAGCTGACACACTTGAGACAGTATCTAGGCCATGGGTTTATATTTCTGGCCCCACAATTA
ACCCTACTGGTTTCCTGTACAGTGACAGTGATATTCAAGAGCTCCTTTCTGTTTGTGGTA
AATATGGAGCTAGGGTAGTAATAGATACCTCCTTCTCTGGTCTGGAATTCCAAACTGATG
GCTGGAGTCGATGGAATTTGGAAAGATGTCTTTCTGCTGTGAATTGTCCAAAACCCTCGT
TCTCTGTAGCTCTTCTCGGAGAACTGTCCTTTGAGCTGACTGCTGCAGGGCATGACTTTG
GGTTTCTGATTTTGAATGACTCATCCTTGGTTGACACATTTCACAGTTTCCCAAGCTTGA
GTCGTCCCCACAGTACGCTGAAGTACACTTTCAAAAAACTACTGGGCCTCAAGAATCAGA
AGGATGAACACTTCTCCAATCTCATTATGGAGCAGAAGGACACACTAAAGAGTCGTGCTG
ACCACTTGATAAAGACACTTGAGGGCTGTGGCTGGGATGTTGCTGGCAGTCATGGTGGCA
TATCGATGCTGGCGAAACCGACTGCCTACATCGGCAAAATAATCAAGGTGGATGGTTTTG
ATGGCAAGCTAGATGGCTGCAACATCAAGGAAGCCATTCTCAGGTCCACCGGGTTGTGCA
TAAACAGCAGCTCATGGACAGGAATACCGGATCACTGTCGGTTCAGCTTTGCTCTGGAGA
GCAGCGAATTCGAGCGTGCAATGGGCTGCATAGTTCGCTTCAAGGAGTTGGTTCTTGGAA
GCAAGGCTTTTCATCAGATCAATGGTAACTAAATGAAATTTCCCATCGTCGTGGAAACTG
AATCCTGAAGAAATGTAGCCACTACATACATATTATTATCCATTGTTAGCCTGTCCTGTT
CGGGGCTGATTGAACATTTTTGTGCTTAGAAAAAGAATAATGAGCACAGGAAGGCTGGTA
TGAATGTAGTAGCAAACTGGAATTAAGTCTGAACGACGTATTGGCATGGCATATTTCTCC